Petromyzon marinus (sea lamprey): 116941942
Help
Entry
116941942 CDS
T09614
Symbol
FAN1
Name
(RefSeq) fanconi-associated nuclease 1 isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116941942 (FAN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116941942 (FAN1)
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
116941942 (FAN1)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
116941942 (FAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
FliS
BsuBI_PstI_RE
SSI
DAO
Motif
Other DBs
NCBI-GeneID:
116941942
NCBI-ProteinID:
XP_032809241
UniProt:
A0AAJ7WT67
LinkDB
All DBs
Position
13:8153933..8171770
Genome browser
AA seq
1082 aa
AA seq
DB search
MPNRGKKRKAAGTSSQAGSILAFFRPRSPPKQLCQALGSEQSPNSGGNGGESTGQVTKRA
RNDNHAVARSPNHPRHEDDELQDPNLESCRFETHKKPGTAERGNGSVQETPTVPLAAKPH
MSPYFKRTEAGHEREESQGAAHRRNLSSKLSRTFLRSGSSSKIGVCIRLFDGDGDVDAGK
WTGETEVEPGGQPSGSQKENVKVTVSCHREQSLGSGKKSDPEDACIDLTASDRECKRLKQ
SSKLRRSTRKTINYFKETLPPKGKEVTARGSLAIIPGKDASEPDELREPLQNSETKQVSG
REEAGSAAKIMQVTNNKGIADDCKLERAPSLRKRPSATAPLGTEASRVSRESGPGVTNLP
KDTNGNKANRTSNERRSRPSAEKAAHTWGEEEPEEGELGEDDSEDDGVSADVGDGRPDLY
LENFLTVLRTVMRHEHDRVLFNNEDMAIIGKFHSLSEAAQTLYVRLFQRKVRWLPTVTLK
YTRIAADLTAALDELISSELLQSESELTDVSEALSVLPAPELRLVARSFHVPVAGGVHRQ
QLVEALARLAHQRSVLSLMGARGTDANPAVLRRARERLGCCVRVRRALRAVFSRAMLLFS
PAESPDEEDAASGGQGSLLTVLMVGMARLRFPAYTVRRQTHIFPSRDALLRYEAASHSLS
EMDQAMSSNKLEDACSLYRTARAIWDEMKRSLDFSHEEALPLHLRCMSAGWAYTRMMSRG
VEILQRLQLYPEAVEQLHSLLSQQTYCIQRRGSWWDRLALNLQHHLKDTPKAIEAIRRGL
TDPYVRTGQRLALHQRAVRIRESPSCKALRHLLRDLPTVEYDEAPKVTIRGKACPQTGMG
KSVFLREEEEEAMEVEAAGGSRDGVGTTTTTTMVMCSVEELALAHYRSQDFDQGLHGEGA
TFCTLFGLLLWDVIFSDTVPDVFLNPYQGFPLDLYTDGFYENRRELLDERLAQLRGATGA
ELQEIVVAAWTAHEGEACGLVSWERLMTLSQATSLVASLGGRLLAGVCERLAKNLRHNRG
GLPDLVVWSSQTLQCKLVEVKGPNDRLSQKQLLWLHELMQLGAQVEVCHVTAYGARAARL
EN
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacagaggcaagaagcgcaaagccgctggaacttcgtcacaggctggatccata
ctcgccttcttccgaccccgctcgcctcccaagcagttgtgccaggccttgggttctgaa
caaagccccaacagcgggggaaacggtggggaaagcactggacaggtgaccaagcgagcc
aggaatgataaccatgctgtggcaaggtcgccgaatcacccaagacatgaggatgatgag
ttacaggatccgaatttggagtcctgcagatttgagacgcacaagaagcctggaaccgca
gaacgaggcaatggcagcgtgcaggaaacacccacggtgccacttgctgccaagccacac
atgagtccatacttcaagcggacggaggctgggcacgagagagaagagagccaaggagct
gcccataggaggaatctgtcctccaagctgtctcggacattcctgagaagtggaagctcg
tcgaaaataggtgtttgtataaggctgtttgacggtgatggagatgttgatgctggcaaa
tggacgggagagactgaggtggagcctggaggtcagcccagtggatcacagaaagaaaac
gtgaaggtgacagtttcatgccatagggagcaatccctgggatctggaaaaaaaagtgac
cccgaagatgcctgcattgacttgacggcatcggaccgtgaatgcaaaagactgaagcag
tcgtccaaactgagacgtagtacaaggaagacgatcaattacttcaaagaaacactgcct
