Petromyzon marinus (sea lamprey): 116941707
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Entry
116941707 CDS
T09614
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2-like
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116941707
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
116941707
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GFIT
Motif
Pfam:
UBA_4
Exo_endo_phos
UBA_8
Exo_endo_phos2
PG_binding_1
Motif
Other DBs
NCBI-GeneID:
116941707
NCBI-ProteinID:
XP_032808940
UniProt:
A0AAJ7WT27
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All DBs
Position
12:14180070..14186799
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AA seq
362 aa
AA seq
DB search
MEGAAEERLCAEFRSITGADRGLAKRYLGRAAWDLQHALNTYFEGDTDPGSSVASAMQPP
PVEVLDVSSDLEVIEENSLPPNLHSASGGDEGSLSLLCWNLDGLMEEQIQLRARGACNII
ALHSPDVVYLQELVPPYLGYLQQRATSYHIIPADEQGYFTAVMLKKSRVRLISHEVIPFP
TSVMGRNLLAVRAEVSGVPLYLLTSHLESTVSHTKERVRQLQQVLQRMALAPSNATTIFG
GDTNLRDKEVSQIGGLPPGVGDVWELLGRPEETRYTWDTTLNDNLKLGGARSSRLRFDRL
FYQQPLTARSPGPSSLPGGGGGGGVDATVVPRSLRLVGTERLACGKFPSDHWGLLAHFDL
VL
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgcggccgaggagaggctctgcgccgagttcaggagcatcacgggcgcggac
cgcggcctcgccaagcgctacctgggccgggccgcctgggacctgcagcacgccctgaac
acctactttgagggggacactgacccgggcagctcggtggcttccgcgatgcagccgccc
cccgtggaggtgctggacgtgagctccgacctggaggtcatcgaggagaactcgctgcca
cccaacctgcacagtgctagcggcggggacgaggggtctctgtcgctgctctgctggaac
ctggacgggctcatggaggagcagatccagcttcgagctcgtggggcctgcaacatcatc
gcattacactctcccgacgtggtttatctgcaagagctggtgcctccctacctcggctac
ctgcagcagcgagccaccagctaccacatcatccccgctgatgagcagggctacttcact
gccgtgatgctgaagaaatctcgcgtgcggctcatctcccacgaggtcatcccctttcct
acctccgtcatggggcgcaacctactggcggtcagggcggaggtgtcaggggtgccgctg
tacctgctgacgtcacatctggagagcactgtctcacacaccaaggagcgcgtgcgccag
cttcagcaggtgctgcagaggatggcgctcgcgcctagcaacgccaccaccatcttcggg
ggcgacaccaatctgagggacaaggaggtgtctcagataggggggttgccccccggcgtg
ggcgacgtgtgggagctgcttggccgccccgaggagacgcgctacacctgggacaccacc
ctcaacgacaacctcaagctggggggcgctcgctcctcccgcctgcgcttcgaccgcctc
ttctaccagcagccgctcacagctcgctcgcccggaccttccagcctacccggtggcggc
ggcggtggcggcgtggacgccacggttgtgccgcgctcgctgcgcctcgtggggaccgag
cgactggcatgtgggaagttccccagcgaccactgggggttgctggcgcactttgacctg
gtgctgtag
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