Petromyzon marinus (sea lamprey): 116941727
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Entry
116941727 CDS
T09614
Name
(RefSeq) uncharacterized protein LOC116941727
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn02010
ABC transporters
pmrn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116941727
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116941727
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmrn02000
]
116941727
Transporters [BR:
pmrn02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
116941727
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
ABC2_membrane_2
AAA_23
Motif
Other DBs
NCBI-GeneID:
116941727
NCBI-ProteinID:
XP_032808974
UniProt:
A0AAJ7T0N9
LinkDB
All DBs
Position
1:21031475..21089025
Genome browser
AA seq
2786 aa
AA seq
DB search
MAFWTHLRLLLWKNFTLRKRQKVRLLLELTWPLFLFVILVLVRNTQLPYRQHQCFFPNKP
LPSAGALPWLQGVLCNANNPCFSQPTPGETPGQLNNFGGDIQHLLSNETQMERFDEALED
VRGLSHLAETLRYQPDVVAGRGVRVRDFLREDENLTLFMQRDMGLPRQVSTEILEMRVRL
EQFVEGIPSLSLKEIVCDDQLLRRFLVFRWARARSTVRSALCLLPQPRLQQLEDVLYANV
DFYRLLREVGAMRQRMPFVLDDVSPRLSADGWREFTSLQSFTSLRREASFLNSLGLAENT
SDGLREEQVGPVLSSLSGLLCGHPEAGGRQILSLNWYEDNDYKTFLGIDDDDVGGGNDEE
RQGGRRRHQYDNSTTPFCNALLQSLQTNSASRFAWTMLQPLLQGKILYSPDTPATRSIMH
EVTALSPMPPQPPLLLLLLAVVEANRTFAELEMIYKFGLAWEEVAPQIWDFLNSSLALRL
LRETLGNVAVATFVDSQLSDTGLDARTIADFLSAGPSRERGNGTAPGWREMFTVVDVAIR
SLTRFLEQQHNSHTYRTHEPLNTHMKTSPASLSRRSLNLRSPNVWQCMELDKLEGVQDEP
GLERRALELLEEQKLWAGVVFLDLFSPSALPQHLRYKIRTDIDRIERTSKSRDRYWDPGP
RADAAEDMSYIWGGFAYLQDMVERGIVQAQTGAATIGLYLQQMPYPCFVDDVFTKSISNI
LPMFMTLAFILPVCLTIKSIVWEKECRLKEVLRASGLGRGTLWAAWFIDSALIMVVSCTL
LAVIIKYGKVLQYSDPLVLFLFLTVFAIATVSQCLLLSVFFSRANLAAACGGLAYFLLYL
PHILCFVWQDYLTFPIKMGVSLLSTVAFGFGCESISRLEEQGIGIQWHNLASNPAAGESY
TLLISLLMMLCDAVLYGILTWYIEAVFPGQYGVPKPWHFPFTSCVATLSPQSPQGTTSSK
PMAGEPHPAGTLHVYAYSPLFNPLLDEGGLPHHAVAACVGYSITYAAAGRCAFGEGGEQR
RGSVQVPLSNAVVSDVCFGYTHLPLSFSPPSCFSASSSQTATKSSAKGSSATGPATIATT
NRKGSKQPEASQGEKVAQKGGGQEERNSGENGGGDKGNPGGGGGTEKRDSGKRGNREAEV
SGTAVNHDRRVAWSAEERASKKGKRSARCSQGKGQGSGGMSRSKEKKSTMKATKRTNAQP
DGHLNREEVLVEEESVELTLGVSVQSLVKKYSTMKRPAVDGLSLNFYQDQITSFLGHNGA
GKTTTMSILTGLFPPTSGTALIYGKDIRTEMESIRSSLGTCPQHNVLFNQLTVEEHIWFY
ARLKGCSSEDAKEEVERMLEDTGLLMKRAEHAENLSGGMQRKLSVAMAFVAGSRLVILDE
PTAGVDPFARRGIWELLLKYKHGRTIILSTHHMDEAETLGDRIAVIARGRLRCCGSPLYL
KSCYGTGYYLTVVRSSADVVGPSGKGQQQPAEMPGKSGGGGGGGNLDTNEDEVKLALVES
CACILSHSFCLSFTHLLSRLITHSLVYFFTCSFTQSFANSTFNSLTASLLNLLTHACYLS
LTNLFTRSHTHSPTQQEDEYAGRLPSATEAFCWKHRDTSEPLTTVAPPPPLPGEVLILQN
