Petromyzon marinus (sea lamprey): 116941649
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Entry
116941649 CDS
T09614
Symbol
RIC1
Name
(RefSeq) RAB6A-GEF complex partner protein 1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116941649 (RIC1)
Membrane trafficking [BR:
pmrn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
116941649 (RIC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Motif
Other DBs
NCBI-GeneID:
116941649
NCBI-ProteinID:
XP_032808837
UniProt:
A0AAJ7WT45
LinkDB
All DBs
Position
1:complement(13093218..13136849)
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AA seq
1664 aa
AA seq
DB search
MYFAVGKPRRLLFPFASDESPHFVAADRERLLLAALSRSQLSVWFARPSVLVVSRRSSLK
ALAQLGAYERAAWKVDSSCIAVTTGRGYVLLFDVLLVGGEENSLYLAVDHRGSPVRRGVP
GYKDEQRVPALSLELGRVLDIQASISCLISLPDDIIATTTDGKLHHLRWDGLTNGRKALD
LCTVPFAVDLQSAAGAPLPPRPVSVRDMAFCQTLGGFAVVLTDGRAGFITAADSCTDQVL
GVWAPDVADGSCVAANNKYRLLAFGCRSGCVLVYAMDTVAGALQLSHRLELTAKDYPDMC
KRTGAVQNVRWSPDWTVLVLSWERGGLSAWSAFGAPLLCTLAADFGFHPDGSRKEPLKIS
SMSWGPEGYTLWVLTPPPDAGSDVSDGAGSKEDCGYQAELLILHFVKSALALHPCVSNQE
QVLLQGDDRLYLSCGEPPTSRPHTPSPPFLLGHRHWHIVQIHNSYLDNNWPIRHAAMDAQ
GQCVAVSGRAGLAHYSLYTRKWKLFGNITQEQSMAVTGGLVWWQDFIVAACHNLAEGQDE
LRVYPRASNLDNAHAHVQRLPAPPLLLGGSRGRLLLFCSDRQLHVYSVERSPLDVPHPGV
TLRALQRVSLQAHVPHPGLVVSVALTSMRSEKTLSSLRPAQQACAGDSVLLNVAGQLLML
QRDRSGPQPLDVSDDPTSSTSSSTSSAASLARKNPSFCAPVVLAECVEITWTTGHSAPRP
QPQPQSTPHQPQQQQQQGPATEVLWLGCGRSGMKVWLPLSPAASDGGWPAGPLHGYNHNL
NHGHRHHHHHQEQHHQQQQQHHAGSVFQHAFMSRRIMLPFPVPALYPLTVLAEHGLVLGV
TTETLPGSSSGGGGGSVADLLPFCVAERASQLYLPAVLRGLLARNLGDAAVWLARGCSSL
PYFRHALESALHAVLEEEAMARSPVPDPLLPALAKFAAAFPGFLRTVAHCARKSEVALWP
CLFAAVGSPKQLFEECLVARDLETAASYLIILQNMEAPALSRQHATLLFNSALDEGRWDL
CRNMIRFLRAIGTGGDDDGGAGAGGGGGGGAGGGGGGGGGGAAPATPPGSESSATSSSGF
EFFRHRSISLSQPPDGAPFAAPAGSAAGGATAREGSASGGSAASGTRGGPLHKALSVPDG
HVPKRAGAARAEASAVLPGAGCSPEDVFLDAMLARHARRLLEGARVRQLGRFAARLSFPL
VAWLRKERHRAARPADPVSALRGLHRDFRRPLPPAPTATPVVPGAGMPTVADLRPSCHGT
AVKPGHHAAPSGRTSSDAAAWLANPPSPIFLPTDDPAVTHDALLRATPSRPHGPTFTHEA
VLHPLPKKGDECSLGSATDATESSSLGDAEWGLLDESGAESTSDPRLNGGGGGAPPEPTG
RAAERAVTQLRYLLHVFAEAGCPEWCLLLALVLRDAGAVRAAVAAVARGGAPGVGEPGGG
GPGGGGPCDAAARLAEVVASVERWAAQCCPGYRAFLSQLQPELQALSALADSWGGGTAAA
SGGGAAGFGLPASSMAASDACNAARSPYHEGPRASGGRAGNAAAAAAAATAAPAPAPSRP
RDAGAASSAPAPIAPAWSGGGDGGERDATAAASPVSPCSPSSPMVSLSSSSSFAASSSPS
SFPPEGAEDPAGVVAGASAETAEAGTEDGPAKGAEAEEYACRIA
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgtacttcgccgtaggcaaaccacggcggcttctcttccccttcgccagcgacgagagc
cctcacttcgtggcggccgaccgcgagcggctgctgctggccgcgctgtcacggtcgcag
