Petromyzon marinus (sea lamprey): 116941036
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Entry
116941036 CDS
T09614
Name
(RefSeq) transcription termination factor 1-like
KO
K15225
transcription termination factor 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmrn03021
]
116941036
Transcription machinery [BR:
pmrn03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
116941036
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_4
Motif
Other DBs
NCBI-GeneID:
116941036
NCBI-ProteinID:
XP_032807495
UniProt:
A0AAJ7SZ81
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All DBs
Position
10:complement(12117336..12123523)
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AA seq
704 aa
AA seq
DB search
MEMKKHKEKCQRKRDARGNESSRLEEAPNDVDLDQVKICQKKRCVKHRAESRSDDAQTKT
SDGGSRCDSSRVARDGGEHHCKHGERREGKSRRRSEEEATVAPQRREDVRACSRSGDAES
KGVKRKKKMKNADDNLTPTWQREEGALQSDREEETAKSEKKSSRKRKQTAADGGSHLEDI
EPPPVEERPRKKRKRREMSIAVPDGHASSEGTVVSESCPMESPVNPEPSSSSNRKKKKKK
KKKMAKAYQSGGDQGGVIAQNTAGTRSKKHGKKKKRRDLEEGFPIEPLPTLRTENTVTNE
HRQINVSHTEEVVDEVDQEMGDEEEEEEEVRHLENYDYQVKFMSKLIPGFARRVQVHINR
ALKYDYHRFKEFEKRGIKVRFGRFSKAEVEQLHMNVRDFIRDHGAFTDPQKLFMPSYFPA
EKKLILKYRLQNNFFYYLLRGISRPLKQILERGMTLYECEDLKSGRYSEEELKQLTQLTR
ELGPHWTPISRIMQRRKKNLLIKFNLMTDGSAKGVWSDGEVESLLQAMKDYLQAQQQQQH
NGVDQLNTDSEHTIRILQRFLYSDIPWRHVSAKVNNRNSYQCRAKWMAVLCNRLTKITPL
VYGWQGDTSRIQLIQSLYNLEVEDSADIDWDGIGQKMKIPPWLLQRKLFGLKFFHVPNWR
NKTFGEIIDVLHDIYLPQLLKKHDIGQLSAEVEPTEVLLKQLFN
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaagaaacacaaggagaaatgccaacggaaaagagatgcgcgtggaaatgaa
tcgtcacgcctggaagaagctccgaatgacgtggacttggaccaagtcaagatttgtcaa
aagaaaagatgtgtaaagcacagagcggaatccaggagtgacgatgcccaaacgaaaacg
tctgatggtggttcgcggtgcgattcttctcgggttgcgcgggacggcggcgagcaccat
tgcaagcacggtgagcggagggaaggcaaatctcgacgacgaagtgaggaggaggcgaca
gttgcacctcagcggagagaagacgtgcgtgcctgttccagaagcggcgacgccgagagc
aagggagtgaaaaggaagaagaaaatgaaaaacgctgacgataatttgacgccaacttgg
caacgagaagaaggggctttgcagtcggaccgtgaagaggaaactgcgaagagtgagaag
aaatcgagcaggaaaaggaaacaaactgcagctgatggaggaagtcatttagaagacatt
gagcctcctcctgtggaggaaagacctcgcaaaaagagaaaacgcagggaaatgagcatt
gcggtgcctgacggacatgcttcttctgaagggacagttgtgtcagaaagttgtccgatg
gaatcgcccgtgaatcccgagccatcctcaagctccaacaggaagaagaagaagaagaaa
aagaagaagatggcaaaggcgtaccaatctggaggtgaccagggtggtgtaatagcacag
aatactgcgggcacaaggagcaagaagcatggcaagaagaaaaaacggcgtgaccttgag
gagggcttccccattgagccacttcccacattgagaaccgagaacactgtcaccaatgaa
catcgccagataaacgtgtcccacactgaagaggttgttgatgaagtagatcaagaaatg
ggggatgaggaggaagaggaggaagaggttaggcatctcgagaattatgattaccaggtc
aagttcatgagtaaattaattcctggctttgcacgtagagtgcaagtgcatattaatcgt
gccctcaaatatgactatcatcgttttaaggagtttgaaaagagaggaatcaaggtccgg
tttgggcgtttcagcaaggcagaggtggaacagctgcacatgaacgtgcgcgactttatt
cgtgaccacggtgccttcacggatccacagaaactattcatgccctcgtacttccctgcg
gagaagaaattaatcttaaaataccgattgcagaacaacttcttctattacctgcttcgg
ggtatttcaagaccactgaagcagatattagaacgagggatgactttatatgaatgcgaa
gaccttaaatctggaaggtactcggaagaagagttgaagcagctgacacagctcacccgg
gagttaggtccacattggactcccatttcacgaatcatgcagcgcaggaagaagaacctg
ctcatcaaattcaatttgatgaccgatggttcggccaagggcgtttggagtgatggggag
gttgagagtctgctgcaggcaatgaaggactacctgcaagctcagcagcagcagcagcac
aatggggtggaccaactcaacacagattccgaacatacgatccgtatcctgcagagattt
ctctactccgacattccctggagacacgtttccgccaaagtgaacaacagaaattcttac
cagtgcagggcaaaatggatggccgttctttgcaatcggttgacaaagatcacaccactg
gtgtatggatggcaaggcgatacatccagaatacaactcattcagagtttgtacaacttg
gaagttgaagacagtgcggatattgactgggatggaatcggccaaaaaatgaagatacca
ccatggttgctacaaaggaagttgttcggactgaaatttttccacgttcccaactggaga
aataagacctttggagagataattgatgtcctgcacgacatctatctacctcagcttctg
aagaaacatgacattgggcagttaagcgcagaagtggaaccaacagaagttctcctcaaa
caactttttaattaa
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