Petromyzon marinus (sea lamprey): 116941638
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Entry
116941638 CDS
T09614
Name
(RefSeq) pumilio homolog 2-like isoform X1
KO
K17943
pumilio RNA-binding family
Organism
pmrn
Petromyzon marinus (sea lamprey)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
FIST_C
TFIIA
Motif
Other DBs
NCBI-GeneID:
116941638
NCBI-ProteinID:
XP_032808808
UniProt:
A0AAJ7WU60
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Position
12:10213903..10234765
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AA seq
1185 aa
AA seq
DB search
MLERTGGGRRRHPPASAALRCERRPMMHASGQDGRGGGGGAMPVMAPPGPPQHQHSQQQQ
HHHHHQQQHQVVQAGRSQDDAMVGYLFERQHGEQVAGPGSKQQHQQPDQGRSVEDLNHGF
QALALEGRGMGELLPSKKFWESDDSAKDGSKSLFLGDEWRNNTWGASDHSVSQPIMVQRR
SVPGGYGSGDTSSVLSPRSEADGLGVSMVEYVLSPSPGDKLDPRARKAFGAVDQESNDVS
KVDKKGKSSPFEEDKGGELKKDDESVMKVGMAISNGIDTDLKEFSRMPGSRQESPTEVAE
RLGVVMQSSGDVLVPLAGNAVPKQCVEEFGPPETQNVPIDPLEPVSLESLQFEYSSGQVP
MDSPAANVGLFDYPTQQQLFQRVSNMQAVQQQLANSQQQQQQQQQQQQYALAAAQQQHVG
MFSAGLPPTIMHNPYIISQGPPGSDPYSAGLAAAATLAAGPAVVPPQYYGLPWGVYPANL
FQQQALNGAPNGPNQTAASQAQQGQLQILRAASGQRPLTPNQAQQGQQPGDNLTAANTQL
ALSQGLAAAAGMQGYQVIAPVAYYDQNGTLVMNPNVRAGLGAQLRLAPPTPVLINAAAAQ
QAAQSAQGPANSMANSVNSLFRPIGAQHSQHSQQQQQQQGGGNMASSPFYSNSSLSAASQ
ASSLFSQSSSSLGFGNNSSLVGAGIGSGLSAFASTGNSAMTSGSRRDSLSGSLDYKRSGS
GLAPISQSFYNGLGFSSSPGPIGMLPPNHNPGSLTPPPSLSSHGSSSSLNIGLPNGSGRF
ISAAPGAEAKYRSLSGTTSSLFGGSGSQLFPTLRPRYTHKTEMMPTGRSRLLEDFRNNRF
PNLQLRDLAGHIVEFSQDQHGSRFIQQKLERAIPAERQMVFAEILQSAYQLMTDVFGNYV
IQKFFEFGSPDQKQALAQRIRGHVLPLALQMYGCRVIQKALESIPPEQQNEMVLELDGHV
LKCVKDQNGNHVVQKCIECVPPHSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCTPDQ
TQAILEELHQHTEQLVQDQYGNYVIQHVLEHGRSEDKSKIVAEMRGKVLILSQHKFASNV
IEKCITHTSRAERALLIEEVCTMTDGPHTALYSMMKDQYANYVVQKMIDMAEPTQRKILM
HKIRPHIPTLRKYTYGKHILAKLEKYFVKNSTDLGPIGAPPNGIL
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgctggagcgtacgggcgggggccgccgccgccatccgccagcatcggccgcccttcgc
tgtgagcggcggccgatgatgcatgcaagtggccaggacggccgaggaggaggaggaggc
gccatgcccgtgatggccccaccgggccctccgcaacatcaacattctcaacagcagcag
catcatcatcatcatcagcagcaacatcaggtagtgcaggctggccgctcgcaggacgac
gcgatggttggatacttgtttgagagacagcatggagagcaggtggccgggcctggctcc
aagcagcaacaccaacaacctgaccagggtcgctccgtggaagatctcaatcatggattc
caagctttagctttggaaggaaggggtatgggtgagctcttgccatcaaagaaattctgg
gaatctgatgattctgcaaaggatggatcaaagagcctttttcttggtgatgaatggaga
aacaacacgtggggtgcatcagaccactcggtgtcgcagccaattatggttcagcggcgc
tccgtgccgggtggttatgggagcggtgacacgagctcggtgctgtctccacgctcagag
gcagatggcctcggagtgagcatggtggagtatgttctaagcccatctcctggagacaag
cttgatcccagagctagaaaagcatttggtgctgtggatcaggagtccaatgacgtctca
aaagttgacaaaaagggcaaatcttcaccctttgaggaggataagggtggcgaactgaaa
aaggatgacgagagcgttatgaaagtcggaatggcaatttcaaatgggatcgatacagat
ttaaaggaattcagccgcatgccaggtagccgccaggaatcgccgactgaggtggccgag
