Petromyzon marinus (sea lamprey): 116941737
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Entry
116941737 CDS
T09614
Symbol
PUF60
Name
(RefSeq) poly(U)-binding-splicing factor PUF60 isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116941737 (PUF60)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116941737 (PUF60)
Spliceosome [BR:
pmrn03041
]
Complex A
U2 snRNP components
U2 related factors
116941737 (PUF60)
Complex B
116941737 (PUF60)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
UreF
RRM_10
Motif
Other DBs
NCBI-GeneID:
116941737
NCBI-ProteinID:
XP_032808996
UniProt:
A0AAJ7T287
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Position
12:complement(14652125..14681216)
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AA seq
855 aa
AA seq
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MATETMAASGEESSSAEATRQAQPLPQQDSLRVLDPPPLPDTVSAEEDGAAGSEVVTAPG
VPESDSPAQTTTTEEPMEKEAGAEKSPEQPGQNAVEEDGREAGDAAEVAVPSAAMPDADG
AGEEQEPSGEAAADGPAQEPGADADADGEGSPSKPQSLLPLPQAPGLPLTVQQLTKQVPK
ALLPTPKLYENANGTPAPAQPPPPPPPPVKQGLPALTPAQQEALQKAKKYAMEQSIKTVL
VKQTLAHQQQQLSNLQQAASSIFICSGFNRGGESPGLIMAAQRQRALAIMCRVYVGSIYY
ELGEDTIRQAFAPFGPIKSIDMSFDPVTMKHKGFAFVEYDLPEAAQLAMEQMNGITLGGR
SIKVASASPLHGPSSAAAGQVGRPSNIGQAQPIIDQLAEEAKTHNRIYVASVHPDLSDDD
IKSVFEAFGKITMCTLARDPVLGKHKGYGFIEYERYQSAQDAVASMNLFDLGGQYLRVGR
AVTPPNALASMAAMSAAGGLPPAAAVAAAAATAKITAQEAVAGAAYGALSNPAAAALAAA
QGLAQGLAQGLVPPAVTAQSIAQGLMTPAVTAQSLAQGLVSPAAAALGLAQPLGNLPQAV
MAAQAPGLITGVTPLRPQMQLGMGIPQVGLVNPVLSTPPPGAGGSGDMPRGAINMGGINM
GNLGMNIGGLAGMGGPGLGMMNMGGMAGLAAAAAAAATRKEGGAAGAAAAAAAAAAGDGK
EAAPEKTETLSEQEHMTISGSSARHMVMQKLLRKQESRVMVLRNMVGPEDIDDDLEGEVT
EECGKYGAVSRVVIYQERQGEEDDADVIVKIFVEFSETAESERAIQALNGRWFGGRKVSA
EIYEQERFNTSDLSA
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgagacgatggccgcgtcgggcgaggagtcctcgtcggctgaggcgacgcgg
caggctcagccgctcccgcagcaggattcactcagggttctggatcctcctcccctgcct
gacaccgtcagcgccgaggaggatggtgcagccggctccgaggtcgtgacagcgccgggc
gtccccgaaagcgattctcccgcccagacgactacgacggaggagcccatggagaaggag
gctggtgccgagaagtccccggagcaaccgggccagaatgcggtggaggaggacggccgt
gaggccggcgacgccgccgaagttgccgtccccagtgccgccatgccggacgccgacggc
gctggcgaggaacaagagcctagcggcgaggcagcggcagacggccccgcccaggagccc
ggtgccgatgcagacgccgacggcgagggcagcccctctaagccacagtccctgctgccc
ctgccccaggcaccgggcctcccgctgacggtgcagcaactgacaaagcaggtgcccaag
gcgctgctgcccacgcccaagctgtacgagaacgccaacggcacgcccgcgcccgcccag
ccgcctcctcccccgccaccgcctgtcaaacagggcctgcccgctctcacgcctgcccag
caggaggccctgcagaaggccaagaaatacgccatggaacagagcatcaagacagtgctg
gtgaagcagactctggctcaccagcaacagcagctctccaacctgcagcaagctgcctcc
tccatcttcatttgtagcggcttcaatcgcggaggggagagcccagggctcattatggcg
gcacagcggcagcgcgccctggccatcatgtgccgcgtgtacgtgggctccatctactac
gagctgggggaggacacgatccgccaggccttcgctccctttggccccatcaagagtatc
gacatgagcttcgaccccgtcaccatgaagcacaagggctttgcgtttgtggagtacgac
ctccccgaggcggcccagctggcgatggagcagatgaacggcatcacgctcgggggacgg
agcatcaaggtggcctccgcgagcccgctgcacggtccaagctccgccgcagccggtcag
gtggggcggcccagcaatatcgggcaggcacagcctatcatcgaccagctggcggaggag
gccaagacgcacaaccgcatctacgtggcctccgtgcaccccgacctgtcggacgacgac
atcaagagcgtgtttgaggcgtttggcaagatcaccatgtgcacgttggcacgcgacccc
gtgctgggcaagcacaagggttacggcttcatcgagtacgagcgctaccagtcggcccag
gatgccgtggcctccatgaacctgttcgacctgggaggccagtacctgcgcgtgggccgc
gccgtcactccgcccaacgccctcgcctccatggccgccatgtcggccgcgggggggctc
cccccggcagccgcggtcgccgccgccgccgccaccgccaagatcaccgcgcaggaggcg
gtagccggcgcggcgtacggcgccctctcgaacccggcagccgccgccctggcggcggcg
cagggcctggcgcaggggctggcgcaggggctggttccgccagccgtgacggcccagagc
atcgcgcagggcctcatgacgccggccgtgacggcacagagcctggcacaggggctggtg
tcgccagccgccgccgcgctggggctcgcgcagccgctgggcaacctcccacaggccgtg
atggcggcgcaggcgccggggctcattacaggagtgacccctctgaggccgcagatgcag
ctggggatgggcatcccgcaggtggggctggtcaaccccgtgctgtccacgcctccgccg
ggcgccggaggctcgggcgacatgccccgcggcgccatcaacatgggcggcatcaacatg
ggcaacctgggcatgaacatcggcgggctcgcaggcatgggcgggccgggcctgggcatg
atgaacatgggcggcatggccgggctggcggcggcggcggccgctgcggcgacgcgcaag
gaggggggcgccgccggcgccgctgcggccgcggccgccgcggccgcgggcgacgggaag
gaggcagcgcccgaaaagacggagacgctgagcgagcaggagcacatgaccatctcgggc
agcagcgcacgccacatggtcatgcagaagctgctgcgcaagcaggagtcgcgcgtcatg
gtcctgcgcaacatggtcgggcccgaggacatcgacgacgacctggagggcgaggtgacg
gaggagtgcggcaagtacggcgccgtgagccgcgtcgtcatctaccaggagcgccagggc
gaggaggacgacgccgacgtcatcgtcaagatctttgtcgagttctccgagacggcggag
agcgagcgcgccatccaggccctcaacggccgctggttcggcgggcgcaaggtgtcggcc
gagatctacgagcaggagcgcttcaacaccagcgacctgtcggcgtga
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