Petromyzon marinus (sea lamprey): 116941693
Help
Entry
116941693 CDS
T09614
Symbol
MIB1
Name
(RefSeq) E3 ubiquitin-protein ligase MIB1 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116941693 (MIB1)
Enzymes [BR:
pmrn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116941693 (MIB1)
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116941693 (MIB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
SH3_15
Ank_5
Ank_4
MIB_HERC2
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
zf-C3HC4_2
Sina_RING
Prok-RING_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
116941693
NCBI-ProteinID:
XP_032808915
UniProt:
A0AAJ7T0F9
LinkDB
All DBs
Position
12:complement(13808329..13885358)
Genome browser
AA seq
1011 aa
AA seq
DB search
MASRNNRVVTEGVGARIVRGPDWKWGKQDGGEGHAGTVRSFESPEEVVVVWDNGTAANYR
CSGAYDLRILDSAPTGIKHDGTMCDTCRLQPIIGIRWKCAECTNYDLCTACYHGDKHHLR
HRFYRITTPGSERVLLESRRKSKKITSRGIFPGARVVRGVDWQWEDQDGGNGRRGKFASS
AQVTEIQDWSAASPRSAAYVLWDNGAKNLYRVGFEGMSDLKCIQDAKGGSFYRDHCPVLG
ELNGSRNPGGLQISDLVNIDLELEIVQSLQHGHGGWTDGMFETLSTTGTVCGIDEDHDIV
VQYPSGNRWTFNPAVLTKANYVRGPEGASHGAEGGSSASQFTVGDVVQICGDLERVKLLQ
RGHGEWAEAMLPTLGKVGRVQQIYHDNDLKVEVCGTSWTYNPAAVTKVSSELPGTSNPSG
ERLSQLLKKLFETHVSGDVNEELVKASANGDVAKVEEILSRPDADQANGQFAGHTALQAA
SQNGHVDIIKALLKYNVDLEAEDKDGDRAVHHAAFGDEGAVMEALQRGGADLNARNKRRQ
TPLHIAVNKGHLQVVKTLLDLDSHPSLQDSEGDTPLHDAISKKRDDMLSVLIDAGADVSL
TNNNGFNALHHASLRGNPSAVRVLLSKLPRPWIVDEKKDDGYTALHLASLNNHVEVAELL
IHQGSANLDIQNQNQQTALHLAVEREHTQVVRLLVRAGAKLNAQDKDGDTPLHEALRHHT
LSQLRQLQDMQEVGKLLMGLGNQGAEKKNSASIACFLSANGADLSLRNKKGQSPLDLCPD
PNLCKALSKCHREKNSPQASCRSPSGGGESGGESHEECMVCSDLKRDTLFGPCGHIATCS
LCSPRVKKCLVCKEPVQSRTKIEECVVCSDKRAAVLFQPCGHMCACDNCASLMKKCVQCR
STVDVRVPFSVCCGSKASDEEEEEDEDDPYSGMGNMQPLQKDKDNTNMNADIHKLQQQLQ
DIKEQTMCPVCLDRLKNMIFLCGHGTCQLCGDRMSECPICRKSIERRVLLY
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccgcaacaaccgcgtggtgaccgagggtgttggggctcgcatcgtccgcggg
cccgactggaagtggggcaagcaggacggaggcgaaggccacgccggcaccgtgaggagc
ttcgagagccccgaggaggtggtggtcgtgtgggacaacggcaccgccgccaactaccgc
tgctcgggcgcctacgacctgcgtatcctggacagcgcgcccacaggaattaagcacgat
ggcacaatgtgtgatacctgccgcctgcagcccatcatcggtatccgctggaagtgtgcc
gagtgcaccaactacgacctgtgcacggcatgctaccacggggacaaacaccacctgcgt
caccgcttctaccgcatcaccacgcccggcagcgaaagggtgctgctggagtctcgccgc
aagtctaagaagatcacgagccgcggcatcttccccggtgcgcgcgtcgtgcgtggggtc
gactggcagtgggaggaccaggacggggggaacgggcgcagaggaaagttcgcctcttcc
gctcaggtgacggagatacaggactggagcgccgcgagtccgcgcagtgccgcctacgtg
ctgtgggacaatggcgccaagaacctgtaccgcgtgggcttcgagggcatgtcggatttg
