KEGG   Petromyzon marinus (sea lamprey): 116941081
Entry
116941081         CDS       T09614                                 
Name
(RefSeq) integrin beta-3-like isoform X1
  KO
K06588  integrin beta 5
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn04145  Phagosome
pmrn04148  Efferocytosis
pmrn04510  Focal adhesion
pmrn04512  ECM-receptor interaction
pmrn04810  Regulation of actin cytoskeleton
pmrn04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116941081
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    116941081
   04148 Efferocytosis
    116941081
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116941081
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116941081
   04810 Regulation of actin cytoskeleton
    116941081
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmrn04131]
    116941081
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:pmrn04515]
    116941081
Membrane trafficking [BR:pmrn04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    116941081
Cell adhesion molecules [BR:pmrn04515]
 Integrins
  Integrin beta subunits
   116941081
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt I-EGF_1 Integrin_B_tail PSI_integrin EGF_integrin EGF_2 EGF_TEN EGF_Teneurin
Other DBs
NCBI-GeneID: 116941081
NCBI-ProteinID: XP_032807588
UniProt: A0AAJ7SZT0
LinkDB
Position
10:complement(14117943..14149714)
AA seq 864 aa
MHTSGFHRSISAVNRRLCKLHTRTRSELLSCPSIGGAGPSRRWLRTRLPSSSLCEPTGEG
AGAGGLCAGGGALRCSECLLLHPSCAWCSQKDFPGGRSRCDLQERLLHSGCPADLVEAPR
SQVQLIQALPLSEKPRTVETGKTRETRESPSGVVQIYPQEVSLSLRPGDPATVHVQVRQV
EDYPLDLYYLMDLSLSMKDDLDNIRVLGTQLEAAMARLTSKLRLGFGSFVDKPVSPFTNT
APAYLRNPCLRFKRFPVCGTPFGFRHVLALTERAASFIAEVQRQNVSRNNDAPEGGFDAI
LQASVCGEQIGWRGGATHLVVFATDAGSHLALDGRLAGLAAPHDGRCHLDPNNSYARSSA
MDYPSLALLGEKLSENNVNLIFAVTRQHYALYRSYAHLLPGTTAGILANDSSNIIQLIVS
AYNSIRSVVELEVWDQPEDVSVSFTATCQNGTVLPGQRRCADLRVGDTVSFEVRVEARGC
VRGHRTFTVKPVGFEGALRVHVRGAGELCACACTHHAEPRSAACSGNGSLECGVCSCSPG
RLGPRCECSDADEEEDDATDPEGRGDTFVSPPEQPESAGRAGRAAGCRREPGATPCSGRG
DCVCGQCVCRPSELGRVHGSWCECDDFSCIRHKGLLCSGHGPCVCGECACDADWAGESCN
CSLVTDACVSAEGLECSGRGRCECGRCVCTEPGASGSVCQRCPTCADACARKKECVECYL
ASAGVSGWEGNCSRRCPDEMVTVQALDPAERALLCSFKLENECTVRFSHSEDLASGRAVL
RVLARPECAEGPAVLSVVLAVAGGVLLLGVVALLSWKLLVTLHDRHEFARFQAERARAKW
GAGHNPLFKRAVTTFPNVSYRGSQ
NT seq 2595 nt   +upstreamnt  +downstreamnt
atgcacaccagcggatttcatcgttccatctccgcggttaatcgtcgtctctgcaagctc
cacacgagaacacgaagcgaacttctctcgtgcccgagcatcggtggcgctgggccgagt
cgcagatggcttcgcactcggctcccatcgtcttccctctgcgaaccaactggcgaggga