cgtctgggtgtcgtcatgcagtcaagtggcgatgtgctggtgccgctcgctggaaacgct
gtccccaagcaatgcgtggaagagtttgggccccctgagacgcaaaacgtgcccattgat
ccgcttgagccagtgagccttgagtcgctccagtttgagtattccagcggacaggtgcca
atggactctcctgccgccaatgtcggcctatttgactatccgacacagcagcagctattc
caacgtgtgtcaaatatgcaagctgtgcagcaacagctggccaacagccagcagcagcaa
caacaacaacagcaacaacaacaatatgcccttgcagcagcacagcagcagcatgttggc
atgttttcagctggtcttcctccaacaataatgcacaatccctacatcataagccagggc
ccaccaggaagtgacccatattctgctgggctagctgcagctgccactcttgcagcagga
cctgcagtggtacctccccagtactatggcctcccatggggggtctatcctgccaactta
ttccagcagcaggcgctaaatggagcaccaaatggtccaaaccaaaccgccgcttcccag
gcacagcaagggcagcttcagatattgagggcagcaagtggccagagaccacttactcca
aaccaagcccagcagggccagcagccaggagacaatttgacagcagccaacactcagcta
gctttaagccaaggattggcagcggcagcaggcatgcaaggttatcaggtgattgctccg
gttgcatactatgatcagaatggaactctggtgatgaatccaaatgtgcgtgctgggcta
ggtgctcagctccgtctggcacccccaacacctgtcctcatcaatgcagctgctgcccaa
caagctgcccagtcggcccaaggtcctgccaacagcatggccaactctgtaaacagtctg
ttccgcccaattggagcacagcacagccaacacagtcagcagcagcaacaacaacaaggg
ggtggaaacatggcgtcgagccccttctacagcaactcctcactgtctgctgcctctcag
gctagctccctgttctcccagagtagcagctctcttggctttggcaacaacagctccctg
gtgggtgcaggcattggatcaggtctctccgcatttgcttccactggtaactctgcaatg
acaagtggatctcggagggactcgttgtctggaagtctcgactacaagcgttcaggcagc
ggcctggctcccatcagccagtcattttacaatgggcttggattctcctcctcaccgggg
cccattggcatgctcccccctaatcataacccaggctccctcacgccaccaccctccctg
tcctctcatggatcctcatccagccttaacattgggttgcctaatggcagtggtcgcttc
atttctgcggcaccgggtgctgaggccaaatatcgcagtctgagcgggaccacgtcgagc
ctctttggcggctccgggagccagctgttcccgacactgcggccccgctacacccacaag
actgagatgatgcccactgggcgcagccgcctgcttgaggacttccgcaacaaccgcttc
cctaatctgcagctccgcgacttggcagggcacattgttgaattctcccaagaccagcac
ggctctagattcatacagcaaaagttggagagagccatcccagctgagcgacagatggtt
ttcgctgagatattgcagtcggcctaccagctcatgactgatgtttttggaaactatgtg
atacaaaagttttttgagtttggcagccctgaccagaagcaagcactcgcccagcgcatc
agaggacacgtgcttcctttggccttacagatgtacggttgtcgggttattcaaaaggct
cttgaatcgatccctcctgagcagcagaacgaaatggtcctggagttggatggccatgtc
ttgaagtgtgtcaaggatcaaaatggaaatcatgtggtgcagaaatgcattgaatgtgtt
ccaccccattctttgcaattcatcattgatgcgttcaaaggacaggtatttgctttgtct
acccatccatatggctgtcgagtgatccagcgcatcttggagcactgcactcctgatcag
acccaggccatcttggaggagctccatcaacacactgaacagcttgtgcaggatcagtat
ggaaactatgtaatacagcacgttcttgaacatggacggtcggaggacaaaagcaagatt
gttgcggagatgcgtggaaaagtcctgatactgagccaacacaagtttgccagcaatgtt
attgagaagtgcattactcacacatctcgagcggagcgtgcactcctcatcgaagaggtg
tgcaccatgacagatggcccccacactgctctctacagtatgatgaaggaccagtatgcc
aactacgtggtgcagaagatgatcgacatggccgagccaacccagcggaaaatcctcatg
cacaagattcggccgcacataccaactctgcgcaagtacacgtatggcaagcacatcctc
gccaagctggagaaatactttgtgaagaacagcaccgaccttggacctattggcgctcca
cccaacggaatcctgtaa
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