Petromyzon marinus (sea lamprey): 116941105
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Entry
116941105 CDS
T09614
Name
(RefSeq) polycystic kidney disease 1 like 1-like
KO
K04987
polycystin 1L1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmrn03037
]
116941105
04040 Ion channels [BR:
pmrn04040
]
116941105
Cilium and associated proteins [BR:
pmrn03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116941105
Ion channels [BR:
pmrn04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116941105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLAT
REJ
PKD_channel
GPS
Polycystin_dom
Ion_trans
Motif
Other DBs
NCBI-GeneID:
116941105
NCBI-ProteinID:
XP_032807636
UniProt:
A0AAJ7WRN7
LinkDB
All DBs
Position
10:15266729..15302974
Genome browser
AA seq
2451 aa
AA seq
DB search
MSPIPTSSSVANDTYTASSITVLSSRATPSSTASSTASSTASSIRSTSTTSSTSSISSQA
TAPGATQANRTAPAVAIPTSSRASTQAANPPACEASVSSTAAPTETSSQDTFPPLDPGNV
EEGEASEGRPSLNRKRRAATSGDSAGRPANCSNSTATNATAAPPTMTPPVTSVWLPMLPP
GLEEGANVVQRPQRMVTSNVSSEAPSNVSSEAPSNVSSEAPSNVSSEAPGPSTTRSAPST
ASASTPQAGSSGSIVDSGGISRNISEGTVNSGRGSGSGSVTAPPNIATNTTKPGDDVIPD
QPKVEVVKESIDYVLEINLLREDMTSSGLSGDTLTLRPNMLTDNQTYAIVLTVTSTLGTA
VEKGYVHLLFTAALSPNPEVYCTISPNDGVELLTVFSIFCSSSNAKHQPLEYEYSYSASG
SSVQPTLLYQGLDNERIFVLPAGRVQDANMVNVSILARNSLGVPTELCSQRVKVDNLSAP
NGTTLDKYIHAALVTPGAKLTEVLGLGDARLTRTFLGIVTSVLNRLVSTDNASMTRQLEI
RERLIQTLCNLRISTQEELRDTATRLAELTSTLPQLGNNTLWMLSELAWLVAADDDAAPT
PDWASVTQLLSAVSRSLRVVSAREDPSTPRLLPRAVASITRLLQRYVALASEAEASVELE
GLAVRVERLGSVGGVVARVPVSGGAVFYLPRDLDGQITRQPNGSVYTRIVHFNANPYFWG
SRYHEVLGTVADLTLYTHKGLSIKVSKLSTPITIELPLPSLQSEAAWFSLARPTMNVHAF
NVSAGEERGTLQITFAFQRPSQRPFPITVLMRPRAEPSPDNFTYRQIYEWQSDSVRLLLS
PAKLSYKGVYYLALLDSTFDRVPPRRHLAPSVNYSLSVDWLECLYWDGEGSWRPDGCETA
TALQSNRVNCSCDHLTTFTAVASRVASSPSQTPVLSFIRPLENLFPCAVVLLALALAVPG
FALCRRWDRHDEHKAGAIPLQDNLPSDRQLYEVTLETGFRAGAGTTAKANVILHGEHGTS
ETRELHCEDKPLFERNSTHTFIMSVPDSLGPIWKLHLWHNNRGTSPSWFVSRVTVRDLWS
GSAWLFPAECWLAAERGDGRVERELLALSGALRFTALLYSKVTAYLEDFHLWASVYSRPS
CSRFTHTQRLSVCLCLLLAYAGANALVVTLREDKHAVELGRVEVSLESLVVGLLCSAVVL
PLAGIVSLLFRWSEVDRGCAHSILEQYKLKQLQETHAAGGSPGLTAGDSGADSYLSWQSL
QQWAQEAWRKKHESSVEDGLSEFGDSDLASVTGAKRPSPVPAATDLAAGRLQETVGAPEQ
RPAGVRQSRGLPGNGSQGQGAEPVLGSVAPRCPSEGDSSGFEDGSSQEQGKPSGGRRPCP
