Petromyzon marinus (sea lamprey): 116941338
Help
Entry
116941338 CDS
T09614
Symbol
FAM160B1
Name
(RefSeq) protein FAM160B1 isoform X1
KO
K26421
FHF complex subunit HOOK interacting protein 2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116941338 (FAM160B1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmrn04812
]
116941338 (FAM160B1)
Membrane trafficking [BR:
pmrn04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
116941338 (FAM160B1)
Cytoskeleton proteins [BR:
pmrn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
FTS and Hook-interacting proteins (FHIP)
116941338 (FAM160B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI16-like
DUF5917
KELAA
CHGN
Motif
Other DBs
NCBI-GeneID:
116941338
NCBI-ProteinID:
XP_032808221
UniProt:
A0AAJ7WS83
LinkDB
All DBs
Position
11:complement(12700451..12711657)
Genome browser
AA seq
812 aa
AA seq
DB search
MSQASPFTLDRAKQKFVQQKLKSRRDIREAKAKMFSKLTTILQHAVEVLAPNMPRQEDFV
YHWKAITHYYIETSDDKAPVTDTNIPAHLEQMVSILAEEETERETGETGPCMEYLLQHKI
LETLFTLSRADCPPGMKQQVLIFFSKLLGRIQQPILPHINVHRPVLKLIRLCGEVLAAPT
ENEEIQFLCIVCAKLKQDPYLVNFFMEADTLVFRIPYVNKSSNVTSSLSNSTNSGPLTDN
KTTLPDGIRSEGSTTQCGNSKPGQNERTFEEINSSPGCANAQKNAVAVGATASSGALSPA
PSGQEYNLVHSLLNLINSPDGRIAVKACEGLMLLVSLPEASAARCLTDNTALCRLLAGRL
VSLHAALPTSLDPLDLESLQTVNWGLDTYSHKEDMTAFHGKRALISFLSWLDYCDQLIKE
AHQIIATAIATTIREQYFTEVLEPKLMQTSEVGILTSTTLLTRLARQVSSPALLEQLVLF
LLGDTSGSEVPGAASRHSLRDRLIERCDHISDEISIGTLKLFETLLQKPQMHVLQNLALR
NLEERNYTEYKPPSQEDHEIAENGQIAGAVDLEEDPMFADMLSGGQGFSGSDWLSHSPVH
SPDHGKDGKTEVHKVVNSFLCLVPDEAKSSYQLEGSGYDTYLRDAHRQFRECCVACQHWD
WPVKPKAIERCNLDAPFFEGQFFKVLFDRMARILDQPYDVNLQVTSVLSKLALYPHPHLH
EYLLDPYINLAPGCRSLFSVIVRVVGDLMLRIQRIPDFSSKMMLVRRRLLGTEPEGSPID
HLTLLEGVIVLEEFCKELAAIAFVKHHAASVM
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggcctctcccttcacgctggaccgcgccaaacagaagttcgtgcagcagaag
ctgaagtctcggcgagacattcgcgaggcgaaggcgaaaatgttcagcaagctcaccacc
atcttgcaacatgccgtggaagtcctcgcccccaacatgccccgtcaagaggacttcgtg
taccactggaaagcgattacgcactattacatcgaaacctcggatgacaaggcccccgta
acggacacaaacatcccggcgcacctggagcaaatggtgtccatcctggcggaggaggag
acggagcgggagacgggcgagacgggaccctgcatggagtacctgctgcagcacaagatc
ctggagacgctcttcaccttgagccgcgccgactgcccacctgggatgaagcagcaggtg
ctgatcttcttctcaaagctgttgggaaggatccagcaacccatcctgccacacataaat
gtccaccgcccagtgttgaaactgatacggctgtgtggggaagtgttggctgccccaacg
gagaatgaagagattcagttcctgtgcatagtctgcgccaagcttaagcaggacccctac
cttgttaacttctttatggaggcagatacgcttgtgttccgaatcccatacgtgaataaa
tcttcaaacgtgacgagctccctttcaaattcaacaaattcaggccctcttacggacaac
aaaacaacactaccagatggcattcgttcggaaggcagcacaacgcaatgcggaaactca
aaacctggccaaaatgaaaggacttttgaggagataaattcttcacctggctgtgctaat
gctcagaagaatgccgtggcagtgggtgcaactgcatcttcaggagcattgtcgcccgca
ccatcaggacaagagtacaacctggtgcattcactgctcaatctcatcaatagtcccgac
gggcgcatcgcggttaaggcttgcgagggcctcatgcttctcgtgagcttgcccgaggcg
tccgcagcacgctgcctcaccgacaacacggcgctgtgtcgcctgcttgccggacgcctg
gtgtcgctgcacgccgccctgccgacctctctcgatcccctcgacctcgaatcgctgcag
accgtcaattgggggctggacacgtacagccataaggaagacatgacggccttccatgga
aagcgagcacttatctccttcctttcctggctggattactgtgatcagcttataaaggag
gctcatcagataattgctacagccatcgcaacgaccatccgagagcagtattttactgag
gttttggagccaaagttgatgcagacgtccgaggtggggatcctgacgagcacgacgctg
ctgactcgcctggcgcgacaggtgagctcgccggcgctgctggagcagctggtgctcttc
ttgctgggcgacacctccgggtcggaggtgcccggcgctgccagccgccactcgctgagg
gaccgcctcatcgaacgctgcgaccacatctctgacgagattagcatcgggacactgaag
ctgtttgagacgctgctgcagaaaccgcagatgcacgtgctgcagaacctggctctccgc
aacttggaggagcgcaactacacggagtacaagccgccgagccaggaggaccacgagata
gccgagaacgggcagatcgccggcgccgtggaccttgaggaggacccgatgtttgccgac
atgctctccggtggccagggcttctcgggctccgactggctctcccactccccggtccac
tcgcccgaccatggcaaggatggaaagaccgaagtgcacaaggtggtcaacagttttctg
tgccttgtccctgatgaggccaagtcctcgtaccagctcgagggttctggctacgacacc
tacctccgggacgcccacaggcagttccgcgaatgctgcgtggcgtgccagcactgggac
tggcccgttaaacccaaggctatcgagcggtgcaacctagacgctccgtttttcgaaggc
cagttcttcaaggtgctcttcgaccgcatggctcgcattctggaccagccatacgacgtg
aacttgcaagtgacgtcggtgctgtcaaagctggctctctacccacacccccacctgcac
gagtacctgctggatccctacatcaacctggctcccggctgccgctccctcttctccgtc
atcgttcgggttgttggggatctgatgctaagaattcagcgcatcccagacttcagctcg
aagatgatgctggtgcggaggaggctgcttggtaccgaacccgagggatctccgatcgac
catctcacgctgctggagggtgtgattgttctggaggagttctgcaaggagctggccgcc
atcgccttcgtcaaacatcatgctgcgagcgtcatgtga
DBGET
integrated database retrieval system
