Petromyzon marinus (sea lamprey): 116941671
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Entry
116941671 CDS
T09614
Symbol
VPS28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116941671 (VPS28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116941671 (VPS28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmrn04147
]
116941671 (VPS28)
Membrane trafficking [BR:
pmrn04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
116941671 (VPS28)
Exosome [BR:
pmrn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116941671 (VPS28)
Exosomal proteins of other body fluids (saliva and urine)
116941671 (VPS28)
Exosomal proteins of colorectal cancer cells
116941671 (VPS28)
Exosomal proteins of bladder cancer cells
116941671 (VPS28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
116941671
NCBI-ProteinID:
XP_032808871
UniProt:
A0AAJ7T046
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All DBs
Position
12:complement(12741226..12750554)
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AA seq
220 aa
AA seq
DB search
MFRGVAAGNAAPANNPELYEEVKLYKNAREREKFDNMAELFAVVKTLQALEKAYIKDCVT
PNEYTAACSRLLVQYKAAFKQVQGSEFQNIEEFCRKYRLDCPLAMERIKEDRPITIKDDK
GNLNRCIADIVSLFITVMDKLRLDIRAMDEIHPDLRELMETMNRMSSIPSDFEGKEKVRT
WLQTLGAMSASDELDDSQVRQMLFDLESAYNAFNRHLHAS
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtggggttgctgctggaaacgctgcacctgccaacaatcctgagctgtatgag
gaagtaaagctgtacaaaaatgcgcgcgaaagagaaaagtttgacaacatggcagagctc
tttgctgttgtgaaaacactccaagctcttgagaaagcctacataaaggactgcgtgact
ccaaatgagtacaccgcagcctgctctcggctacttgtgcagtacaaagctgccttcaag
caagtgcagggctctgaatttcagaacattgaggaattctgtaggaagtacaggcttgat
tgcccacttgcaatggaaagaatcaaggaagatcgaccgataaccatcaaagatgataaa
ggaaatttgaacagatgtattgcagacattgtttcgctcttcatcacagtgatggacaaa
cttcgcctggatataagagccatggatgagatacatcctgacttgagagagctgatggag
accatgaaccgcatgagctcgattccgtcggactttgagggaaaagagaaagtgagaacc
tggctgcagacactgggcgccatgtcagcgtcagacgagctggacgactcacaggtgcga
cagatgctctttgacctggagtccgcctataatgccttcaaccgtcatctgcatgcctcc
tag
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integrated database retrieval system