LVERLVPGARVVENVGQEVTFMLPYTGARDGSFALLFSHLDSKLEGLGISSYGVSDTTME
EIFLKVAEDPSLETEHKDEGVSTKGKWRWWKEKNILSPSKTKEDMDIELERRLEEKKAKR
QKKLNLGGGGSDHMITGGPLAWQQFRALIIKRFHHTRRSRKGFLSQIILPAVFVCLALVF
TMIVPPFADYPELELQPWMYPEQFTFYSDDAPNDLTTQKLVAAILDPPGLGTRCMIGYSI
PNLPCQPRMPVWETPQASQAAVDALNEGNWTFEDPSPSCRCSTPERLTMLPDCPPGAGGL
PPPQARRGLAESSAKLPKLNKVGDSASARSRGAVHHGCRGVLLNKSRCATGSMIPAVVVS
FTVSPPSQMLQSTTDTLQNLTGRNISDYLVKSYADFIEKSLTRKYWVNEPRYGGFSLGQK
NEQRDVNATALRRLFQQAGGFLNITAGPAIEEASLNLEGFIQALGPTDNVKVWFNNKGWH
AIVAFINVASNAVLRARLPEGKDPRRFGITAYNHPLNLTKQQLTEVAMLMSSVDVMVSIC
VIFSMSLIPASFAVFLVQERASNAKHLQFVSGVNAYVYWLANITWDMCNYILPAIIVVVI
FLSFQQKAYVSDRNLPALILLLLLYGWSITPLMYPASFVFTVPSTAYVVLTCVNLFIGIN
GSMATFILELFKGDETLTRVNDILKSVLLIFPHFCLGRGLIDMATNQALADASERFGENR
FKEPLSWDMVGKNLFAMFIEGSVFIVLTLLIQKNFFIRPRSMKLNLPPITDEDVDVAAER
KRVMEGDTSTDILTINELTKVYKKKGAPAVDRMCVGVRPGECFGLLGVNGAGKTSAFRML
TGDTHATAGDARLEGYSILSQLSSVQSRLGYCPQFDGTDELLTGREHLQLYARLRGVREE
DLERVVEWAVSTLGLIYIADRSAGSYSGGNKRKLSTAIALIGNPPLVFLDEPTTGMDPKA
RRFLWNCILAIVQAGRSVVLTSHSMEECESLCTRMAIMVSGTFRCLGSVQHIKTRFGEGH
TLVIRLAAGTPPAAAVTADPAAADTADAAAADPAAAVAAAAAAATRVAEYVCKRFPRTEL
RERHHRTMYFHLPGAITTHGASGASAGATATASACATLSTIFAALSENQQQLGIADFSVS
QTTLDQVFVSFARQQWTDPVDEETGM
NT seq
8361 nt
NT seq
+upstream
nt +downstream
nt
atggctttttggactcacctgcgtctgttgctgtggaagaattttactttgagaaaaaga
cagaaggtccgcctcctgctggaactaacatggccactctttctcttcgtcatcctcgtg
ttggtgcggaatacccaactgccctacaggcagcaccagtgcttcttccccaacaagcca
ctgccatcggcaggcgccctgccctggctccagggggtcctgtgcaacgccaacaacccc
tgcttctctcagcccacgcccggagagacgcccgggcaactaaacaacttcgggggtgac
atccagcacctgctctccaacgagacgcagatggagcgatttgacgaggccctggaggac
gtgcggggtctgagccacctggcggagactctgcgctaccagcccgacgtcgtggcaggg
agaggggtgcgggtgagggatttcctaagggaagatgagaacctcacgttgtttatgcag
agagacatgggcttgccgagacaagtatccaccgagatcctggagatgcgagtccgcctg
gagcagtttgtggaggggattccgtcgctgtctctgaaggagattgtgtgcgacgatcag
ctgctgcgccgcttcctcgtgttccgttgggcgagagcacgttccaccgtgcgctccgcc
ctctgcttactgccccagcctcggctccaacagctggaggatgtcctctacgccaatgtg
gatttctacagactcctgcgggaggtgggagccatgcggcagaggatgccctttgtgctg
gacgacgtgtctcctcgtctgtccgcggacggctggagggagttcacatcgctgcaaagc
ttcacgtcgctgaggagggaggcttccttcttgaacagcctgggcctggctgagaacacg
agtgacggcctgcgtgaggagcaggttgggccggtgctgtcatcgctttcaggtctcctg
tgcggacaccccgaggcgggcgggcgccagatcctctcgttaaactggtacgaggacaat
gactacaagaccttcctgggcatcgatgatgacgacgttggtggtggcaacgacgaggag
cggcagggaggcagacgccgacatcagtatgacaactcaacaaccccgttctgtaacgcc
ctgctgcaaagcctgcagacgaacagcgcgtcacgcttcgcctggaccatgctccagcca
