Petromyzon marinus (sea lamprey): 116941797
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Entry
116941797 CDS
T09614
Symbol
TMC3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmrn02000
]
116941797 (TMC3)
03037 Cilium and associated proteins [BR:
pmrn03037
]
116941797 (TMC3)
Transporters [BR:
pmrn02000
]
Other transporters
Pores ion channels [TC:
1
]
116941797 (TMC3)
Cilium and associated proteins [BR:
pmrn03037
]
Other cilia and associated proteins
Stereociliary proteins
116941797 (TMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
TMEM43
MHC2-interact
DUF6524
Motif
Other DBs
NCBI-GeneID:
116941797
NCBI-ProteinID:
XP_032809054
UniProt:
A0AAJ7T1C2
LinkDB
All DBs
Position
1:26473898..26508718
Genome browser
AA seq
1488 aa
AA seq
DB search
MPEARNARMTRAARRQKTVRKKSVSLRLLAAYEDDHDGRGSDDDGGLGDTQAEWSDQEEI
MQNIQIQKDIIANIRCRPWPMKQKLKVLKQARQIVEKYEGRLTKTRGYQAAGVALFRKFQ
RCLYNFISLFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTVMTVAFLVLPELLA
GEPFGTTKSKRIPSDQMNTAQDLDTIWSLGGYLQYSVLFYGYYGNDRKLGRSGYRLPLAY
FLVGMAVFAYSFVALLRKMAKNSRQSLSSASDENFTFCWKVFCAWDYLIGNQETAESKVA
AIATTIRESILEEQEKKKSENRTLRVFLRILANILVLLCLAGSIYIIYFVVDRSQKLEQM
KDELTLWEKNEVSVVVSLITMLAPSAFEIIATLEQYHPRTTLRFQLARVLVLYLGNLYSL
IIALLDKVNIMSAMVNGTEKNAPDRTVRLGGDTPFVIPSHNSTTIAPALTSSSSPSSPGT
AVDLGQLTNSTFDLVTTATTAATTTAAATVAAAATAAVNLTSALVSTFLANLTAITTSSS
FSSSSPSWNNTTPGPHDSVVEGLRGGTEATALNLTVVAARVVAAVVDWANRTSALALSST
GNKPGSNTTTEMSYSSKSSENQCWETYVGQEMLKLSIIDMIFTVASVLLIDFFRGLFVRF
CSDCWCWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPILPTFNVLKLIGLMYLR
SWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFSIVRYRPSSGCGPFSGQEK
IYDIVSDTIKTEFPSWFNSVVSYVTTPVVILPALLLLFMLIYYLQSIARSLKVTNNDLRL
QLQYERTEDKKKVFQMAAARLQEGGERSSPTHESQSRGSSAPSSPTQEMLFIPSAESTPD
MPRSHGHPAPVTGVAAPRPAGPAAGNGGGGGGGGASAGARRGDSTPELAARPRGGHGQAL
ARTPAGRRRAVVGFRREDSISEAAAAVAASAGGGVRPKAVAPMSRGAHPAKASHSTPEMA
RCRTSEAHAVESVRPRPPRSHAHAVPHPERPLEARRPQVVTREPGRRPGAFFRPPPAGME
WLGPGPAGYLMRMPGGMYVSERHGDPYLQETELLLPISRKAQRILGYYPGEPVQRGVRYA
SPRTRVVPRLLPPHLEAKCYRSRHGPPPGAVHAASPREKRRRSTRDFHGAEERPPSRDHH
HHHHHHHQQHQQQQQQPHYYQQPSQQQQQQQHRHRRRMESMRAARFYIGEGNRSRYSDEE
EEYEDEGNPRAGMSRVQTRVFTAETHRAPEGDLLLPDPDDLRWPSPPPPPASPPHPLPPP
PAQPQQQPLQQQQGPPQQHQQQQQQAESGRRSHTSASSRESSRGQRQGGDARSLPPPTAP
AALTAAHPSESDMSNASSSDQQHSGGTDQYLHIHPHPERRSHAAAHASDAAKRARPRVSG
GGEEEAERASVKTSSGGRSDKSQRRAGPSVEETAGAGKKATDLVCSNV