cctaagggtaaagaagtgactgctcgtggctcgctagctattatacctggaaaagatgcg
tccgagcccgacgagcttagggagccactgcaaaattcagagacaaaacaagtaagtggg
agagaagaggcaggctcggcagccaagattatgcaagtgacaaataacaagggcatcgct
gatgattgcaaattagaacgcgcaccctctttgaggaagcggccttcggcaacagctcct
ttgggtacggaggcatcgcgagtgtctcgtgaaagcgggcccggcgtcacaaacttgccc
aaggacaccaatggcaataaagcaaatcggacatcgaatgaacgtcgatctcggccgtcc
gctgagaaggcagcccacacgtggggagaggaggagcctgaggagggcgagctgggtgag
gatgacagcgaggacgacggtgtgtctgcagacgtgggggatgggcgccccgatttatac
ctcgagaacttcctgacggtgctccgcaccgtgatgagacacgaacacgaccgggtgctc
ttcaacaacgaagacatggccatcatcggcaaattccattccctctcagaagctgcccag
acgttgtacgtgcgtctgttccagaggaaggtgcgctggctgcccacggttacactgaag
tacacgcgcatcgcggccgaccttacggctgccctggacgagctgataagctcggagctc
ctgcagtccgaatctgagctgacggacgtaagtgaagctctgtccgtgctgccggcacct
gagttgaggttggtggcgcggtcctttcacgttcccgtcgccggtggcgtccacagacag
cagctggtggaggcattagcacgactcgcacaccagcgctccgtcctcagcctcatgggt
gcacgtggcacggacgccaacccggccgttctgcgcagggcccgcgagcggctgggctgc
tgtgtgcgtgtgcgccgggccctgcgggccgtgttctcgcgcgcgatgctcctcttctcg
ccggccgagtccccggacgaggaagacgcggcgagtggcggccagggctcgcttctcacc
gtgctcatggtcggcatggcgcgtctgcgcttcccggcgtacaccgtgcgccgccagacc
cacatcttccccagccgcgacgccctcctcaggtatgaggccgcctcgcatagcctcagt
gagatggatcaagcgatgagcagcaacaaactggaggatgcgtgcagcctgtaccgcacc
gcccgtgccatctgggacgagatgaaacggagcttggatttcagtcacgaggaggcgctg
cccttgcacctgcgctgcatgtcggccggctgggcctacacacgcatgatgtcacgtggg
gtggagatcctgcagcgactgcagctctacccggaggcggtagagcagctgcactcgctg
ttgtcgcagcagacgtactgcattcagcgccgtggatcctggtgggaccgcctggcactg
aacctgcagcaccacctcaaagacacgccaaaagccattgaggccatccggcgggggctg
acggacccgtacgtgcgcacgggacagaggctcgcgctgcaccagcgcgccgtgcgtatt
cgcgaatccccgagctgcaaggctctgcgccacctactgcgggaccttcccaccgtcgag
tacgacgaggcgcccaaagtgacgatccgtggcaaggcctgtccccagacgggcatgggc
aagtcggtgttcttgcgggaggaagaggaagaagccatggaggtggaggctgcgggtggg
agcagagacggagtgggcaccaccaccaccaccaccatggtcatgtgctctgtggaggaa
ctggccctcgcccactaccgctcacaggactttgatcaagggctgcacggcgagggtgcc
acgttctgcacactgtttggcctgctgctgtgggacgtcattttctcggacactgtccct
gacgtattcctcaacccctaccagggcttcccactggacttgtacacggacggcttttac
gagaaccggcgcgagctgctggacgagcggctggcacagctacgcggggcgacgggcgca
gagctgcaggagatcgtggtggcggcgtggacggcccacgagggagaggcgtgcggcctc
gtttcgtgggagcgcctcatgaccctcagccaggccacgagcctcgtggcgagcctgggc
gggcgtctcctggctggtgtttgtgagcgtcttgccaagaacctgcgacacaaccgtggt
ggcctcccagacctggtggtgtggagcagccagaccctgcagtgcaagctggtggaggtg
aaggggcccaatgatcggttgtcccagaagcagctcctgtggctgcatgagctcatgcag
ctgggcgcacaggtggaagtgtgccatgtcaccgcatatggagccagggctgccagactg
gaaaactaa
DBGET
integrated database retrieval system
