Petromyzon marinus (sea lamprey): 116941348
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Entry
116941348 CDS
T09614
Symbol
CIAO1
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein CIAO1 isoform X1
KO
K24730
cytosolic iron-sulfur protein assembly protein CIAO1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116941348 (CIAO1)
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116941348 (CIAO1)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116941348 (CIAO1)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
116941348 (CIAO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_ELP1_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_Vps41
PROPPIN
B-prop_COPA_B_2nd
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
RMC1_N
Motif
Other DBs
NCBI-GeneID:
116941348
NCBI-ProteinID:
XP_032808249
UniProt:
A0AAJ7WS75
LinkDB
All DBs
Position
11:complement(12967250..12976945)
Genome browser
AA seq
337 aa
AA seq
DB search
MKGSLQVLHRLAGHQDRAWSVAWSPSGALIASCGGDKTVRVWGREGDGWVCRSVLADAHQ
RTVRNVAWSPCGTRLASASFDATTCVWSRRDGDFEVTATLEGHENEVKGVAWAPSGNLLA
TCSRDKSVWIWEVDEEEDYECASVLNSHTQDVKHVVWHPNSEVLASASYDNSIRLYREDG
DDWSSFATLEGHESTVWSIDFDATGRRLVSCGDDKTIRIWQEGAATSSGVGATWECVCTL
SGHHTRVIYDVSWCKLTGAIATASGDDTIRVFEEEAVPEGDGKSPRFYEAVCVRKAHDRD
VNCVAWSPSDPGLLASCGDDRVVAIWRYARESAASEA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcagcctgcaggtgctccacaggctcgcgggccaccaggacagagcgtggtcg
gtggcgtggagccccagtggagctctgatcgccagctgcggtggagacaagacggtgcga
gtgtggggcagggaaggcgatggctgggtgtgccgctcggttctggccgacgctcatcag
cgcacggtgcgaaatgtggcttggtctccgtgcgggacccgcttggcctctgcgagtttc
gacgctaccacttgtgtgtggagccgacgcgacggtgatttcgaggtgactgcgactctg
gaaggacatgagaatgaagtgaagggcgtggcctgggctccatcaggaaacctgctggcc
acttgcagtcgtgacaagagtgtctggatttgggaagtggacgaagaggaagactatgaa
tgcgcaagcgttctcaactcgcacacgcaggacgtcaagcacgttgtctggcatcccaac
agcgaggtgctggcgtcggcaagctacgacaacagcatccgcctgtaccgcgaggatggc
gacgactggagcagctttgccacgctggaggggcacgagtcgaccgtgtggagcatcgac
ttcgacgcgaccgggcgccgcctggtctcctgcggcgatgacaaaaccatacgcatctgg
caagagggtgcggctaccagctcgggggtcggcgccacgtgggagtgtgtgtgcaccctc
tctggccatcacacacgagtcatttacgacgtctcttggtgcaagctcacgggcgccata
gcgacagccagcggagatgacaccatccgagtgtttgaggaggaggctgtgccagaaggc
gacgggaaaagccctcggttctacgaagccgtgtgcgttcgcaaagcgcacgaccgggat
gtgaactgcgtggcgtggagtcccagtgacccggggctgctggcgtcgtgcggcgacgac
agggtggtggcgatctggcgctatgcgagggaaagcgcggcgagcgaggcgtga
DBGET
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