Petromyzon marinus (sea lamprey): 116941081
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Entry
116941081 CDS
T09614
Name
(RefSeq) integrin beta-3-like isoform X1
KO
K06588
integrin beta 5
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04145
Phagosome
pmrn04148
Efferocytosis
pmrn04510
Focal adhesion
pmrn04512
ECM-receptor interaction
pmrn04810
Regulation of actin cytoskeleton
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116941081
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116941081
04148 Efferocytosis
116941081
09144 Cellular community - eukaryotes
04510 Focal adhesion
116941081
09142 Cell motility
04820 Cytoskeleton in muscle cells
116941081
04810 Regulation of actin cytoskeleton
116941081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116941081
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmrn04515
]
116941081
Membrane trafficking [BR:
pmrn04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
116941081
Cell adhesion molecules [BR:
pmrn04515
]
Integrins
Integrin beta subunits
116941081
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
I-EGF_1
Integrin_B_tail
PSI_integrin
EGF_integrin
EGF_2
EGF_TEN
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
116941081
NCBI-ProteinID:
XP_032807588
UniProt:
A0AAJ7SZT0
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Position
10:complement(14117943..14149714)
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AA seq
864 aa
AA seq
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MHTSGFHRSISAVNRRLCKLHTRTRSELLSCPSIGGAGPSRRWLRTRLPSSSLCEPTGEG
AGAGGLCAGGGALRCSECLLLHPSCAWCSQKDFPGGRSRCDLQERLLHSGCPADLVEAPR
SQVQLIQALPLSEKPRTVETGKTRETRESPSGVVQIYPQEVSLSLRPGDPATVHVQVRQV
EDYPLDLYYLMDLSLSMKDDLDNIRVLGTQLEAAMARLTSKLRLGFGSFVDKPVSPFTNT
APAYLRNPCLRFKRFPVCGTPFGFRHVLALTERAASFIAEVQRQNVSRNNDAPEGGFDAI
LQASVCGEQIGWRGGATHLVVFATDAGSHLALDGRLAGLAAPHDGRCHLDPNNSYARSSA
MDYPSLALLGEKLSENNVNLIFAVTRQHYALYRSYAHLLPGTTAGILANDSSNIIQLIVS
AYNSIRSVVELEVWDQPEDVSVSFTATCQNGTVLPGQRRCADLRVGDTVSFEVRVEARGC
VRGHRTFTVKPVGFEGALRVHVRGAGELCACACTHHAEPRSAACSGNGSLECGVCSCSPG
RLGPRCECSDADEEEDDATDPEGRGDTFVSPPEQPESAGRAGRAAGCRREPGATPCSGRG
DCVCGQCVCRPSELGRVHGSWCECDDFSCIRHKGLLCSGHGPCVCGECACDADWAGESCN
CSLVTDACVSAEGLECSGRGRCECGRCVCTEPGASGSVCQRCPTCADACARKKECVECYL
ASAGVSGWEGNCSRRCPDEMVTVQALDPAERALLCSFKLENECTVRFSHSEDLASGRAVL
RVLARPECAEGPAVLSVVLAVAGGVLLLGVVALLSWKLLVTLHDRHEFARFQAERARAKW
GAGHNPLFKRAVTTFPNVSYRGSQ
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccagcggatttcatcgttccatctccgcggttaatcgtcgtctctgcaagctc
cacacgagaacacgaagcgaacttctctcgtgcccgagcatcggtggcgctgggccgagt