GESSSDLHSDFSDGSSLYGRGRGVGARVRLPSRCCYLAWMLCILLGLASAAATAVLGFRF
SRSKCMAWMHSFFFSLIVCFFIIQPAVLVLAALSVTVWWRRDAQCLQAQCLDAACPVDTW
RTKLMGRAASHSQGNPQDFTDISKSLAARRRARHLRLARPPSREQLKRCRERLRLRRLVV
RSLRSCCLYVLMLSLLAFATFAEFSTDEFYLQRAIRGHFNRSAETSFLGVRTADEWWRWS
EAAMVDSLYAAGGTNGGEAPPPAGSREVGPLQGNYHLVGQPSVRRLDIDGSNCTGCAELS
PSAAISLGSTRAEALGVLSGLRAAGWLDQASRASVLVELALYSPPSQLFVSVALLARVPS
LPGERPSIGVRSARLYKLGTPLNYATMTCELLFLVLILFQLYLQLCRLSDRGLVAHCCEP
WNWLEAGMVVVALAHFAVYVNRFVVAMTLIEYLEVTFLEATLDVGPLATWDQTSRWLSAV
VLFLLLVRTLHALRCLGPMAVCLSPLNFGRTHLPPLVLCLALLLLAFSSLGYVCFGRLTH
AYVDLLSAWETLLLTPLGASGTRHVSALSRSEGAAAFYVTFLLAGGLLWIAVLYSVLRAV
MRRARRAALRRRHVVWPRDVAGFLLRELAVLLGRRAPLQDHEPPVPPGLMLEEFEGQVDE
LLFRMNALTNSLHHSLQPKPSNYLDEDNAYNSASEGSCAHGSQLAALDLERELEQGLERD
CPQLGDLLQQWRHGERDADFLHKEHVLRAQLELEIIERLQLCEESALGEEPMGHADSPCS
NDQLELTQSISRGLHSGSTSSLAHSDTSQARHPLHSPEVSPAVSNLSAEDSQWSRLEGQS
HAEPAAAGSKQKHGVSAQNGAVATTSANVAASPLLPGGRLGEKTASSRSPEAPAKERQRR
PVVAHQNKPRKLKRSHATLIPTFDDPSFLEDCVDFLSDPAEEQAPGGGLLLVAPQNVSSV
DVMVHSHASQAESFSDCFSGEEPRNLARDQEHQSPPPAAYVGKAPHQPGGDLPAASSPAQ
KLSKVKKKKKKARKELEAMIRDLACEPPATVRESDVTPAESEAPGMLKRCW
NT seq
7356 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccaattcccacatcctcatccgtggccaatgacacctacactgcatcctccatc
accgtgctatcctccagagccacaccctcctccacggcatcctccaccgcctcctccaca
gcctcctccattcgttcaacgtccaccacttcctccacctcctcgatctcctcacaggcc
acagctcccggcgcgacgcaagcaaacaggacggcgcccgccgtggccatccccacgagc
tctcgtgcctccacgcaggccgccaacccgcccgcatgtgaagcctccgtctccagcacg
gccgcgcccactgagacgtcgtcacaggacacgtttcccccactagatccggggaacgtg
gaggagggcgaggcgtcagagggcaggccgtccttgaatcgcaagaggagagctgccacc
tctggggattccgcaggtcgccctgccaactgctcgaactcgacggcgacaaacgcgacg
gccgcacctcccacgatgactcctcctgtgaccagcgtgtggctcccaatgttgcctcca
ggtctcgaagagggggccaacgttgtccaaagaccccagcgtatggtgacgagcaacgtg
agcagcgaggctccgagcaacgtgagcagcgaggctccgagcaacgtgagcagcgaggct
ccgagcaacgtgagcagcgaggctccgggcccgtccaccacccggagcgcgccgtccacg
gcgagcgcctccactccacaggccggctcgtcgggtagcattgtcgattcgggcgggatc
tccaggaacatctccgagggcaccgtgaactccggaagaggctccggttctggctccgtg
acggcgccgcccaacattgccacaaataccacaaaaccaggagacgacgtgatcccggac
cagccaaaggtcgaagttgtcaaagagtcgatagactacgttctggagataaaccttctg
