Petromyzon marinus (sea lamprey): 116940989
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Entry
116940989 CDS
T09614
Name
(RefSeq) tumor necrosis factor receptor superfamily member 16-like isoform X1
KO
K02583
tumor necrosis factor receptor superfamily member 16
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
pmrn04010
MAPK signaling pathway
pmrn04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
116940989
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116940989
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116940989
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
pmrn04050
]
116940989
04090 CD molecules [BR:
pmrn04090
]
116940989
Cytokine receptors [BR:
pmrn04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
116940989
CD molecules [BR:
pmrn04090
]
Proteins
116940989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
TNFR_16_TM
Death
TPR_21
Motif
Other DBs
NCBI-GeneID:
116940989
NCBI-ProteinID:
XP_032807384
UniProt:
A0AAJ7SXN4
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All DBs
Position
10:10524741..10547147
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AA seq
475 aa
AA seq
DB search
MKQGLPAAAAAATTTAVASGSVLFLLLLLRLGTPVTGAPTCPSNEFTGDGRCCQECGPGW
GMAESCRGRNNTQCEPCHDSLTFSSSWSHTDRCLPCRTCPGGTRVRSPCTEADDTVCECD
DGLHARDADGACVPCRLCPPGTGVVSQCSPDGDATCELCPPGFYSEWSSNTEPCMPCASC
SDDQVELKGCTPSADTICFDKNPGIPDLLPKGRGTMSPRGPEPDELDLPEWDVDGGGGAG
TAWAAGAPGPRLREPEREEEGGPFGVANSTHGTPASSQEPLGGQSRDIIPVYCSIMAAVV
VGLVAYVIFKRWHSCKNVQGSKARGEYSAAADGEKQHQDSGVFVDTHGAQPPTASGGGGG
ASGSDGGGGERGRVGEAGKWNYAGLPAHTRDEVEELLSADEEGGGGWRGLAAALGYDADE
TEALAGEERPAQALLVAWAALPGSTQDTLVDALGRLQRGDVIARLRQETTAMSVV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggggcttccagcagcagcagctgctgcaaccaccacagccgtggccagcggc
agcgtcttgttcctgctgctactgctgcgactcgggaccccggtgaccggggcgcccacg
tgccctagcaatgagttcacgggcgacggccgctgctgccaggagtgcgggccaggctgg
gggatggccgagagttgccgcggacgcaacaacacgcagtgcgagccctgtcacgacagc
ctgaccttctcgtcgtcgtggagtcacacggaccgttgcctgccgtgccgcacgtgcccc
gggggcacgcgcgtgcgctcgccctgcacggaggcggacgacacggtgtgcgagtgcgac
gacgggctgcacgcacgcgacgccgacggcgcgtgcgtgccctgccgcctgtgcccgccg
ggcacgggcgtcgtgtcgcagtgctcgccggacggcgacgccacctgcgagctctgcccg
cctgggttttactcggagtggagcagcaacaccgagccgtgcatgccgtgcgccagctgc
tctgacgaccaggtggagctcaaggggtgcacgccgagcgccgacaccatctgcttcgac
aagaaccccggcattccggacctgctgccgaaaggtcgcggcacgatgtccccccgcggc
cccgagccggacgagctcgacctccccgagtgggatgttgacggcggcggcggcgctggg
acggcgtgggctgcgggggccccggggccgcgcctgagggagccggagcgcgaggaggaa
gggggccccttcggcgtggccaacagcacgcacggcacaccggccagcagccaggaaccg
ctgggcgggcagtcccgcgacatcatccccgtctactgctccatcatggcagctgtcgtg
gtggggctggtcgcctacgtcatcttcaagcggtggcacagctgtaagaacgttcaaggc
agcaaagcgcgcggcgagtacagcgcggccgccgacggcgagaagcagcaccaggacagc
ggagtgttcgtggacacgcatggcgcgcagccgcccactgcctctggtggcggcggcggc
gccagcggtagcgatggcggcggcggagagagagggcgcgtgggcgaggccggcaagtgg
aactatgcggggctgccggcgcacacgcgcgacgaggtggaggagctgctttctgccgac
gaggagggcggcggcggctggcgggggctggcggcggcgctcggctacgatgccgacgag
acagaggcactggccggggaggagcggcccgcgcaggccctcctggtggcatgggcggcg
ctcccgggttccacgcaggacacgctcgtcgatgcgctgggccggctgcagcgcggggac
gtcatcgcccgcttgcgccaggagaccacggcgatgtccgtggtgtga
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