Petromyzon marinus (sea lamprey): 116941084
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Entry
116941084 CDS
T09614
Name
(RefSeq) probable nuclear hormone receptor HR38
KO
K04465
nuclear receptor subfamily 4 group A member 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116941084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116941084
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pmrn03310
]
116941084
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
116941084
Nuclear receptors [BR:
pmrn03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
116941084
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
TFIIA
Motif
Other DBs
NCBI-GeneID:
116941084
NCBI-ProteinID:
XP_032807593
UniProt:
A0AAJ7WT06
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Position
10:14254660..14276474
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AA seq
849 aa
AA seq
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MSAACPELHLMQSALSSSRLMQVPERRAASSSSSSSSSSSSSSSSLSYQACVHAQGQALE
LQPLDLSPRLGTPEFVRFNMELANADPGYGGKPSDSCAFHHHHQHQNHHHQHHQQQQHEY
QNAQQDEENTDQRQPAPVKAEVQPMMSCLLHGAAYPHPSHEHHQQQQQQQHQEHQQQQLN
GAAGAREYFKASPPHTPPAAYTDMQQEQQQHPQLLQRTWDVGAALGALPFPRDYTITSLT
ELGVKALPASKYKSLQPPSSSSPVPYKFYLPGRDAPPSADGGPRFSSYVGCFHRAPAGEP
RAGFPSAEPLQPGFAVPGDPDAHRGLQVASSSSPGPGYSTFSDSLNSQQQQQQRLSRGSP
GGDASRAGARAAHAGYAEGTSDVGVGREMAMSFAGGPLPAVMSGGDNFDLAMTSRAQRSD
SGMGRGGVHGVGGMPLAPSPTDYPRGLGPQSQASQQQQQHQHQQQQQQLMSQRYEDVDSP
GRFAARRFPTPTSPPPSEGMCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLAS
RSCPVDKRRRNRCQFCRFQKCLSVGMIREVVRTDSLKGRRGRLPSKPKGAGAGRALGRVG
SPGEGQQHGQQHGSGGNALLCGVARAHHDSWPAAAHLDYSMYSPAGEHDPGGPAAEADHV
RVFYELLATSAEASRAWASRLPGIPSLARPDQDILLDAAILELFVLRLAYRSRPREGRMV
FCAGQVLHPSQCLRAFGEWMEPILEFSSSLQSLQIDATAFACLEMTVLLTDRRELREPKR
VAELRRRVQQSAREHVGAGSPVHARLAGAPAELRALCTQGLQRLFYLKLEELVPAPPVVE
RLFRDTLPF
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgcatgccctgagctgcacctgatgcaaagtgcgctctcctcctcgcgtctc
atgcaggttccagagcgccgcgcggcctcatcctcttcatcatcatcatcctcctcatca
tcatcgtcatcgtccttgtcctatcaagcctgcgtgcacgcacaaggccaggctctcgag
ttgcagccgttggacctgagcccccgtctcggcaccccagagtttgtgcgctttaacatg
gaactcgcgaacgccgacccgggctacgggggaaagccctccgactcatgcgcgttccac
caccatcaccagcaccagaatcatcatcaccagcaccaccagcagcagcagcatgagtac
cagaacgcgcaacaggacgaagagaatacagaccagcggcagcccgcacccgtgaaggca
gaggtgcagcccatgatgtcctgcctgctgcacggcgcagcgtacccacacccgagtcac
gagcaccaccagcagcaacagcagcagcagcaccaggagcatcagcagcagcagctcaac
ggagccgctggggcgcgggaatacttcaaagcgtctccgccgcacaccccgccggccgct
tacaccgacatgcaacaggagcagcagcagcatccgcagctgctgcagagaacatgggat
gtgggggcagccctgggcgcgctgcccttcccgagagactacaccatcaccagcctcacg
gagctcggcgtgaaggcgctgcccgcttccaagtacaaatccttgcagcctccatcctcc
tcgtcccctgtgccctacaagttctacctgcccgggcgggacgcgccgccgagcgcggat
ggaggtccccgcttctccagctacgtcggctgcttccaccgagctccggcgggcgagccc
cgtgccgggttcccctcggcagaacccctacagccagggttcgcggtcccgggtgacccg
gacgcgcaccgcggtcttcaggtcgcctcgtcctcctcgcccggtcccggttactcgacc
ttctccgactccctcaactcccagcagcagcagcagcagcggctcagccgggggtccccg
ggcggggatgcgtcgcgggccggggcgagagcggctcacgcagggtacgcggagggcacg
agcgacgtgggcgtcggcagggagatggcgatgtcgttcgcgggtggtcccctgcccgcc
gtcatgtccggcggcgacaacttcgacctcgccatgacgagcagagcgcagcgttcggac
tcgggcatgggcagaggtggggtccacggggtgggtgggatgccgctcgctccgtctccc
accgactacccgcggggtctggggccacaatcacaagcttcgcagcagcagcagcagcac
caacatcagcagcagcagcagcagctgatgtctcagcgctacgaagacgtcgactcgccg
ggccgcttcgccgcgcggcgcttcccgacgcccacgtctccgccgcccagcgagggaatg
tgcgccgtgtgcggggataacgcggcgtgccagcactacggggtgcgcacgtgtgagggg
tgcaagggcttcttcaagcgcacggtgcagaagaacgccaagtacgtgtgcctcgccagc
cggagctgccccgtcgacaaacggaggcgcaaccgctgccagttctgccgcttccagaag
tgcctcagcgtgggcatgatccgagaagtggttcgcaccgacagccttaagggcaggcga
ggccgcctcccctccaagcccaagggcgcgggggcagggcgggcactcggcagagtgggc
agccccggggaagggcagcagcacggacagcagcacggctcgggagggaacgctctgctg
tgcggcgtggcgagggctcaccacgactcgtggccggcagccgcgcacctcgactactcc
atgtacagccccgcgggcgagcacgaccccgggggcccggccgccgaggctgaccacgtg
cgcgtcttctacgagctgctcgccacctcggcggaggcgagccgcgcgtgggcctcgcgt
ctcccgggcatcccgagtctcgccagacccgaccaggacatcctcctcgacgccgctatc
ctcgagctcttcgtcctccgcctcgcctacaggtcgcgaccccgagagggccgcatggtg
ttctgcgcggggcaggtgctgcacccttcccagtgcctgcgcgccttcggggagtggatg
gagcccatcctggagttctcctcgtccctgcagtccctgcagatcgacgccacggccttc
gcctgcctcgagatgacggtgctgctcacggaccggcgcgagctgcgggagccgaagcgc
gtggcggagctgcggcggcgcgtgcagcagagcgcgcgcgagcacgtgggcgcggggagc
cccgtgcacgcgcgcctcgcgggggctcccgcggagctgcgcgcgctctgcacgcagggc
ctgcagaggctcttctacctcaagctcgaggagctcgtgcccgcgccgcccgtcgtcgag
agactcttccgcgacacgctgcccttttag
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