cgcagatggcttcgcactcggctcccatcgtcttccctctgcgaaccaactggcgaggga
gcaggcgcgggggggctctgtgcggggggcggagctctgcgctgctccgaatgcctcctc
ctccacccatcctgcgcctggtgctcccagaaggattttccgggcggccgctcccgctgc
gatctccaggagcgccttctccactcgggctgcccagccgatttggtggaggccccgagg
agccaggtgcagctgatccaggctctgccgctcagcgagaagcccagaacggtggagacg
gggaaaacgcgggagacgagagagtcgccctccggagtggtgcagatttacccgcaggag
gtgtcactctccctccggccaggggacccggcgaccgtgcacgtgcaggttcgccaggtg
gaggactaccctctcgacctctactacctgatggatctgtcgctgtccatgaaggacgac
ctggacaacattcgcgtgctcggcacacagctcgaggccgccatggcccgtctcacgagc
aagctccgcctgggcttcggctcgttcgtggacaaacccgtgtcgcccttcacgaacacg
gcaccggcttacctgcgcaacccgtgtctcaggttcaagcgcttccccgtgtgcgggact
cccttcggcttccgccacgtgctggctctcaccgagcgcgccgccagcttcatcgccgag
gtgcagaggcagaacgtgtcgcgcaacaacgacgcccccgagggcggcttcgacgccatc
ctgcaggcgtccgtgtgcggggagcagatcggttggagaggcggcgccacgcacctcgtg
gtgttcgccacggacgcgggctcgcacctggcgctggacgggcgcctcgcaggacttgcc
gctcctcatgacggccgatgccacctggaccccaacaacagctacgcgcgcagcagcgcc
atggactacccgtccctcgccctgcttggggagaaactgtctgagaacaatgtgaacctc
atctttgcggtcaccagacagcactacgccttgtacaggagctacgcgcacctgctgccc
ggcaccacggctgggattctggccaacgactcgagtaacatcatccagctcatcgtgtct
gcctataacagcatccgctcggtggtggagctggaggtttgggatcagcccgaggacgtc
agcgtctccttcacggccacgtgccagaatgggaccgtgcttccagggcagaggcgctgc
gcggacctccgcgtgggggacacggtgagcttcgaggtgcgcgtagaggcgcgcggctgc
gtgcgcgggcatcgaaccttcaccgtgaagcccgtgggcttcgagggcgcgctgcgcgtg
cacgtgcgcggcgccggggagctgtgcgcgtgcgcgtgcacgcaccacgcagagccgcgc
agcgccgcgtgctcgggcaacgggagcctcgagtgcggagtgtgcagctgctcgccgggc
aggctcgggccacgctgcgagtgcagcgacgcggacgaggaggaggacgacgctacggac
cccgagggacgaggagacaccttcgtgtccccgccggagcagcccgagtccgcgggccgt
gccggcagggcggccgggtgccgcagggagcccggcgcgacgccgtgcagcgggcgcggt
gactgcgtgtgcgggcagtgcgtgtgccggccgagcgagctgggcagggtgcacgggagt
tggtgcgagtgcgacgacttctcctgcatccggcacaaggggctgctgtgctcgggccac
gggccgtgcgtgtgcggcgagtgcgcgtgcgacgcggactgggccggcgaaagctgcaac
tgctccctggtgacggacgcgtgcgtctcggccgaggggctcgagtgcagcggccggggg
cgctgcgagtgcggccgctgcgtgtgcacggagcccggcgcgtcgggctccgtgtgccaa
cgctgccccacctgtgccgacgcctgcgcccgcaagaaggagtgtgtggagtgctacctg
gcctcggctggagtgtcgggctgggagggaaactgcagccggaggtgtccggacgagatg
gtgacggtgcaagctctggacccggcggagagggccctgctgtgcagcttcaagctggag
aacgagtgcacggtgcgcttcagtcacagcgaggacctcgccagcggccgcgccgtgctc
agggtgctcgcccggccagagtgcgcagagggtccggcggtgttgtccgtggtgctggcg
gtggcaggcggggtgctgctgctgggggtggtcgcgctgctcagctggaagctgctcgtc
actctgcacgaccgccacgagttcgctcgcttccaggcggagcgggcgcgtgccaagtgg
ggggcgggacacaatccactgttcaagcgggcggtgacgaccttccccaacgtgtcgtac
cgtgggagccagtga
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