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagcccgcaacgcgcgcatgacccgggcggctcggaggcagaagacggtgagg
aagaagtcggtgagcctgcgtctcctggcagcctacgaggatgatcatgacggcaggggc
tcggatgatgatggcggactcggggacacacaggcggagtggagtgaccaggaggagatc
atgcagaacatccagatccagaaggacatcatcgccaacatccgctgccggccctggcca
atgaagcaaaagctaaaagtgctcaagcaagcccgtcagatcgtggagaagtacgagggc
cgtttgaccaagacgcgtgggtaccaggcggcaggagtggcgctcttccgaaaattccag
cgatgtctctacaacttcatctcgctcttcattccctgggagatgcgcatcaagaagatc
gagagtcacttcggctcgggagtggcgtcgtatttcatcttcctgcgctggctcttcggc
atcaacatcgtcctcaccgtcatgaccgtcgccttcctcgtgctgcccgagctgctggcc
ggagaaccgttcggaaccaccaagagcaagcgcatcccctctgaccagatgaacacggca
caggatctcgacaccatctggtcgctgggaggctatctgcaatactcggtgctcttctat
ggctactacggcaacgaccgcaagctgggccgctccgggtaccgcctgcccctcgcctac
ttcctcgtgggcatggcggtgttcgcgtacagcttcgtggcgctgctgcgcaagatggcg
aagaactcgaggcagagcctgagcagcgcctcggacgagaacttcacgttctgctggaag
gtcttctgcgcctgggactacctcattggcaaccaggagacagcggagagcaaagtggcg
gccatcgccaccaccatccgcgaatcgatcctggaagaacaagaaaagaagaagagtgaa
aacaggaccctgcgcgttttcctccgcatcctcgccaacatcctggtgctgctgtgcctc
gccggtagcatctacatcatctactttgtggtggatcgctcgcagaagctggagcagatg
aaggatgagctcacgctctgggagaagaacgaggtgagcgttgtcgtgtctctcatcacc
atgctggctccctccgccttcgagatcatcgccacgctggaacaataccacccgcgcacc
actctccgcttccagctcgccagggtcttggttctgtacctgggcaatctctacagcctc
atcattgccctcctggacaaggtcaacatcatgagtgccatggtgaacggcacagagaag
aacgcgccggaccggacggtgcgtctcggcggggacactcccttcgtcatcccctcccac
aactccaccacgatcgccccggcgctgacgtcgtcgtcgtcaccatcatcacctggcacg
gcagtcgatctgggccaactcactaattccacctttgacctcgtcaccaccgccacgacc
gccgccaccaccacggcagccgccacggtcgccgccgccgccaccgccgccgtaaacctg
acgtccgcgctggtgtcaaccttccttgccaacctcacggcaatcacgacgtcctcctcc
ttctcctcctcttcaccctcgtggaacaacacgacgcccggaccgcacgatagcgtcgtc
gaaggcctgcgtggcgggacggaggcgacggcgctgaacttgacggtggtggcggcgagg
gtggtggcggcggtggtggactgggccaaccggacgtccgccctggcgctgagctccacc
gggaataagcccggctcgaacacgaccaccgagatgtcgtactcgtccaagtcgtcggaa
aaccagtgctgggagacctacgttgggcaggagatgctcaagctgtcgatcatcgacatg
atcttcacggtggccagcgtgctgctcatcgacttcttccggggcctcttcgttcgcttc
tgcagtgactgttggtgctgggacctcgagagcaagtttcccgagtacggagagtttaag
atcgcagagaacgtcctccacctcgtctacaaccagggcatgatctggatgggcgccttc
ttctctcccattctgcccacgttcaatgtgctcaagctcatcggcctcatgtacctgcgc
agctgggccgtgctcacctgcaacgtgccacaccagcaggtgttccgcgcctcgcgctcc
aacaacttctacttggccatgctgctcttcatgctcttcctctgcatgctgcccaccatc
