Petromyzon marinus (sea lamprey): 116940977
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Entry
116940977 CDS
T09614
Symbol
PTPN23
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 23 isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03250
Viral life cycle - HIV-1
pmrn03272
Virion - Hepatitis viruses
pmrn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116940977 (PTPN23)
03272 Virion - Hepatitis viruses
116940977 (PTPN23)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116940977 (PTPN23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116940977 (PTPN23)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmrn04147
]
116940977 (PTPN23)
Membrane trafficking [BR:
pmrn04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
116940977 (PTPN23)
Exosome [BR:
pmrn04147
]
Exosomal proteins
Proteins found in most exosomes
116940977 (PTPN23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
116940977
NCBI-ProteinID:
XP_032807343
UniProt:
A0AAJ7SXA4
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Position
10:complement(10060255..10074286)
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AA seq
880 aa
AA seq
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MATFVTVPLKKSYELDVAKPLARFILDTYGPGHDFAKSLEELNALRKSAACRPLDKHEAS
LDLLERYYDQLCAIEPKLPINEGQNPINFTWRDAFDKGSLFGGSAKLTIPRASYEKICVL
FNIGALMSQIAGELNLDSDDGMKTAAKYYQQASGCFLQIKESVLSALNREPTVDISPDTV
GALSVIMLAQAQEVFYMKASADKMKDAIVAKLANQAADYYGDAFKQCQYKEQLPKYFYFQ
EVLPLLAAKHCIYQATAQLHQSNVAKQQKKFGEEIARLQHATDLVKTVTSRYDEYISVKD
LSDKISRALTAAKKDNDFIYHDRVPDIKDLEAIGKATLVKPLQLASPMSPRFVDLFEKMV
PLAVNNAVTAYNQRKADLVNRSVMQMREATTLLNGILASLNLPAALEDLSGDTVPPSILE
KSVAIVEKGGLDKIDYLMKNLPESLQRNREILNEAMKMLSEEEVTDNDLRTKFQQKWQRT
PSNDLYKPLRAEGDKYRHLIDNAVNADGVVKQKYNEHRDYIAMLSQPQQELNAAIPSANP
AASLAGSETVQILRSLLSDLDTVKGGREALEGELRNVDSDMTGRFLGALAQDGALNEEDL
SRTELERLYGPYTQRVTESIRRQEELLKDLQVRHQEFAQQKQASTESNLRDEVLRKLAAA
HDGFMQLLGNLEEGNKFYGDLTEILLKFQSKCNDIVFARKTEREELLKDIQQKIAKEPSA
PVLGVPAYQTSTEKPPQPLPRTTAPSKPQAPPRPPPPVPQPTLSAAPAPAPVAAASTPST
VSMAQGPPFASYPGYPGAVPMPMGFNPYTTYTQYAMPPYGAQPQPGQAYPQGQAQYVQPQ
MPGYPQGQMPTYTHPYGYPQQPYPYQQAYNPNNPNPYSQQ
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgttcgtgacggtgccgctgaagaagtcgtacgagctggacgtggccaagccg
ttggcccgcttcatcctggacacgtacggcccgggccacgacttcgccaagagcctcgag
gagctgaacgcgcttcgcaagagcgccgcgtgccgacccctggacaagcacgaggcgtcg
ctcgacctcctcgagaggtattatgatcagctctgtgccattgagccaaagttgcccatt
aatgaaggccagaacccaattaatttcacatggagggatgcctttgacaaaggatcactg
tttgggggctcagcaaaacttaccatcccgcgggccagctatgagaagatttgtgtacta
ttcaatattggtgctctcatgagccagatcgctggtgagctcaacctagacagtgatgat
ggcatgaaaactgctgccaagtactaccagcaagcgagcggctgctttttgcaaatcaag
gagtctgtgctgagtgcgctgaaccgcgagccaacggtggacatctcccctgacacagtt
ggagcgctcagtgttatcatgctggcacaggcccaagaggtgttctacatgaaggccagc
gctgacaaaatgaaggacgcgattgttgcaaaactggctaatcaagcagctgactattat
ggagatgccttcaagcagtgccaatacaaggagcagctgcctaagtatttttatttccag
gaggtgcttcctcttctggctgccaagcactgcatctaccaggccacagcccagctacac
cagtctaacgtggccaaacagcaaaagaaatttggagaggagatcgcaagactccagcac
gcaacggaccttgtgaaaacggtcacgtcgcgttacgatgagtacattagcgtcaaagat
ctgtctgacaagatcagccgggcgctaactgcagccaagaaggacaatgacttcatctac
cacgatcgggtgccagacattaaggacctggaagctattggcaaggccacccttgtgaag
cccctgcagctcgccagccccatgagcccccgatttgttgacctgtttgaaaagatggta
ccactggctgtgaacaatgctgtcactgcatacaaccaaaggaaggctgatcttgtcaac
agatctgtaatgcaaatgagggaggcaaccactctgctcaatggaatcttagcatcgctg
aacctgccagctgccttagaagacttgtcaggtgacacagtgccaccttccattctggag
aagtccgtggctatcgtcgaaaaaggggggctggataaaattgactacttgatgaagaac
cttcctgagtctctgcaacgtaatcgtgagattctaaatgaggctatgaagatgctgagt
gaggaggaggtcacagacaatgacctaagaactaagtttcagcagaagtggcagcgcaca
ccctcgaatgacctctacaagccgctgcgtgcagagggtgacaagtaccgtcaccttatt
gacaatgccgtgaacgcggatggggtcgtcaagcagaagtataacgagcaccgggactac
atcgcgatgctcagtcaaccacaacaggagctcaacgctgccattccatctgccaatcct
gcagcttctctcgcaggcagcgagacggtgcagattttgcgctcgctgctgtccgacctg
gacaccgtgaagggtggacgagaggccctggagggtgagctgcgcaacgtcgactcggac
atgacgggtcgcttcctgggggcactggctcaggacggggccctcaacgaggaggacctc
tcgcgcactgagctggagcggctgtacgggccgtacacgcagcgtgtcacagagagcatt
cggcgtcaggaggagctactcaaggacctgcaggtgcgccaccaggagttcgctcagcag
aaacaggcgagcacagagtcaaacttgcgggacgaagtcctgcggaagctggctgccgcc
catgacggcttcatgcagctcctgggaaacctggaggaaggaaacaagttttacggtgac
ctgacggagatattgcttaaattccagagtaaatgtaatgacatagtatttgctcgcaaa
actgagagggaagaactgctcaaagatatccagcagaagattgccaaagagccatctgcc
ccagtcctgggtgtgccagcatatcagacatcaactgagaagcccccccagcctctaccc
cgcactactgcgccaagcaagcctcaggcaccgccacgtccaccccctccggttcctcaa
ccgactctcagtgcggccccagctcctgctccagtcgctgcagcgagtacaccctccaca
gtctccatggcacagggacccccgttcgcatcctaccccggctacccaggtgctgtgccc
atgccaatgggattcaatccttatacaacctacacccaatacgcaatgccaccctacggt
gcccaacctcagccaggccaggcatatccccagggacaggcacagtacgtacagccccaa
atgcctggctatccgcagggccagatgcccacatacactcatccatacggatacccccag
cagccctacccttaccagcaggcatacaatcccaataacccgaatccttacagccaacag
tga
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