ctgtccgtgtggttcgccaggcccagcgtgttggtcgtgagccggcgctcgtccctcaag
gcactcgctcagctgggcgcgtacgagcgggcagcgtggaaggtggacagcagctgcatc
gctgtgacgacgggacggggctatgtgctgctgttcgacgtgctgctggtgggaggggag
gagaacagcctctacctggctgtcgaccacaggggcagcccggtgcggaggggcgtcccg
ggctacaaggacgagcagcgcgtgccggcgctgtccctggagctcggccgtgtgctcgac
atccaggcctccatctcctgcctcatctcactgcccgatgacatcattgccacgacaacg
gatggcaagctgcaccatctgcgctgggacgggttgaccaatgggaggaaggcgctcgac
ctttgcactgtgccctttgcggtcgaccttcagtcggctgccggtgcgccgctgccgccg
cgcccggtaagcgtgcgggacatggccttctgccagacgcttggtggcttcgccgtggtc
ctcaccgacggccgcgccggcttcatcaccgccgccgactcctgcacggaccaggtgctg
ggcgtgtgggcgcccgacgtggcggacgggagctgtgtcgccgccaacaacaagtaccgc
ttgctcgccttcggctgccgcagtggctgcgtgctggtctacgccatggacactgtcgct
ggagcgctgcagctgtcccatcggctggagctcacggccaaagactaccccgacatgtgc
aagcggacgggcgccgtgcagaacgtgcgctggagtcccgactggacggtgctcgtgctg
agctgggagcgtggaggcctctcggcgtggagcgccttcggagcgccgctgctgtgcacc
ctcgctgccgacttcggattccatcccgatggaagccggaaggaaccattaaaaatcagc
tctatgagctggggccctgagggttacaccctgtgggtgctcacgccgccccctgacgca
ggaagtgacgtcagcgatggggcaggaagtaaagaggattgtgggtaccaggcggagctg
ctgatcctgcactttgtgaagagtgcgctggccctgcacccgtgtgtgagcaatcaggag
caggtgttgctgcagggcgacgatcggctctacctgagctgtggggagccccccacgtcc
aggcctcacactccgagcccccccttcctgctcggacacagacactggcacatagtgcag
atccacaactcttacctggacaacaactggcccattcggcacgccgctatggacgcccag
ggccagtgcgtggccgtgtcgggccgtgccggcctcgcccactactcgctctacacccgc
aagtggaagctctttggcaacatcacccaggagcaaagcatggcggtgacgggcggcctg
gtgtggtggcaggacttcatcgttgccgcctgccacaaccttgccgaggggcaggacgag
ctgcgtgtgtatccgcgcgcctccaacctggacaacgcccatgcccacgtgcagcggctg
ccggcgccgccgctgctgctgggcggctcccgcgggcgcctcctcctcttctgctccgac
cgccagctgcacgtctacagcgtggagcgcagccccctcgacgtgccgcaccccggcgtg
acgctgcgggccctgcagagggtctccctgcaggcccacgtgccccacccgggcctcgtg
gtgtcggtggccctcaccagcatgcgctctgagaagacgctttcctccctgaggcccgca
cagcaggcgtgtgcgggagacagtgtgctgctgaacgtcgccgggcagctgctcatgctg
cagagagatcgctcggggccgcagcccctggacgtgagcgacgatccgacctcctccacc
tcctcatccacctcctcggcagcgtccctcgcacgcaagaacccgtcgttctgcgcgccg
gtggttcttgccgagtgcgtggaaatcacgtggacgaccgggcactccgctcccaggcca
caaccgcagccgcaatccacgccgcatcagccgcagcagcagcagcagcagggcccggcc
acagaggtgctgtggttaggctgcggccgttccggcatgaaggtgtggctccccctttcg
ccggccgcctcggacggcggctggcccgccggcccccttcacggctacaaccacaacctc
aaccacggccaccgccaccaccaccaccaccaggaacagcaccaccagcagcagcagcag
catcacgcgggcagcgtgttccagcacgcgttcatgtcgcgccgcatcatgctgccgttc
cccgtgccggcgctctacccgctgacggtgctcgccgagcacggcctggtactgggggtc
accaccgagacgctgccgggatcctcgtccggcggcggcggcggcagcgtggccgacctg
