Petromyzon marinus (sea lamprey): 116941938
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Entry
116941938 CDS
T09614
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 6-like
KO
K08621
a disintegrin and metalloproteinase with thrombospondin motifs 6 [EC:3.4.24.-]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmrn01002
]
116941938
Peptidases and inhibitors [BR:
pmrn01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
116941938
BRITE hierarchy
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
Reprolysin
TSP_1
Pep_M12B_propep
ADAMTS_CR_2
Reprolysin_5
ADAMTS_CR_3
TSP1_spondin
Reprolysin_2
Reprolysin_3
PLAC
Reprolysin_4
TSP1_CCN
Peptidase_M57
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
116941938
NCBI-ProteinID:
XP_032809228
EnsemblRapid:
ENSPMAG00000042515
LinkDB
All DBs
Position
1:666375..731890
Genome browser
AA seq
1165 aa
AA seq
DB search
MSPPIMGLWAGALTWIAFTTAGMAVSARYAKYSYTSQADFLRNVDHYETTIPQRVDHNGA
PVPPPERIDGRVRPRRSVDGLRTGDGHGDAAQVYYRLAAYGRQLHLNLSLNAALVSRAFS
VEYWGRRGLDWRHNYVSDCHYTGHLQGRQGTTRVALSNCNGLHGVIVADGEEFFIEPLRN
ATATSGPSSTSSPSSRRGRRGRAGGVEEADEEEEEERPHLVFKRSAVRLHRKHGEEEAAC
GVGAKSWTGGSGRRKGAKAPARQRGAWWWRPPPPPASASAPPLWGAQRGRRSVSVERTVE
TLVVADKLMVGFHGRRDIEDYLLTIMNIVAKLFHDSSLGNAVSIMVTRLILLTEEQPNLE
LSHHADKSLDSFCRWQKGMNTRAAQGDSLPDNGLAHHDNAVLMTRYDICTYKNKPCGTLG
LAPVSGMCEPERSCSINEDLGLASAFTIAHEMGHNFGMNHDGTGNACGTRGGREAAKIMA
AQLTSATSPFSWSSCSRDYITSFLDSGRASCLDNSPPKRDFVYPTSLPGRRHDADEQCRF
QYGPSSRQCKYGEVCRELWCISRSNRCITNSIPAAEGTQCQTDSVTKGWCYQGECVPLGT
APERVDGAWGLWSPWGDCSRSCGGGVSSSFRHCDNPVPAHGGKYCLGERKRYRSCNVEDC
PEGSQDFREKQCSDFDSVPFRGKYYTWKPYSGAQVKPCALSCLADGYHFYTERAPAVVDG
TRCHGDPDSLDICVNGECRHVGCDRRLGSSAVEDKCRVCGGDGSACDTVHGTFNDSFPWN
AYHEVTRIPAGAVHILIREVAVSRNYIALKSESEYFLNGAWTIDWPRRFQAGGTVFTYRR
EADEPESVEGLGPTSEPLVVMVLLQEQNKGVEYSYNVPASRPGRVDSAAFSWHLTPWSPC
SATCAGGLQQREAACRRVDDASTVQGSHCDADARPHEPQRPCSTEPCPPEWLIGEWSECS
RTCDGGARTRTVACVRAVGPAEQEALDAARCLTHRPADREPCANRTCPPRWAAQEWSECA
PRCGPGYKHRVVQCKSSDLSRVLAPSQCTEGSKPAARMRCSLAKCPPPRWVPGDWGPCSA
QCGVGQQKRSVTCVSHSGHPSAECPEALRPPPMQQCEVKCDGGPVNTSEECKDVNKVAYC
PLVLKFKFCGRAYFRQMCCKTCQGY
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctccgataatgggactttgggcgggcgcactcacatggattgcattcacgaca
gctgggatggcggtgtcggctcgctatgctaagtattcctacacgtctcaagctgatttc
ctgcggaatgtggatcactacgagacgacgataccacagagggtcgaccacaacggagcg
ccggtccctccgcccgagaggatcgacggccgggtccggcccaggaggagcgtggacggg
ctgcggacaggcgacgggcacggcgacgcggcgcaggtctactaccggctcgccgcctac
gggcggcagctgcacctgaacctgagcctgaacgcggcgctcgtgtcgcgggccttctcc
gtcgagtactggggccgccgcggcctcgactggcgccacaactacgtctccgactgccac
tacacgggccacctgcagggccgccagggcaccacccgcgtcgcgctcagcaactgcaac
ggcctgcacggggtgatcgtggcggacggggaggagttcttcatcgagccgctgagaaac
gcgaccgccacctccggcccgtcgtccacgtcgtcgccgtcgtcgcggcgagggcggcga
gggcgggcggggggggtggaggaggcggacgaggaggaggaggaggagaggccgcacctc
gtcttcaaacgctcggccgtgcggctccaccgcaagcacggggaggaggaggcggcgtgc