ttctccatcgtcagataccgcccgtcgagtggatgcggccccttcagcggccaggaaaag
atctacgacattgtgtcggacacaatcaaaacggagttcccgtcgtggttcaactcggtg
gtgagctacgtgaccacgcccgtggtgatcctgcccgctcttctgctgctcttcatgctg
atttactacctgcagtccatcgccaggtcccttaaggtcacgaacaatgacctgaggctg
cagcttcagtacgagcgtacagaggacaaaaagaaagtgtttcaaatggcagcagcgcga
ctacaggagggcggcgagcgctcctccccgacccacgagtcccagagccgcggctcgtcc
gccccgtcctcgccgacgcaggagatgctcttcatcccctccgcggagtccaccccggac
atgccgcgctcgcacggccacccggcgcccgtgacgggggtcgcggcgccgcggcccgcg
ggccccgccgccggaaacggaggtggcggaggcggcggcggcgcgtccgcgggcgcccgt
cgcggagactcgacgcccgagctggcggcgcgccctcgcggggggcacgggcaggcgctc
gcgagaacgccggcgggcaggaggcgggcggtggtggggttccggcgggaggactcgata
tcggaggcggcggccgcggtggcggcgagcgccggtggcggcgtgaggccgaaagccgtt
gccccgatgtcgcggggagcgcaccccgcgaaggccagccactccacgcccgagatggcg
agatgtaggacgagcgaagcgcacgcagtggagagcgtgaggccacggccacccaggtcc
cacgcgcacgcggttccgcacccagagcggccgctggaggccaggaggccgcaggtggtg
acgcgagagcccggtcgacgccccggagccttcttcaggccaccacctgcgggcatggag
tggctcggtccgggccccgccgggtacttgatgcgcatgccgggcggcatgtacgtgtcc
gagcgacacggtgacccctacctgcaggagaccgagctcctgctgcccatcagccgcaag
gcacagaggattctgggatactacccgggcgagccagtgcagaggggagtccggtacgcc
tcgcccagaacccgcgtcgtgccacgcctgctgcccccgcacctggaggccaagtgctac
cgctcacgccacggccccccgccgggcgccgtgcatgccgcgtctcctcgtgagaagcgg
cgccgctccacccgcgacttccacggcgcggaggagcggcctccgtctcgtgaccaccac
caccatcaccaccaccaccaccagcagcaccagcagcagcagcagcagccgcattactac
cagcagccatcacagcagcagcagcagcagcagcacaggcaccgtcgccgcatggaaagc
atgcgcgccgcacgcttctacatcggcgagggaaaccgctcgcgctactcggacgaggag
gaggagtacgaggacgaggggaacccccgagcggggatgtcgcgcgtgcagacgcgggtc
ttcacggcggagacgcaccgcgctcccgagggcgatctcctcctgccggaccccgatgac
ctccgctggccctcgccaccaccgccaccggcatccccgccacatccgctgcctccgccg
ccagcgcaaccgcagcaacaaccgctgcagcagcagcaggggccaccacagcagcaccag
cagcagcagcagcaggcggaatcgggacgccggtctcacacctcggcgtcgagccgcgag
tcttcacgggggcagcgccagggcggggacgctaggtcgctgccaccgccgacggccccg
gccgcgcttaccgccgctcacccgtccgagtcggacatgtccaacgcatcgagcagcgac
cagcagcacagcgggggcacggaccagtacctgcacatccacccgcacccagagcggcgg
tcgcacgcggccgcgcatgcctccgacgccgcgaagagggcgcggccgagggtcagcggc
ggcggggaggaggaggccgagcgggcctccgtgaagacgtccagcggcggacgctccgac
aagagccagaggagggccgggccaagtgtggaggagactgcgggagcggggaagaaagcg
acggacttggtctgctcgaacgtgtga
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integrated database retrieval system