ctgccgttctgcgtggcggagcgtgcgtcgcagctctacctcccggccgtgctgcgggga
ctactggcgcggaatctcggcgacgcggcggtgtggctggcccgcggctgctcctcgctg
ccgtacttccggcacgcgctggagtcggcgctgcacgccgtgctcgaggaagaggcgatg
gcgcgctcccccgtgccggaccccctgctgccggcgctcgccaagttcgcggcggccttc
ccgggcttcctgcgcaccgtcgctcattgcgcccgcaagtccgaggtggcgctgtggccc
tgcctgttcgccgccgtgggcagccccaagcagctgttcgaggagtgcctggtggcgcga
gacctcgagaccgccgcttcctatctcatcatcctgcagaacatggaggcgccggcgctg
agccgccagcacgcgacgctgctcttcaactcggcgctggacgagggccgatgggacctg
tgccgcaacatgatccgcttcctgcgtgccatcggcaccgggggtgacgacgatggcggc
gccggcgccgggggaggaggaggagggggggccggcggcggcggcggcggcggcggcggc
ggcgcggcgccagccacgccgcccggctccgagtccagcgccacctcctcgtccggcttc
gagttcttccgccatcgcagcatcagcctctcgcagccgcccgacggagcgccgtttgcc
gcgccggcgggatcggccgcgggtggggcgacggccagggagggcagcgccagcgggggc
agcgcagcctcgggcacgcggggcgggccgctgcacaaggccctgagcgtgccggatggc
cacgtccccaaacgcgccggcgcggcgcgggcggaggcttcggcggtgttgccgggcgcc
ggctgctccccggaggacgtcttcctggacgccatgctggcgcgccacgcccgccgcctg
ctggagggcgcccgcgtgcgtcagctgggccgcttcgccgcccgcctctccttcccgctc
gtggcgtggctccgcaaggagcgccaccgcgccgcccggcccgccgaccccgtgtcggcg
cttcgcggcctccaccgggacttccggcgccctctgccgccggcgccgacggcaacgccg
gtcgtgccgggcgccggcatgccgacggtggcggacttgaggccgtcatgccacgggacc
gccgtgaagcctgggcaccacgcagcgccatccgggcgaacgtcatccgatgctgccgcc
tggctcgccaatcccccgtcacccatctttctgcctaccgatgaccccgccgtcacccac
gatgcactgctccgggccaccccctctcggccgcacggtcccacgtttacccacgaggcc
gtgctgcatcctctccccaagaaaggggacgagtgcagcctgggctcggccacagacgcc
acggagagcagctccctgggagacgccgagtggggcctcctggacgagtcgggagccgag
agcacctccgacccccgcttgaacggtggtggcggaggggcgcctcccgaaccaacgggc
agagcggcggagagggcggtcacgcagctgcggtacctgctgcacgtgtttgccgaggcc
ggctgccccgagtggtgcctcctgctggctctggtgctgcgcgacgccggcgccgtgcgg
gcggcggtggcggcggtggcgcgggggggggcgcctggagtgggggagccgggagggggg
gggccgggcggtggggggccttgcgacgcggcggccaggctggcggaggtggtggcaagc
gtggagcgatgggcagcgcagtgctgccccggctacagggccttcctctcgcagctccag
ccagagctgcaggctctgtcggcgctcgccgactcctgggggggcggcaccgccgcggcg
tccggcggcggcgcggccggattcggcttgccagcgtcgtcgatggcggcgtcggacgcg
tgcaacgccgcacggagcccgtaccacgagggaccgcgagcgtcgggcggccgcgccggc
aacgccgccgccgccgccgccgccgcgaccgccgcgcccgcgccggcaccctcgcgccca
cgcgatgccggtgccgcctcgagcgccccggcgccgatcgcgccggcgtggagcggtggc
ggcgacggcggggagagggacgccacggccgcggcgtctcccgtctcgccgtgctctccc
tcgtcgccgatggtgtcgctgtcgtcctcgtcctccttcgccgcctcctcctccccgtcc
tcgttccccccggagggtgccgaggacccggcgggcgtcgtcgccggggcgagcgcggag
acggcggaagccgggacggaggacgggccggcgaagggcgccgaagcggaggagtacgcc
tgccgcatcgcgtga
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