Petromyzon marinus (sea lamprey): 116941789
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Entry
116941789 CDS
T09614
Name
(RefSeq) transcription factor SOX-4-like
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116941789
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116941789
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116941789
NCBI-ProteinID:
XP_032809052
UniProt:
A0AAJ7T0L4
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All DBs
Position
12:complement(15134593..15140900)
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AA seq
345 aa
AA seq
DB search
MVHRIGVSDAGTHGAADPGGATSPAAAGAGDAAWCRTASGHIKRPMNAFMVWSQIERRKI
MEESPDVHNAEISKRLGRRWKQLKDGEKVPFLREAERLRLKHMADYPDYKYRPRKKAHVN
NNNNNTGGGGAAGASGELGEKAPPAPEAVESDCSANPGGDGADRDAAKKKKRKRKSVAGG
GAGARGPRWRWLGSARRRQAAEDGGARPRRGGRRRRRRRRRPPPAGRPRWGLGERGEGGV
GGAVGASSWGTEGYGAGQGAADGWEAQGGGGLLLQGASSPWGGARCGERDGGGGGGGQSW
DSLSTGSSRCSHFDFPDYCTPEMSELISGDVGDATSTVSNLVFTY
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaccggatcggcgtctcggacgcggggacccacggcgccgcggaccccgggggg
gccacgtccccggcggcggcgggcgccggggacgcggcctggtgccgcacggccagcggg
cacatcaagaggcccatgaacgccttcatggtgtggtcgcagatcgagcggcgcaagatc
atggaggagtctccggacgtgcacaacgcggagatctccaagcggctgggccgccgctgg
aagcagctcaaggacggcgagaaggttcccttcctccgggaggccgagcgcctgcgcctc
aagcacatggccgactacccggactacaagtaccggccacgcaagaaagcccacgtcaac
aacaacaacaacaacaccggcggcggcggcgccgcgggcgccagcggcgagctcggtgag
aaggccccgccagcgccggaggccgtggagagcgactgctccgcgaatcccggcggcgac
ggcgccgaccgcgacgcggccaagaagaagaagcgcaagaggaagagcgtggccggcggc
ggtgccggcgcacgaggcccgcggtggaggtggctcggctccgctcgccggcgccaagcg
gcggaggacggcggcgcccgcccgcgacggggcgggcgccgccgccgtcgccgccgccgc
cggccgccgccggcgggccgcccacgatggggcttgggggagcgtggagaaggaggggtt
gggggtgccgtgggggcgtcctcctggggtacggaggggtacggtgccgggcagggggcg
gccgacggctgggaggcccagggagggggggggctgctgctgcagggcgcctcctctccc
tgggggggcgctcggtgcggggagcgggacggagggggcggcgggggggggcagtcgtgg
gactcgctgagcacgggcagcagccgctgctcacactttgactttcccgactactgcacc
ccggagatgagcgaactcatatcaggcgacgtgggcgatgccacctccaccgtgtccaac
ctcgtcttcacctactga
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