ggcgtaggggcgaagtcctggacgggaggcagcggccggcggaaaggggccaaagctccg
gcacggcagcgcggggcgtggtggtggcgaccgccgccgccaccggcgtcggcgtcggct
ccgccgctgtggggggcccagcgcgggcgccgctcggtgagcgtggagcgcaccgtggag
acgctcgtggtggccgacaagctcatggtgggcttccacgggcgccgggacatcgaggac
tacctgctcaccatcatgaacatcgtcgccaaactcttccacgattccagccttggcaat
gccgtgagcatcatggtcactcggctgatcctcctcacggaagagcagccgaacctggag
ctgagtcaccacgccgacaaatccctggacagcttctgccgctggcagaaggggatgaac
acgcgcgctgcacagggcgactcgctgccggacaacggcctcgcgcaccacgacaacgcc
gtgctcatgacgcggtacgacatctgcacctacaagaacaagccgtgcggcacgctgggc
ctggcgccggtgagcgggatgtgcgagccggagcgcagctgcagcatcaacgaggacctg
ggcctggcgtcggcgttcaccatcgcccacgagatggggcacaatttcgggatgaaccat
gacggcacggggaatgcgtgcggcacgcgcggcggccgcgaggctgccaagatcatggcg
gcgcagctgacgtcggcgacgagccccttctcctggtcatcgtgcagccgcgactacatc
acctccttcctcgactccgggcgcgcgagctgcctggacaactccccgcccaagcgcgac
ttcgtgtacccgacatctctgccgggccggcggcacgacgccgacgagcagtgccgcttc
cagtacggcccgtcgtcgcgacagtgcaagtacggggaagtttgccgagagctctggtgc
atcagccgcagcaaccgctgcatcaccaacagcatcccggcagccgagggcactcagtgc
cagacggacagcgtcaccaaggggtggtgctaccagggggagtgcgtgccgctgggcacc
gcgccggagcgcgtggacggcgcctggggcctctggtccccgtggggggactgcagccgc
agctgcggaggaggagtctcctcctcgttccggcactgcgacaaccccgtcccggctcac
ggagggaagtactgcctgggggagcgcaagcgctatcgctcgtgcaacgtggaggactgc
cccgagggctcgcaggacttccgtgagaagcagtgttccgacttcgacagcgttcccttc
cgggggaagtactacacctggaagccgtactccggagcgcaggtgaagccctgtgcgctc
agctgcctggcggacggataccacttctacacggagcgcgcgcccgccgtggtggacggc
acgcgttgccacggcgaccccgactcgctcgacatctgcgtcaacggggagtgccgccac
gtgggctgcgaccggcgcctgggctccagcgcggtggaggacaagtgccgcgtgtgcggc
ggtgacggcagcgcctgcgacacggtgcacggcaccttcaacgactccttcccctggaac
gcgtaccacgaggtgacgcgcatccccgccggcgccgtgcacatcctcatccgcgaagtc
gccgtgtccagaaactacatcgccctgaaatcggagagcgagtatttcctgaacggagcg
tggaccatcgactggccgcggcgcttccaggccggcgggacggtgttcacgtaccggcgc
gaggccgacgagccggagagcgtggaggggctggggccaaccagcgagccactcgtcgtc
atggttctcctgcaggagcagaacaagggggtcgagtacagctacaacgttccggcgagc
cgtcccggccgtgtcgactccgcggccttcagctggcacctcacgccgtggtcgccctgc
tcagccacctgcgccgggggcctgcagcagcgcgaggcggcgtgccggcgcgtggacgac
gccagcacggtgcaggggagccactgcgacgccgacgccaggccccacgagccgcagcgg
ccgtgcagcaccgagccctgcccccccgagtggctgatcggcgagtggtccgagtgcagc
cgcacgtgcgacggcggcgctcgcacgcgcaccgtggcgtgcgtgcgcgccgtggggccc
gccgagcaggaggcgctcgacgccgcgcgctgcctcacccaccgtccggccgaccgcgag
ccgtgcgccaaccgcacctgcccgccccgatgggcggcgcaggagtggtccgagtgcgcg
ccgcgctgcggcccggggtacaagcaccgcgtggttcagtgcaagagcagcgacctgagc
cgcgtgctggcgccgtcgcagtgcaccgagggcagcaaacccgccgcccgcatgcgttgc
tcgctcgcaaagtgcccgccgccacgctgggtgcccggtgactggggcccgtgctcggcg
cagtgcggcgttggacagcagaagcgcagcgtgacgtgcgtgtcgcactcgggccacccg
tcggccgagtgccccgaggccctgcggccgccccccatgcagcagtgcgaggtcaagtgc
gatggggggcccgtcaacacctccgaggaatgcaaggacgtcaacaaggttgcctactgc
cccctcgtgctcaagttcaagttctgcggcagggcctacttccggcagatgtgctgcaag
acctgccaagggtactga
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