Petromyzon marinus (sea lamprey): 116941052
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Entry
116941052 CDS
T09614
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmrn01002
]
116941052
Peptidases and inhibitors [BR:
pmrn01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
116941052
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
Motif
Other DBs
NCBI-GeneID:
116941052
NCBI-ProteinID:
XP_032807535
UniProt:
A0AAJ7SXT7
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Position
10:12938057..13008137
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AA seq
1171 aa
AA seq
DB search
MSPLRATPAAGGGAQLRGSTVALLVLLLCCMEELASCQRAGGRRDSTRRAPASLRHKRPQ
ANPMPASLYGSDVPDLNLTCAMEIAFLIDSSESAKGSNYNFEQKFVLDFTAMLQREAALA
GILSWRIGLLQYSSTVRVEQMLRDWQGPDDFSARVRQMTYIGHGTYTAYALGNLTELYDE
QARAGSVRVAVLVTDGVDHPRGPDPAQAAGALRAQGTRLFVLGLSNVARQPDNAARLRLM
ASAPATRYVHDLRHPATLGTLVAELNTLADEECPKQPACQCEKGERGAAGIPGRKGKPGR
DGAHGERGQKGDAGVPGTRGADGAEGRPGFSGEKGDRGQCGAPGEKGDRGPDGPSGPRGP
EGPKGPPGPTGEQGLEGIQGPKGERGLPGPPGVQGEAGVGHPGPKGDFGFPGRAGPAGPA
GIGEPGLPGAPGPQGQPGERGLAGEGLQGAKGDRGNDGPRGPLGPAGSGQKGDKGELGFP
GPAGSTGLSGKGLPGDKGDQGPRGLPGPRGPPGEGIPGPKGIQGLRGDLGPSGIGLEGPP
GPKGELGTPGLNGLPGQRGDDGADGQKGETGLPGPRGPDGPPGIGLQGEKGDHGPRGLKG
FPGSPGPVGVTGPKGQPGLPGVVGMPGPAGHGIVGPKGEPGHAGPQGLIGEIGIGLQGPK
GERGFPGPIGPQGGKGEGYPGPQGLQGLPGLRGEPGLEGVGLPGSKGDTGIRGLPGGRGP
PGEGQPGPKGNVGRQGPPGPHGPSGEGIQGAKGEQGFQGLPGPRGPLGEGIPGPKGDRGL
HGEKGRKGDAGSSGEKGSLGAMGRVGQKGDPALTRQEIIKLIKEICGCGVKCRQRPLELM
FVIDSSESVGPHNFQIIKEFVSALTEKLPIGRNATRVGLVLYSREVQLEFGLGRHASAAE
VRRAVTAMAYLGEGTYTGTALQRAVAEGFAGARHGVPKVALVLTDGETDPREPYPLGQAV
RGAQVAAVEVYAIGIVNRSDPGHAAFVGELNLIASDPDEEHVYLIDDFNTLPALEMKLVS
QLCEDEDGTPFSPAPKPPVRTPALPATAHNGRSPEERGKRMQDRNGEPGHFGNTVEAVTA
TSLLVTSVTPESFLLTRRPPTPDHALRCQVQLDQGPCRNFISRWYYNGDANACGKFWYGG
CEGNDNNFLTSEECQRTCVGSHAKGLGPDGR
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtccccgttaagggccacgcctgccgcgggcggcggtgcgcagcttcgcggctccacg
gtggcgctcttggtgctgctgctgtgctgcatggaggagctggcgagttgccagcgggcg
ggcggccggcgagattcgacaaggagggcccccgcatcgttgcgccacaagaggccccag
gcaaacccgatgcccgcttcgttgtacgggagcgacgtcccagacctgaacttgacctgt
gccatggagatcgccttcctcatcgacagctcggagagcgccaagggcagcaactacaat
ttcgagcagaagttcgtgctggacttcacggcgatgctgcagagggaggccgccctcgct
ggcatcctcagctggaggatcggactcctccagtacagcagcacggtgcgcgtggagcag
atgctgcgggactggcagggaccggacgatttctccgcccgggtgcgccagatgacgtac
atcggacacggcacgtacacggcgtacgcgctgggcaacctcacggagctgtacgacgag
caggcacgggccggctcggtgcgagtcgccgtcctcgtgacggacggcgtcgaccacccg
cgcggccccgacccggcgcaggcggcgggggcgctgcgcgcgcagggcacgcggctcttc
gtgctgggcctgagcaacgtggcgcgccagccggacaacgcggcccgcctgcggctcatg
gcgagcgcgccggccacgcgatacgtgcacgacctgcgccacccggccacgctgggcact
ctcgtcgccgagctgaacacgcttgccgatgaagagtgtcccaagcagccggcgtgccag
tgcgagaaaggcgagcgtggagctgcgggaatcccgggtaggaaaggaaaaccgggaagg