agagaagacatgacgtctagcggcttgagtggcgacaccctgaccctgcggcccaacatg
ctgacggacaaccagacctacgccatcgtgctgaccgtcaccagcacgttgggcacggcg
gtagagaaagggtacgtacatcttctgttcacggctgccctctctccgaacccggaggtc
tactgtaccatcagccccaacgatggtgtggaattgctcaccgtattcagcatcttctgc
agcagctccaacgccaagcaccagcccctggagtacgagtacagctacagtgccagcgga
agctctgtgcagcccaccctgctctaccaggggctcgacaacgagcgcatcttcgtcctc
ccggcgggccgcgtgcaagatgccaacatggtgaacgtctccatcttggcgaggaacagc
ctgggcgtcccgacggagctctgctcacaacgcgtcaaagtcgataacctgtcggcaccc
aacggcacgacccttgacaagtacatccacgcggcgctggtgacgcccggcgcgaagcta
acggaggtgctcgggctgggagatgcccgcctgacgcgcaccttcctgggcatcgtgacc
tccgtcctcaacagactcgtcagcaccgacaatgccagcatgacgcggcagttggaaatt
cgggagaggctcatccagaccttgtgcaacctgcgtataagcacacaggaagagttgcga
gacacagcaacgaggctagcggagctcacgagcacgctcccacagctgggcaacaacacc
ttgtggatgctgagcgagctggcgtggctggtcgccgcggatgacgacgccgccccgacc
cccgactgggcctcggtgacgcagctgctgagcgccgtgagccgcagcctgcgggttgtg
tcggcgcgagaggatccctccaccccgcggctgctcccgcgcgccgtcgcctccatcacc
cgcctcctgcagaggtacgtggcgctcgcgagcgaggcggaggcgagcgtggagctggag
ggtctggccgtgcgcgtggagcgcctcggctccgtggggggagtggttgcccgggtcccc
gtgagcgggggagccgtcttctaccttccgcgggatctcgacgggcagatcacgcgccag
cccaatggcagcgtctacacccgcatcgtgcacttcaacgcaaacccttacttctggggc
agccgctatcacgaggtccttgggacagtggccgacctgacgctgtacacccacaaggga
ctaagcatcaaggtgtcgaaactctccactcccatcaccatcgagctgcccctgccgtcc
ctgcagagcgaggcggcttggttctcgctggcgcgccccacgatgaacgtgcacgcgttc
aacgtgagcgccggggaggagcgcgggacgctgcagatcaccttcgccttccagcggccg
agccagcggcccttccccatcacagtgctcatgaggccccgggccgaaccgtcgccggac
aacttcacgtacagacagatctacgagtggcagagcgacagcgtgcgcctcctcctgtct
cccgccaaactcagctacaaaggcgtctactacctcgctctgctggactccacgttcgac
cgcgtgccaccacgccggcacctggcaccgtctgtcaactactcactgagcgtggattgg
ctcgagtgtctctactgggatggagaaggaagctggaggcccgatggatgtgagactgct
accgccttgcagtccaacagggtcaactgcagctgcgatcacctgaccactttcaccgcc
gtcgcgtcccgggtcgccagctccccgtcacaaacgccagtgcttagcttcatcaggccc
ctggagaacttgttcccgtgcgccgtggtgctgctggcgctcgccctggcggtgccgggg
ttcgcgctgtgccgccgctgggaccggcacgacgagcacaaggccggggccatcccgctg
caggacaacctcccaagcgaccggcagctctacgaggtcacgctggagaccgggttccgt
gccggggccggcaccaccgccaaggcgaacgtgatccttcacggagagcacgggacgtca
gagactcgcgagctccactgtgaagacaagccgctcttcgagaggaactccactcacacc