ctgctccagggcaagatcctgtactcgccggacacgccagccacccgcagcatcatgcac
gaggtaaccgcactgtcaccgatgccgccacagccgccactgctgctgttgctgctggcg
gtggtggaggcaaaccgcacattcgcagagctggagatgatctacaagttcgggcttgcg
tgggaggaggtcgcgccccagatctgggacttcctcaacagcagcttggccctgaggcta
ctcagagagaccttggggaacgttgcggtggccaccttcgtcgactcccaactctcggac
accgggctggatgccagaaccattgccgacttcctctctgcgggtccatcgagggagcga
ggcaatggcacggcgccggggtggagggagatgttcacggtggtggacgtcgccattcgc
tcgctcacccgtttccttgagcagcagcacaactcacacacataccgtacacacgaaccc
ttaaatacacacatgaaaacttcgccggcctcactcagtaggcgctcgctaaatctgcgc
tcaccaaacgtgtggcagtgcatggagctggacaagctggagggggtgcaggacgagccc
gggctggagcgccgggcactggagctgctggaggagcagaagctctgggccggcgtagtc
ttcctggacctcttctctccctccgccttgccgcagcacctgcgctacaagatccgcacc
gacatcgaccgcatcgagaggacaagcaagagccgagaccgctactgggacccgggccct
cgcgcagatgcagctgaggacatgagctacatctggggtggctttgcgtacctgcaggac
atggtagagcgcgggatcgtgcaggcgcagacgggcgcggccaccattggcctctacctg
cagcagatgccgtacccctgcttcgtcgatgacgtcttcaccaagtccatcagtaacatc
ctgcccatgttcatgacgctcgcgttcatcctgcccgtgtgcctcaccatcaagagcatc
gtctgggaaaaggagtgccgcctcaaggaggtgctgcgggcctcgggcctaggccgcggc
acgctgtgggccgcgtggttcatcgacagcgcgctcataatggtcgtctcctgcaccctc
ctcgccgtgatcatcaagtacgggaaagtgctgcagtacagcgaccctttggtgctcttc
ctgttcctgacggtgttcgccattgcgaccgtgtcgcagtgcttgctgctcagcgtcttc
ttctccagagccaacctcgcagcggcgtgcggaggcctcgcctatttcctgctctacctc
ccgcacatcctgtgcttcgtgtggcaggactacttgaccttccccatcaagatgggagtc
agtttactttcgaccgtagcctttggctttggatgtgaaagcatctcccgcctggaggag
caaggaatcggaatccagtggcacaacctggcatcgaacccggcggccggagagtcgtac
accctgctcatatccctgctgatgatgctgtgcgacgcggtcctttatggcatcctcacc
tggtacatcgaggccgtgttcccaggacagtacggagtccccaagccgtggcatttcccg
ttcacgagctgcgtcgccacgctgagccctcagtccccacaggggacgacctcctccaaa
cccatggctggtgagcctcacccggcggggactctacacgtgtacgcgtacagccccttg
ttcaatccactgctggatgaggggggcctcccccaccacgccgttgcagcttgtgtgggt
tattcgataacctacgccgccgctggtcggtgtgcgtttggtgaaggtggagagcagagg
cgtgggagcgtacaagtacctttgtctaacgctgttgtatcggacgtgtgtttcggctac
acgcatttacctttgtctttctctccgccttcatgtttctccgcctcatcttctcaaact
gcaacaaaatcgtcagcaaaaggaagttcggccacgggtcctgcaaccattgccacgaca
aacagaaaaggctcgaagcagccagaggccagccagggtgagaaagtggcacagaaaggg
ggtggccaagaagagaggaattctggggaaaatggcggtggtgacaagggaaatcctggg
ggaggaggcggcactgagaaaagggattctgggaaaaggggcaaccgtgaagcagaggtt
tctgggacagcggtcaatcatgacaggcgggtggcatggtcagctgaggagcgggcatcc
aagaagggaaaaaggagtgcccggtgttcccaagggaagggccaaggaagcggtggaatg
agccggagcaaggagaaaaagtccacaatgaaggcaacaaaacgaacaaacgctcaaccc
