Petromyzon marinus (sea lamprey): 116941910
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Entry
116941910 CDS
T09614
Name
(RefSeq) cartilage intermediate layer protein 1-like
KO
K24436
cartilage intermediate layer protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
116941910
Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
116941910
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
TSP_1
Ig_3
Ig_2
I-set
TSP1_CFP_C
TSP1_spondin
CarboxypepD_reg
ig
TSP1_ADAMTS
Motif
Other DBs
NCBI-GeneID:
116941910
NCBI-ProteinID:
XP_032809141
UniProt:
A0AAJ7T0M3
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All DBs
Position
13:complement(6845564..6863421)
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AA seq
1271 aa
AA seq
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MGVVGALLLSCACLLATVLGSRMSGPKASQNQAMLVQSKNYPNMLENHGYSEWTSWFNID
HPGGSGDHERLEAIRFYYRTRVCPSPLAIEARTTAWVPAASTGERVHMSPQEGFWCLNHE
QPGQANCSNYHVRFRCPIVDKKWSDWGSWSSCSASCGRAGYQTRSRLCVSTGAIVPQRTQ
CEGKGVQGRLCSKTCPAVHGNWTTWSKWSLCSVSCGNGQQLRQRWCSNPAPKYGGLDCTG
AALQSRLCAKPTCPETVTRRMVSAHKPPAPLPTPANKPACSLACTVGHVNAACDACVCDG
HLLDGAVFGAARTPLAGARVTLLEGLSQRWLAVSDAHGSFRVPDVCPSRGARLAIEHDKH
VPMTAPILWAQGLSTVFSVQLKRAEKPHITKHPEGRMRYEGQGVSLCCKAEGTPTPEKYS
WYHNDTLLDQEVYKHGNLVLKNLKTSQAGEYYCKATNIAGSIKSSPATLYVVEKGNSPCD
PKPEPNLIRLPHDCFQKHTNSFFIDVGNCPKKVCVKELDFDLRCKDSVSHCCGITRMEKR
DIQCNGYTLPTMVAAECGCKKCTQTKMIVRGRAVADDNGEPMRFGQMFIGNIAIGFTGYK
GDFNLQVPPGTERLVVTFVDRFGKFVNSTKVLLFNHKGGTVFHNIKLQRKKPAIPIASTV
TNTISLGEIEGEDPVGQIEIPPNSFYKLNGELYNGTVQASVTFLDPRNITTMSSASSDLN
FVNDNGDVFPLRTYGMFSVDFKAENLQEPLNVGQVKVFLDSAQVKMPQHLKSMKLWSLNP
ETGIWDEESNFLYEKSKRRKREERTFLIGNVEIRERRLFNLDVPENRRCYVKVRVYRSDR
FFHSEQLEGVVVSLINMEPQEGFSANPRAWGRFDSVITGKNGACLPAFCDELVPDAYTAY
VTANIGGEELEAAPSSPKLNPNVIGTAQPYLRKLEYRRTDHDDERFKKTAFKINLAKPNA
NSPEEIDGPIYPFKNLKQCEDAPYNANHFRFYRVEDDKYEFNTVAFNENDLTTWNEDYLS
WWPKPMEFRACFIKLKIKSSATVMIRSRNLGGTHVETIDKLYGIRDIRSVHTNLKENVSS
ACMEFKCSGMLFDENLIDRTLVEISTQGDCRRENINGMLQEYLINHPPHNVNNETHGFKM
YAPLDPLGHNYGIYTVSDQDPKIAKEIALGRCYEGSSDSTSRVMKPDVGVAVTFACRESN
VTRQSLFQRLQTSPAETLAEMGREMRGGLPGRTRLVSSRVQGRGGRRQQPQQARARLVST
RRFLQRNRSAQ
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggtcggggcgctactgctgtcctgcgcatgcctcttggccaccgtactagga
tctcggatgagtggtcccaaggcttctcagaaccaggccatgttagtgcagagcaaaaac
tatccgaacatgctggagaaccatggctacagcgagtggacctcgtggtttaacattgac
cacccgggtgggagcggcgatcacgagcggctggaggcaatccggttctactaccgcacg
cgcgtctgcccatctccactggctatcgaggcgcgcaccacggcgtgggtgccagctgcc
agcacgggcgagagggtgcacatgagtcctcaagagggcttctggtgtctcaaccacgaa
cagcccggccaagcgaattgctccaattaccacgtgcgcttccgctgcccaatcgtggac
aagaagtggtccgactggggctcctggagctcgtgcagcgcaagctgcggtcgcgccggc
taccagacgcgcagccggctctgcgtctctacgggagccatcgttccgcagaggacgcag
tgcgagggcaagggcgtgcagggtcgcctgtgctccaagacatgcccagccgttcacgga
aattggacgacctggagcaagtggtcgctgtgcagcgtgtcgtgcgggaatgggcaacag
ctgcgccagcgatggtgctccaaccccgcacccaagtacggggggctggactgcacgggg
gccgccctgcaaagccgcttgtgtgccaaacctacctgtccagaaacggtcacaaggaga
atggtgtctgctcacaagccaccagcacctctgccaactccagcgaataagccggcatgc
agtctggcctgcaccgtggggcacgtgaacgcggcgtgcgacgcgtgcgtgtgcgacggt