ttcatcatgagtgtccccgacagtctgggccccatctggaagctgcacctgtggcacaac
aaccgtggcacgtcccccagctggttcgtgagccgcgtgacggtgcgcgacctgtggagc
ggctcggcctggctcttcccggctgagtgctggctggcggcggagcgcggcgacggcagg
gtcgagcgggagctgctggcgctcagtggcgctctgcgcttcaccgcgctgctgtacagc
aaggtcacagcctacctcgaggacttccacttgtgggcgtcggtgtacagccgcccctcc
tgcagccgcttcacgcacacgcagcgcctctccgtgtgcctctgcctgctgctcgcgtac
gccggggccaacgcgctggtggtcaccctcagggaggacaaacacgcggtggagctgggt
cgcgtggaggtgtcgctcgagtcgctcgtggtcggcctgctctgctccgccgtggtgctc
ccgctcgccgggatcgtttcccttctcttccgctggagcgaggttgacaggggctgcgct
cactccatcctggagcagtacaagctcaaacagctgcaggagacgcacgccgccgggggc
agtccgggcctcacggctggagacagcggcgccgattcctacttgtcgtggcagagcctg
cagcagtgggcccaggaggcgtggaggaagaagcacgagtcttccgtggaggacgggctc
agcgagttcggggactcggacctcgcgagcgtgaccggtgccaagaggccgagccccgtg
cccgccgccacggatctggcggccgggcgcctccaagaaacagtcggggctcccgagcag
aggcccgccggggtgcggcagagccggggtctccccggcaacgggagccaagggcagggc
gcggagccggtgctggggagcgtcgccccgcgctgcccctcggagggagactcgagcggc
tttgaggacggcagctcccaggagcaggggaagccctcgggggggaggcggccgtgcccc
ggggagagctcctcggacttgcactctgatttctccgatggcagcagcctgtacgggcga
ggtcgcggcgtcggggcccgggtgcggctgccgtcgcgctgctgttacctcgcctggatg
ctctgcatcctgctcggcctggcctcggccgctgccaccgccgtcctggggttcaggttc
agccgctccaagtgcatggcatggatgcactcgttcttcttttccctcatcgtctgcttc
ttcatcattcagccggcggttttggtgttggcggcgctttccgtgacggtttggtggcgg
agagacgcccagtgcctgcaggctcagtgcctggacgccgcctgtcccgtcgacacctgg
aggaccaagctcatgggccgcgctgcttctcactcacagggcaacccgcaggacttcacg
gacatctccaagagcctggcggcccgacggcgcgcgcgccacctccgcctggcgcgaccc
ccaagccgcgagcagctcaagcggtgccgcgagcgcctgcgcctgcgccgcctcgtggtg
cgctcgctccggagctgctgcctctacgtcctcatgctctcgctcctggcattcgcgacg
tttgccgagttctccaccgacgagttctacctgcagcgagccatccgcggccacttcaac
aggagtgctgagacctcgttcctgggcgtgcgcacggctgatgagtggtggcgctggagt
gaggcggccatggtggactcgctgtatgcggcgggcggcaccaacggcggcgaagcgcca
ccgcccgcggggagccgggaggtggggccgctgcaggggaactatcacctcgtaggccag
ccctcggtgaggcgcctggacatcgacggctcgaactgcacgggctgtgcggagctgtcc
ccatccgcagccatcagcctcggcagcactcgtgctgaggcgttgggggtgctgagcggg
ctgcgggcggccggctggctggaccaggcctctcgggcctctgtcctggtggagttggca
ctctacagcccgccgtcccagctgttcgtcagcgtagcgctgctggcgcgcgtgccctcg
ttgccaggggagcggcctagcatcggcgtacggtctgctcgcctctacaagctcggcaca
