Petromyzon marinus (sea lamprey): 116941203
Help
Entry
116941203 CDS
T09614
Symbol
SNX27
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116941203 (SNX27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
116941203 (SNX27)
Membrane trafficking [BR:
pmrn04131
]
Protein recycling
Others
Others
116941203 (SNX27)
Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
116941203 (SNX27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
SNX17-31_F2_FERM
SNX17_FERM_C
Sina_TRAF
PDZ_2
USP7_C2
RBD
TetR_C_26
Motif
Other DBs
NCBI-GeneID:
116941203
NCBI-ProteinID:
XP_032807877
UniProt:
A0AAJ7WS74
LinkDB
All DBs
Position
1:complement(33826106..33843409)
Genome browser
AA seq
560 aa
AA seq
DB search
MAEETAGTRVQPLRQQQQQHAPQQQQQSQQPQQLQHGPRDVCIVKSETGYGFNVRGQVSE
GGQLRSINGELYAPLQHVSAVLPGGAAERAGVLKGDRILAVNGVNVEGATHKQVVDLIRA
AERELVLSVLSVPPQEAERLDPSDESSGHSGYDYGEKRAVPISVPSYKHVERHGERFVAF
NIYMAGRQLCSRRFREFVILHQNLKREFSDFGFPKLPGKWPFSLSEQQLDARRRGLEEYL
ERVCAVRVIGESDIMQEFLSESADQGGSGVAEVDLRVELPNKSTATVSVKKNSTTDQVYK
AVVREVGMETQTINFFALFEVMDHSFERKLAPNEFPHHLYVQNYTSAASGTCLAVRKWVF
TPAHEELLQSSPTALDYLYYQAVEDVRKGRVQPGEKSYQLQKLTEQQKKLQYLALVRGCE
GYGEVAFPHCPCDSRRKGHVVAAVGLHHFSLHACTQEGQLENQVISFEWAEMRQWDTDEE
GMAFCFEYVRGEKKPRWVKIFTPYYNYMHECFERIFCELKWKKEVEDEGDDNRNSLRHGT
GQKTIFRPTNNQMTDIPCSS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagacggcgggaacgcgggtccagccgctccgacaacaacaacaacaacac
gcaccacagcagcaacaacaatcgcaacaaccacagcagctgcagcatgggccgcgcgac
gtgtgcatcgtcaagtcggagacgggatacgggtttaacgtgcgcgggcaggtgagcgag
ggcgggcagctgcgcagcatcaacggggagctgtacgcgccgctgcagcacgtgagcgcc
gtgctgccggggggcgcagccgaacgagccggggtgctcaagggggaccgcatcctcgcc
gtgaacggcgtaaacgtagagggcgctacccacaagcaggtggtggacctgatccgcgcc
gccgagcgggagctggtgctttccgtgctgtcggtgccaccgcaggaggccgagaggctc
gacccgagcgacgagtcgtcgggccactcgggctatgactacggcgagaagcgcgccgtg
cccatctcggtgccgagctacaagcacgtggagcggcacggggagcgttttgtggcgttt
aacatctacatggcggggcgccagctctgctcgcgccgcttccgtgagttcgtgatcctg
caccagaacctgaagcgcgaattctctgacttcgggttcccaaagctcccggggaagtgg
ccgttctccctctccgagcagcagctggacgcacggcgccgcggtctcgaggagtacctc
gaacgagtctgtgctgtgcgcgtcattggagagagcgacatcatgcaggagttcctgtcc
gaatcggcagatcagggcggcagtggcgtggcggaggtggacctgcgcgtggagctgccc
aacaagagcacggcgacagtgtcggtgaagaagaacagcaccaccgatcaagtgtacaag
gcggtggtgcgggaggtcggcatggagacacagaccatcaacttcttcgccttgtttgag
gtcatggaccactcgttcgagcgcaagctggcgcccaacgagttcccgcaccacctgtac
gtgcagaactacacgtcggcggcgtctggcacctgcctcgccgtgcgcaagtgggtgttc
actcccgctcacgaggagctgctgcagagcagccccacggctctcgactacctctactac
caggcggtggaggacgtgcggaagggccgtgtgcagcccggggagaaatcctaccagctg
cagaagctcacggagcagcagaagaagctgcagtacctggcgctggtgcggggctgcgag
ggctacggggaggtggcattcccgcactgcccctgcgactcgcgcaggaagggccatgtg
gtggccgccgtgggcctgcaccacttctcgctgcacgcctgcacccaggagggccagctc
gagaaccaggtgatctcgtttgagtgggccgagatgcggcagtgggacacggacgaggag
gggatggcgttctgtttcgagtacgtacgcggcgagaagaagccgcgatgggtgaagatc
ttcactccctactataactacatgcacgagtgctttgagaggatcttctgcgagctgaaa
tggaaaaaagaggtggaggacgagggcgacgacaacaggaacagcctgagacacgggacg
gggcagaagactatcttcaggccgaccaacaaccagatgacagacatcccttgctcctcg
tga
DBGET
integrated database retrieval system