aaatgtatccaagacgcaaagggtggatccttttacagagatcactgcccagtgttgggc
gagctgaacgggagccggaatcccggcgggctgcagatcagcgacctggtgaacatcgac
ctggagctggagattgtgcagtcgctgcagcacggccacggcggctggacggatggcatg
ttcgagacgctctccaccaccggcaccgtgtgcggcatcgacgaggaccacgacatcgtc
gtgcagtaccccagcggcaacaggtggaccttcaacccagcggtgctgaccaaggccaac
tatgtgcgcgggccggagggcgcgagccacggagccgagggcggctcctcggcctcgcag
ttcacggtgggcgacgtggtgcagatctgcggggacctggagcgcgtgaagctgctgcag
cgcggacacggggagtgggcggaggccatgctgccgaccctcggcaaggttgggcgcgtg
cagcagatttaccatgacaacgacctgaaggtggaggtttgtggcacgtcctggacctac
aacccggctgcggtcaccaaggtgtcctccgagctgcctggcaccagcaacccgtctgga
gagcgtctgtcgcagctgctcaagaaactgtttgagacgcacgtgtctggagacgtcaac
gaggagctggtcaaggcttcggccaacggcgacgtggccaaggtggaggagatcctgtcc
cgacccgacgctgatcaggccaacgggcagtttgcggggcacacggcactgcaggcagcc
agccagaatgggcacgtggacatcatcaaggctctgctcaagtacaacgtggacctggag
gccgaggataaggacggggaccgcgccgtccaccacgcggccttcggggacgagggcgcc
gtcatggaggcgctgcagcgcggcggcgccgacctcaacgctcgcaacaagcggcgccag
acaccgctgcacatcgccgtcaacaagggccacctgcaggtggtgaagacactgctcgac
ctcgacagccaccccagcctgcaggactcggagggtgacactccgctgcacgacgccatc
agcaagaagcgggacgacatgctgtccgtcctcatcgacgccggcgcggacgtgtcgctc
accaacaacaacggcttcaacgcgctgcaccacgcctcgctgcgcggaaaccccagcgcg
gtgcgggtgctgctctcgaagctgccgcgaccgtggatcgtggacgagaagaaggacgat
ggctacacggcgctgcacctcgcctcgctcaacaaccacgtggaggtggccgagctgctg
atccaccagggcagcgccaacctggacatccagaaccagaaccagcagacggcgctgcac
ctggcggtggagcgagagcacacgcaggtggtgcggctgctggtgcgtgctggggccaag
ctgaatgcacaggacaaggatggggacacacccctgcacgaggccctgcgccaccacacc
ctgtcgcagctgcgtcagctgcaggacatgcaagaagtgggcaagctgctgatgggactc
gggaaccagggcgcggagaagaagaactcggcctccatcgcttgcttcctgtccgcaaac
ggcgctgacctgtccctgcgaaacaagaaggggcagtcgcccctcgacctttgccccgac
cccaacctttgcaaggcgctgtccaagtgtcaccgtgagaagaacagcccgcaggcgtcg
tgccgcagcccgtcgggcgggggggagagcggcggggagtcgcacgaggagtgcatggtg
tgctccgacctcaagcgcgacacgctcttcgggccgtgcggccacatcgccacgtgctcg
ctctgctcgccgcgcgtcaagaagtgcctcgtgtgcaaggagcccgtgcagtcgcgcacc
aagatcgaggagtgcgtcgtgtgctcggacaagcgggctgccgttctcttccagccgtgt
ggtcacatgtgcgcctgcgacaactgcgcgagcctcatgaagaagtgcgtgcagtgccgc
tccacggtggacgtccgcgtgccgttcagcgtgtgctgcggcagcaaggcgagcgacgag
gaggaggaagaggatgaggacgacccctacagtggcatgggaaacatgcagccgctgcag
aaggacaaggacaacacgaacatgaacgctgacatccacaagctgcagcagcagctgcag
gacatcaaggagcagaccatgtgtcccgtgtgcctggaccgcctcaagaacatgatcttc
ctgtgcgggcacggcacgtgccagctctgtggggaccgcatgagcgagtgtcccatctgc
cgcaagagcattgagcgccgggtgctgctctactga
DBGET
integrated database retrieval system