gatggtgcccatggtgagagaggacaaaagggcgacgccggggtgccaggaacccgtgga
gctgatggcgcggagggccggccaggattttcaggagagaagggtgacaggggtcagtgc
ggagcccccggcgagaagggagacaggggaccagacgggccgagtggcccaaggggaccc
gaaggcccgaaggggcctccaggacctacaggtgaacaaggcctcgaaggcatccaggga
ccaaagggagagaggggcttgcctggccctccaggtgtgcagggggaggcgggcgttgga
cacccaggacctaagggcgactttggtttcccaggcagagccggacccgccggccccgct
gggatcggggaacctgggctaccgggtgcaccaggaccgcagggacagccgggcgagaga
ggcctcgcaggggaaggtttgcagggcgccaagggtgaccgagggaacgatggcccaagg
ggccccttggggccagcgggttccggacagaagggtgacaagggggagctggggttccca
ggacctgcagggtccacggggctgtcaggaaaaggtcttccaggggacaagggagatcaa
ggccccaggggcttgccgggcccaagaggtcctcctggtgaaggcattcctggacccaag
gggatccaaggcctgcggggagacctgggaccctccggcatcggcctggagggcccgccg
ggccccaagggagaactgggaactcccggcctcaacgggttgcctgggcagcgtggagac
gatggcgctgacgggcaaaagggagagactggtttgcctgggccccgcgggccagatggg
ccaccagggattggcctgcaaggggaaaagggagaccatggcccaaggggactaaagggg
tttccgggcagcccaggcccggtgggagtcacggggcccaagggccagccagggctgccg
ggggtcgtcggcatgccagggcccgcgggccacggcatcgtgggcccaaagggcgagccc
ggccatgctgggcctcaggggctcataggtgagatcgggattggcctgcagggaccaaag
ggggagagaggattcccaggtccgatcggaccccaaggtggcaagggagagggctaccca
ggcccccagggcctgcagggcctgccgggactcaggggcgagccgggactcgaaggcgtc
gggctgcccggttcaaagggggacaccgggatccggggattaccgggaggtcggggcccc
ccaggagaggggcagcctggtccaaagggaaacgtcggccggcagggcccacctgggccc
catggaccgtctggggagggcatccagggagccaagggggagcagggattccagggcctc
cccggaccacgcgggcctctcggggagggtatccccggaccaaagggcgaccgaggtctg
cacggagagaagggtcgcaagggagatgcgggcagctccggtgagaaggggtccctcggt
gctatgggcagggtcggccagaaaggcgatccggcgctgactaggcaagaaatcattaag
ttgatcaaagagatatgtggctgtggagtgaagtgccggcagcgtccgctcgagctcatg
tttgtgatcgacagctccgagagcgtgggcccccacaacttccagatcatcaaggagttt
gtgagcgcgctcactgagaagctgcccattggacgcaacgccacccgggtgggcctggtg
ctgtacagccgggaggtgcagttggagttcgggctgggccggcacgcgagcgccgcggag
gtgcgccgcgccgtcaccgccatggcctacctgggcgagggcacctacacgggcacggcg
ctgcagcgcgccgtcgccgagggcttcgcgggcgcccggcacggcgtgcccaaggtggcc
ctggtgctgacggacggcgagacggacccgcgcgagccctacccgctgggacaggcggtg
cgcggggcgcaggtggcggccgtcgaggtgtacgccatcggcatcgtgaaccgcagcgac
ccgggccacgccgccttcgtcggggagctcaacctcatcgcgtccgacccggacgaggag
cacgtctacctcatcgacgacttcaacacgctgccagcactggagatgaagctcgtgagc
cagctgtgcgaggatgaggacggcacgcctttctcgccggcaccaaaacctcccgtgcgg
actccagccctcccggcgacggcgcacaatggcaggagcccggaggagcgcgggaaacgc
atgcaggatcgaaacggggagccgggacactttggcaacaccgtcgaggcggtcacggcc
acctcgttgctcgtgacctccgtgaccccggagtccttcctgctgacccggcgacccccg
accccggaccacgcactcaggtgccaggttcagttggaccaggggccctgccgtaatttc
atctcccgctggtactacaacggcgacgccaacgcctgcgggaagttctggtacggaggc
tgcgaaggaaacgacaacaacttcttgacctccgaagagtgccaaaggacgtgcgtcggg
tctcatgccaaagggttggggccagatggacggtga
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