gcaggcgcgggggggctctgtgcggggggcggagctctgcgctgctccgaatgcctcctc
ctccacccatcctgcgcctggtgctcccagaaggattttccgggcggccgctcccgctgc
gatctccaggagcgccttctccactcgggctgcccagccgatttggtggaggccccgagg
agccaggtgcagctgatccaggctctgccgctcagcgagaagcccagaacggtggagacg
gggaaaacgcgggagacgagagagtcgccctccggagtggtgcagatttacccgcaggag
gtgtcactctccctccggccaggggacccggcgaccgtgcacgtgcaggttcgccaggtg
gaggactaccctctcgacctctactacctgatggatctgtcgctgtccatgaaggacgac
ctggacaacattcgcgtgctcggcacacagctcgaggccgccatggcccgtctcacgagc
aagctccgcctgggcttcggctcgttcgtggacaaacccgtgtcgcccttcacgaacacg
gcaccggcttacctgcgcaacccgtgtctcaggttcaagcgcttccccgtgtgcgggact
cccttcggcttccgccacgtgctggctctcaccgagcgcgccgccagcttcatcgccgag
gtgcagaggcagaacgtgtcgcgcaacaacgacgcccccgagggcggcttcgacgccatc
ctgcaggcgtccgtgtgcggggagcagatcggttggagaggcggcgccacgcacctcgtg
gtgttcgccacggacgcgggctcgcacctggcgctggacgggcgcctcgcaggacttgcc
gctcctcatgacggccgatgccacctggaccccaacaacagctacgcgcgcagcagcgcc
atggactacccgtccctcgccctgcttggggagaaactgtctgagaacaatgtgaacctc
atctttgcggtcaccagacagcactacgccttgtacaggagctacgcgcacctgctgccc
ggcaccacggctgggattctggccaacgactcgagtaacatcatccagctcatcgtgtct
gcctataacagcatccgctcggtggtggagctggaggtttgggatcagcccgaggacgtc
agcgtctccttcacggccacgtgccagaatgggaccgtgcttccagggcagaggcgctgc
gcggacctccgcgtgggggacacggtgagcttcgaggtgcgcgtagaggcgcgcggctgc
gtgcgcgggcatcgaaccttcaccgtgaagcccgtgggcttcgagggcgcgctgcgcgtg
cacgtgcgcggcgccggggagctgtgcgcgtgcgcgtgcacgcaccacgcagagccgcgc
agcgccgcgtgctcgggcaacgggagcctcgagtgcggagtgtgcagctgctcgccgggc
aggctcgggccacgctgcgagtgcagcgacgcggacgaggaggaggacgacgctacggac
cccgagggacgaggagacaccttcgtgtccccgccggagcagcccgagtccgcgggccgt
gccggcagggcggccgggtgccgcagggagcccggcgcgacgccgtgcagcgggcgcggt
gactgcgtgtgcgggcagtgcgtgtgccggccgagcgagctgggcagggtgcacgggagt
tggtgcgagtgcgacgacttctcctgcatccggcacaaggggctgctgtgctcgggccac
gggccgtgcgtgtgcggcgagtgcgcgtgcgacgcggactgggccggcgaaagctgcaac
tgctccctggtgacggacgcgtgcgtctcggccgaggggctcgagtgcagcggccggggg
cgctgcgagtgcggccgctgcgtgtgcacggagcccggcgcgtcgggctccgtgtgccaa
cgctgccccacctgtgccgacgcctgcgcccgcaagaaggagtgtgtggagtgctacctg
gcctcggctggagtgtcgggctgggagggaaactgcagccggaggtgtccggacgagatg
gtgacggtgcaagctctggacccggcggagagggccctgctgtgcagcttcaagctggag
aacgagtgcacggtgcgcttcagtcacagcgaggacctcgccagcggccgcgccgtgctc
agggtgctcgcccggccagagtgcgcagagggtccggcggtgttgtccgtggtgctggcg
gtggcaggcggggtgctgctgctgggggtggtcgcgctgctcagctggaagctgctcgtc
actctgcacgaccgccacgagttcgctcgcttccaggcggagcgggcgcgtgccaagtgg
ggggcgggacacaatccactgttcaagcgggcggtgacgaccttccccaacgtgtcgtac
cgtgggagccagtga

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