gacggacatctgaacagggaggaggtccttgtcgaggaggagtcagtggagctcacactg
ggagtgagcgtgcagagcctggtgaagaagtactcgacgatgaagcgcccggctgttgac
gggctgagcctgaatttctaccaagaccagatcacgtccttcctggggcacaacggagca
gggaagacaacgaccatgtccatcctaacggggctcttccccccgacgtccggcacggcc
ctcatctacggcaaggacatccgcacagagatggagtcgattcggagcagccttggcacc
tgcccccaacacaacgtgctcttcaaccagttgaccgtggaggagcacatctggttttac
gcgcggctcaagggctgctcatcagaagacgcgaaagaggaggtggagcgcatgctggag
gacacagggctgctgatgaagagagccgagcatgcggagaacctgtccggtgggatgcag
cggaagttgtcggtggcgatggcgtttgtggctggctctcggctcgtgattctggacgag
ccgaccgccggagtcgatcccttcgctcgccgtggcatctgggagctcctactcaagtac
aaacatggccgcaccatcatcctgtcgactcaccacatggacgaggcggagacgctgggc
gaccgcatcgcggtgatagcgcgcgggcggctccggtgctgcggctcccccctctacctg
aagtcctgctacggcacgggctactacctcaccgtggtgcgcagcagcgccgacgtggtg
ggcccgagtggaaagggccagcagcaaccggcagaaatgccggggaaaagcggcggaggt
ggtggcggtggaaacttggatactaacgaagacgaggtgaaacttgcacttgttgaatca
tgcgcttgcatcctcagtcactcgttctgtctttccttcactcatttgctttctcggctg
atcactcattcacttgtttactttttcacttgctcatttactcaatcgtttgccaactca
acctttaactcactcactgcctcgttattaaatttgctcactcatgcatgttatctctcg
ctcactaacttatttacgaggtcacacactcattcacccacccagcaggaggatgagtat
gccggcaggttgccatcggcaacggaggcgttctgctggaagcacagggacactagcgaa
cctctcaccactgtggcgccccccccccccctcccaggcgaggtcctgattctgcagaac
ctcgtggagaggctggtgcccggtgcccgcgtggtggagaacgtgggccaggaggtgacg
ttcatgctgccgtacaccggagcccgcgacggctctttcgcgctcctcttcagccacctc
gactcgaagctcgagggcctgggcatctccagctatggggtctcagacaccaccatggag
gagatttttctaaaagtggcagaggatccgagcctggagaccgaacacaaagatgaaggt
gtctccacgaagggcaaatggaggtggtggaaggagaagaacatcctgtcgccgtccaag
acgaaggaggacatggacattgagctggagaggagactggaggagaagaaagcgaaacgg
caaaaaaaactgaacctgggaggaggcggcagtgatcacatgattactggaggaccactg
gcatggcaacagttccgagcgctcatcatcaagaggttccatcacacgagacggagtcgc
aagggattcctctcacagatcatccttcccgccgtcttcgtgtgtctggctctcgtcttt
acaatgatcgttcctccgttcgccgattacccggagctcgagctgcagccctggatgtac
ccggagcagttcaccttctacagcgatgatgcccccaacgacctgacaacgcagaagctt
gtcgccgcgatcctagacccacccgggctcggcacgcggtgcatgataggatacagcatt
ccgaaccttccatgccaacctcggatgcccgtgtgggagactcctcaggcatctcaagct
gccgtagatgccctaaatgagggcaactggacattcgaggacccctccccgagctgccgg
tgcagcactccggagcggctcaccatgctgcctgattgcccgccaggagccggaggacta
ccacccccacaggcaagacgaggtttagccgagtcttcagctaaactaccaaaattaaat
aaagttggagacagcgcttcagcgaggtcacgaggtgcagtgcaccatgggtgccgcggc
gtcttgctcaacaagagtcggtgcgcgacagggagcatgatacccgcggttgtggtctct
ttcaccgtttcccctccctctcagatgctgcaaagcaccacggacacccttcagaacctg
