Petromyzon marinus (sea lamprey): 116941202
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Entry
116941202 CDS
T09614
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116941202
03041 Spliceosome [BR:
pmrn03041
]
116941202
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
116941202
Spliceosome [BR:
pmrn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116941202
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
PHM7_cyt
RRM_10
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
116941202
NCBI-ProteinID:
XP_032807868
UniProt:
A0AAJ7SY98
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All DBs
Position
11:2992745..3093551
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AA seq
409 aa
AA seq
DB search
MEDDGQPKTLYVGNLSRQVTEALILQLFGQIGPCKSCKMITEVKSKENKLQASSDPYCFV
EFYEHRHAAAALAAMNGRKILGKEVKVNWATTPSSLKKDTSSPSTNFGTRQLDHYHVFVG
DLSPEISTDDLRAAFAPFGKISDARVVKDLATGKSKGYGFVSFFQKLDAENAIQQMGGQW
LGGRQIRTNWATRKPPAPKGSQDNPKHLSFEEVLNQSSPTNCTVYCGGITQGLTEQLMRQ
TFLLFGQILEIRVFPDKGYSFIRFATHESAAHAIVSVNGSTIEGFSVKCFWGKEASDPVN
QFQQQFSQVGYTQQPWTQWGPWYGGSQQYQQFINNGWQVPQYSMYGQAWNQQGYSLEQTQ
PAAAAAAAAGWMSSAAGNSFAYRTQPSQGQSASLIPSPATFSMAGFQNQ
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgacgggcagcccaagacgctgtacgtggggaatctctcccggcaggtgacg
gaggctctcattttgcagctgtttggtcagatcggcccatgtaaaagctgcaaaatgatc
acagaggtaaaatcaaaggaaaataaattacaggcgagcagtgacccctactgcttcgtg
gagttctacgagcacaggcacgccgcggctgcactcgccgccatgaacggccgtaagatt
ctcggcaaggaagtgaaagtgaattgggccacaacacccagcagcctgaagaaggacaca
agcagcccatctaccaactttggaacacgccagttagatcactatcacgtgtttgtggga
gacctgagcccagagatctccaccgatgatctccgggcggccttcgctcccttcggtaaa
atctccgacgcacgagtagtaaaagacttggccactggcaaatctaaaggatatggtttt
gtctctttcttccagaaactggacgcggagaacgccatacagcagatggggggccagtgg
ctgggaggccggcaaatccggaccaactgggccactcgcaagccccccgctccgaaaggc
tcccaggacaaccccaagcacctgtcattcgaagaggttctcaatcagtcaagccccaca
aactgtaccgtctactgtggaggcatcacccagggactcacagaacaactcatgcgtcag
accttcctgctcttcggtcagatcttggagatccgggtgttcccggacaaaggatactct
tttatacggtttgccacacacgagagtgccgcccacgccatcgtgtcggtcaacggcagc
accatcgagggcttcagtgtcaagtgcttctgggggaaggaggcgtcggaccctgtgaat
cagtttcagcagcagttcagccaggtgggctacacgcagcagccgtggacccagtggggg
ccctggtatggaggaagccagcagtaccagcagttcatcaacaacggctggcaggtccca
cagtacagcatgtacggccaggcctggaaccagcaagggtacagcttagagcagacgcag
ccggcggccgcagccgcggcggccgcaggctggatgagcagcgccgcgggcaactccttc
gcctacaggacccagccttctcagggccagagcgccagcctcatccccagcccagccacc
ttcagcatggcgggcttccagaaccagtaa
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