KEGG   Petromyzon marinus (sea lamprey): 116941238
Entry
116941238         CDS       T09614                                 
Name
(RefSeq) WD repeat-containing protein 1-like
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
pmrn  Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:pmrn04990]
    116941238
Domain-containing proteins not elsewhere classified [BR:pmrn04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   116941238
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_NOL10_N DSE1_N WD40_MABP1-WDR62_1st CFAP251_N Beta-prop_HPS5 Beta-prop_WDR41 ASA1 PROPPIN Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N eIF2A Beta-prop_VPS8 Beta-prop_DCAF12 RMC1_N Tricorn_2nd WDR54 PEP5_VPS11_N Beta-prop_EIPR1 Beta-prop_TEP1_C WDR90_beta-prop_4th PAC11 WD40_RFWD3 NBCH_WD40 Beta-prop_MIP2 DUF5711 CHAP Beta-prop_SCAP
Other DBs
NCBI-GeneID: 116941238
NCBI-ProteinID: XP_032807961
UniProt: A0AAJ7T086
LinkDB
Position
11:6705414..6730943
AA seq 611 aa
MPYQLKSLYASLPQVERGVAKVIGGDPKGNNFLYTNGKSVIIRNIENPAISDVYTEHSHQ
VLVAKYAPSGFYIASGDVSGKLRIWDSTQKEHILKYEYQPFGGKIKDISWSEDSKRIAIV
GEGREKYGAVILWDSGSSVGEIAGHTKTINSVDIRPSRPYRLVTASDDNCGAFYHGPPFK
FQFTLMDHTRFVNCIRFSPDGARFATAGADGQIFVYDGTSGQKICALGGDKAHDGGIYAI
SWSADSSQLISASGDRTVRLWDVATSTATTTFSMGPDVSDQQLGCLWQGSHMLSISLSGH
INYLDANNPSKPIRVIKGHSKPVQALALNIPKDKDGQATIYTGSIDGHINHWDAKSGIND
GFAGKGHTNQVSHMAVDESNSLVSCSMDDTLRFTSLDSKEYSAQDTLKLNEQPKSVAVGP
GGCTVVICIGQILLLKDRKKAFVIEAPGFGPEAVSIHPSNGIVAVGGVDGKVHMYDIDGN
TLKKHATISALQAHGPVTDVAFSPNGAFLAVCDSNKVVSVFNTVDDYKEHGTFYGHHAKV
TCLAWSPDCQHFATGGMDMMVYVWTVEDPNNRIRIPDSHRMHHVSGIAWLDTHTLVTTSH
DATVRQWAITY
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgccctaccagctcaaaagcttgtatgccagccttccacaggtggagagaggtgttgca
aaggttatcggaggagacccgaaagggaacaacttcctctacaccaacggcaagagtgtt
atcatccgcaacatcgagaatcctgcaataagtgatgtctacacagaacattctcatcag
gtcttggtggccaagtatgcacccagcggattctacatcgcatctggagacgtgtcaggg
aagctgcgcatttgggacagcacacagaaggagcacatccttaagtatgagtaccagccc
tttggcgggaagatcaaagacatctcgtggagcgaggacagcaaaaggattgccatcgtt
ggggaggggcgggagaagtatggcgcggtgatcctgtgggactcaggttcatccgtggga
gaaatcgcaggccataccaagaccatcaacagcgtggacatccgtccaagccgcccttac
cgcctcgtgacggccagcgatgacaactgcggcgccttctaccatggcccacccttcaag
ttccaattcacgctcatggaccatacccgctttgtgaactgcatacgattttctcctgat
ggtgcaaggtttgcgacagctggagccgatggtcagatctttgtgtacgatgggacgagc
ggacagaagatctgtgccctgggaggagacaaggcgcacgatggaggaatttatgctatc
agctggagcgctgacagctctcagcttatctcggcatcgggcgaccgcaccgtgcgactc
tgggatgtggccaccagtacggcaactaccacgttcagcatgggccccgatgtgtccgac
cagcagctgggttgcctctggcagggctcccacatgctcagcatctcactgtctgggcac
atcaattacctggacgccaacaatcccagcaagcccatccgagtcatcaagggccacagc
aaaccagtgcaggccctcgcactgaacattccaaaagacaaagacggccaagccaccatc
tacactggcagcatcgacggccacatcaatcactgggatgcgaagagtggaattaatgac
ggctttgcgggaaaaggccacaccaaccaggtgtcccacatggccgtggatgaatcaaac
tcgctcgtcagctgctccatggatgacacgctgcgattcacaagcctcgactcgaaggaa
tacagtgcacaagatacactgaagctgaatgagcagccaaagtcagttgcagtgggtcct
ggtggctgcactgtggttatctgcattggacagatcttgctgctgaaggatcgcaagaaa
gcatttgtgatagaggctcctggattcggccctgaagctgtgtccatccacccaagcaat
ggcattgttgcagtcgggggtgtagatggaaaggtgcacatgtacgatatcgatggaaac
accttgaagaagcatgcaaccatatcggcgctgcaggcacacggccccgtcactgacgtg
gctttctctcccaacggcgcgttcctggctgtgtgtgacagtaacaaagtagtcagtgtc
ttcaacaccgttgatgactacaaggagcacggcacattttacgggcaccacgccaaggtg
acctgtttggcctggtctcctgactgccagcactttgccacggggggcatggatatgatg
gtctacgtgtggacagtggaagacccaaacaatcgcatcaggattccagattcacaccga
atgcatcacgtgagcggaatagcgtggctagacacccacaccctggtcaccacctcccat
gatgccaccgtcaggcagtgggccatcacttactga

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