accgggagaaatattagtgactatctcgtaaagtcctacgctgacttcatagagaagagc
ctaacgaggaaatattgggtcaacgagccgaggtacggaggcttctcgctaggccagaag
aacgagcagagagacgtgaacgccacggcactgaggaggctgttccagcaggcagggggg
ttcctcaacatcacagccggcccagcaatagaggaagcctcacttaacctagagggcttc
atccaggcccttgggcccacagacaacgttaaggtttggttcaacaacaagggctggcat
gccatcgtcgccttcatcaacgtcgcgagcaacgcggtgctgcgagcgcggctgcccgag
ggtaaagacccgcgtcggttcggcatcacggcctacaaccacccgctaaacctcaccaag
cagcagctcaccgaggtcgccatgctgatgtcgtcggtggacgtgatggtttccatctgc
gtcatcttctccatgtccctcatcccggcgagttttgcggtgttcctcgtccaggagcgg
gcgtccaacgccaagcacctgcagttcgtgagcggtgtcaacgcctacgtttactggctc
gccaacattacctgggacatgtgcaactacattctgccggcgatcatcgtggtggtcatt
ttcctgtccttccagcagaaggcctacgtttccgatcgcaacttgccggccctcatcctc
ctgctgctgctctatgggtggtcgatcacgccgctcatgtacccggcctccttcgtgttc
acggtgcccagcacggcgtacgtggtgctgacgtgcgtcaacttgttcatcggcatcaac
ggcagcatggccacattcatcctggagctcttcaagggcgacgagactctgacccgcgtc
aatgacatcctcaagtccgtgctcctcatcttcccgcacttctgcctgggacgaggactc
atagacatggcgaccaaccaggcactggcagacgcgtctgagcgctttggtgagaaccgc
ttcaaggagccgctgtcatgggacatggtcggcaagaatctgttcgcgatgttcattgag
ggcagcgtcttcatcgtcctcacgctgctcatccagaagaacttctttatccgcccacgg
tcgatgaagctgaatctgcctcccatcacggacgaggatgttgatgttgctgcggagagg
aaacgtgtgatggagggagacacatcaacagacatcctcaccatcaacgaactcacaaag
gtttacaagaagaaaggtgctccggctgtggacaggatgtgcgttggggtgcgaccaggg
gagtgctttggtctgctgggcgtgaatggtgccggcaagacgagcgcgttccgcatgctg
acaggcgacacgcacgcgacggccggggacgcacgcctcgagggctacagcattctgtct
cagctgagttcggttcagagccgcctgggctactgcccccagttcgacgggaccgatgag
ctgctcacgggccgggagcacctccagctttacgctcgcttgcgcggggtgagggaggag
gacctcgagagggtggttgaatgggcggtgtccacgctgggcctcatctacatcgccgat
cgttccgccggctcatacagcggaggcaacaagcgcaagctctccaccgccatcgctctc
atcggcaaccctcccctcgtcttcctggatgaaccgacgacgggcatggaccccaaagct
cggcgcttcctgtggaactgcattctggccatcgtgcaagcgggccggtcggtggtgctc
acatctcacagcatggaggagtgtgaatctctgtgcacacgcatggccatcatggtgagc
ggaacgttcaggtgcctgggcagcgtccagcacatcaagacacgctttggcgaagggcac
actctggtgatacggctcgctgctggcactcctcctgctgctgctgttaccgcggatcct
gctgccgcagatactgccgatgctgcagctgctgaccccgctgccgccgtcgccgccgct
gctgctgctgcaacgcgagtggcggagtatgtgtgcaagcgattcccacgcacggagttg
cgcgagcgccaccaccgcaccatgtacttccacttgccgggcgccatcacgactcacggc
gcgagtggcgcctctgcgggtgccaccgccacggcctccgcgtgcgccactctctccacc
atcttcgcggcgctatcagagaaccagcagcagctgggcatcgccgacttctccgtgtcg
cagaccacgctggaccaggtgtttgtgagctttgccaggcagcagtggaccgacccagtg
gatgaagagacagggatgtga
DBGET
integrated database retrieval system