ccgctcaactacgccaccatgacctgcgagttgctgttcctggtactcatcctgttccag
ctgtacctgcagctgtgccgcctgagcgaccgtgggctcgtggctcactgctgcgagccc
tggaactggctggaggccggcatggtggtggtggcgctcgcccactttgcggtttacgtg
aaccgcttcgtggtggcaatgacgctgatcgagtacctggaggtgaccttcctggaggca
acgctggacgtgggccctctggccacgtgggatcagacgtctcgctggctctcggcggtg
gtgctcttcctgctgctggtgcggacgctgcacgcgctgcgctgcttgggccccatggcc
gtgtgtctgtcacccctgaacttcgggcgcacacacctccccccgctcgtgctgtgcctg
gcactgcttctactggccttctccagcctgggctacgtgtgcttcgggaggttgacgcac
gcctacgtggatctgctgtcggcctgggaaacacttctgctgaccccgctgggcgccagc
ggcacgcgccacgtctcggccctctcccgctccgagggagccgccgcgttctacgtcacg
ttcctcctcgccgggggtctcctctggatcgccgttctctacagcgtcctgcgagccgtc
atgcgacgagctcgccgcgcagccctgcggaggaggcacgtggtgtggccacgcgacgtg
gccgggttcttgctgcgtgagctcgccgtgctgctgggtcgaagggctccattgcaggat
cacgagccgcccgttccgccgggcctcatgctggaggagtttgagggccaggtggacgag
ctgctgttccgcatgaacgcgctcacaaacagcctccaccactcgctgcagccgaagcct
tccaactacctggacgaggacaacgcctacaactcggcctccgagggctcctgcgctcac
ggctctcagctggcggcgctggatctggagcgggagctggagcagggcctggagcgcgac
tgtccgcagcttggggatctgctgcagcagtggcgtcacggcgagagggacgccgacttc
ctgcacaaggagcacgttctcagggctcagctcgagctggagatcatcgagaggctgcag
ctgtgtgaggagagcgcgctaggtgaggagcctatgggccatgcggacagcccctgctcc
aacgatcaactcgagctcacgcaaagtatttcccgaggccttcacagtggcagcacctcc
agtctcgcacactctgacaccagccaggcgcggcaccctctccattctccggaggtcagc
ccggctgtgtcaaatctctctgcggaggactcacagtggagtcgacttgaaggacaaagt
catgcagagccggcagcggcaggctcaaaacaaaaacacggcgtctctgcccaaaatggt
gccgttgcaacgacgagtgctaatgtggctgcttcgcctctgctccctggtgggagactt
ggtgagaagaccgcatcgtcaagatctccagaagccccggcaaaggagcgtcagcggagg
cccgtcgtggcgcaccagaacaagccgcgcaagttgaagaggtctcacgccacactcatt
cctaccttcgacgatccctcgttcctggaggattgcgtggacttccttagcgatcccgca
gaggagcaggctcccggcggtgggttgctgttggtcgccccgcaaaacgtcagctccgtg
gatgtgatggttcactcgcacgcgtcccaagcggagtccttcagcgactgtttctccggg
gaagagcccagaaacttggcgcgcgaccaggagcaccagtctcccccgccggcggcgtat
gttggcaaagctcctcatcaacccggtggcgacctccctgcagcgagctctccagcccag
aaactgagcaaagtgaagaagaaaaagaagaaagcgagaaaggaactggaagcgatgatc
agggacttggcgtgcgagccgccggcgaccgtcagggagagcgacgtgacccccgctgag
agcgaggcacccggcatgctcaagcggtgctggtga
DBGET
integrated database retrieval system