cacctcctggacggagccgtgttcggcgcagcccgcaccccgcttgccggggctcgggtc
acactgctggagggtctctctcagaggtggctcgccgtgtcggatgcccacggatctttc
cgcgtgccggatgtgtgcccgagccgaggggcacgcctcgcgatcgagcacgacaagcac
gtgccgatgacggcgccaatcctctgggcccaagggctgtcgaccgtcttcagcgtgcag
ctgaagcgcgcggaaaaaccacacatcaccaaacacccagagggcagaatgcgctacgaa
ggacaaggcgtgagtttgtgctgtaaagcggagggaacgccaacgccagaaaaatactcg
tggtatcacaatgacactctgctagaccaggaggtgtataagcatggcaacctcgtgctg
aaaaatctaaagacgtcgcaagcaggagaatactattgcaaggcaacaaacattgctggc
tccataaaatcttcaccagctaccctatatgtcgtggaaaagggtaattccccatgtgac
ccaaagcctgagccaaacttgataaggcttccacacgactgcttccagaaacacacaaac
tcgtttttcatcgacgtggggaattgtcccaagaaggtgtgcgtcaaggaactcgacttc
gacctgcgctgcaaggacagcgtcagccactgctgcggcatcaccaggatggagaagcgg
gacatccagtgcaatggctacacgctgcccaccatggtggcggccgagtgcggctgtaag
aagtgcacgcagaccaagatgattgtgcgcgggagggctgtggctgacgacaacggggag
ccgatgaggttcggccagatgttcatcggcaacattgccatcgggttcaccggctacaaa
ggcgacttcaacctgcaggtgcctccgggcacggagaggctcgtggtgacctttgtggac
aggtttgggaagtttgtgaacagcaccaaggtcctgctcttcaaccacaagggaggaacg
gtcttccacaacatcaagttgcagagaaagaagcccgccattcccatcgcttccactgtc
accaacacgattagcctgggtgagatagagggggaggatccagttgggcaaatcgaaatt
ccgcccaactcattctacaagttgaatggggagctgtacaacggcactgtgcaggccagc
gtcactttcctggatccacgaaacatcacgacgatgtcgtctgcctcgagcgacttgaat
tttgtaaatgacaatggcgatgtgtttcccttgcgtacatatggcatgttttctgttgac
tttaaggcggaaaatttgcaggagcctctgaacgtcggacaggttaaggtttttctcgac
tcggcacaggttaaaatgccacagcatctgaaatcaatgaaactgtggtctttaaatcca
gagaccgggatctgggatgaagaaagcaacttcctgtacgaaaaatccaaaaggcgaaag
agggaagagcgcacatttctcataggaaacgtggaaattagagaacgccggttgtttaac
ctcgatgttccggaaaatcgcaggtgttatgttaaggtgcgtgtttacagaagtgacaga
ttctttcacagcgagcagcttgagggtgtagtggtcagcctgattaatatggagccgcag
gaagggttttccgcaaacccacgcgcgtggggaagatttgacagtgtcatcacaggtaaa
aacggtgcttgtttgccagccttctgtgatgagctggtcccggatgcctacactgcctac
gtgacagccaacattgggggagaagaactggaggcagctccgtccagccccaaactgaat
cccaatgttattggcacggctcagccatacctaagaaagcttgagtaccgacgtactgac
cacgatgacgaaaggttcaagaagaccgctttcaagattaacttagcaaaaccaaatgcg
aactccccagaagaaattgatgggccaatctatccttttaaaaacctcaaacagtgtgaa
gatgccccttacaatgctaatcatttcagattttatagggtggaagatgacaagtatgag
tttaataccgttgcattcaacgaaaacgacttgacaacctggaacgaagattacctgtcc
tggtggccgaaaccaatggaatttcgtgcctgcttcatcaaactgaaaatcaagagctcc
gcgaccgtgatgatacgttcccgaaaccttgggggcactcacgtggagacaatcgacaaa
ctctacggcattcgcgacatccgcagcgtccacaccaacctcaaggagaacgtgtcttcg
gcatgcatggagttcaagtgcagcggcatgctctttgacgagaatctcattgatcgcacg
ctggtggagatttcgacgcaaggcgactgccgccgggagaacataaacggcatgctccag
gagtatctgatcaaccacccaccgcacaatgtcaacaacgagacgcacggcttcaaaatg
tacgcgcctctggatccgttgggacacaactacggcatttacacggtctcggatcaggac
cccaaaatcgccaaagaaatcgccctcggccggtgctacgagggctcgtcggacagcacg
tcccgcgtcatgaagcccgacgtgggagtggcggtgacgttcgcgtgccgcgagagcaac
gtgacgcgacagagcctcttccagcgcctgcagacgtcgccggccgagaccctcgccgag
atggggcgcgagatgcgcggcggcctccccgggagaacccggttggtgtccagccgagtt
cagggccgcggtggccggaggcagcagccgcagcaggccagggcccgactcgtgagcacg
cggagattcctgcagaggaatcggtccgctcagtga
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