Petromyzon marinus (sea lamprey): 116941969
Help
Entry
116941969 CDS
T09614
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116941969 (TOPORS)
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116941969 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmrn03037
]
116941969 (TOPORS)
Enzymes [BR:
pmrn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116941969 (TOPORS)
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116941969 (TOPORS)
UBL E3 ligases
116941969 (TOPORS)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
116941969 (TOPORS)
Cilium and associated proteins [BR:
pmrn03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116941969 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-ANAPC11
RING_XB3-XBAT31
zf-RING_4
zf-C3HC4_4
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
116941969
NCBI-ProteinID:
XP_032809297
UniProt:
A0AAJ7T389
LinkDB
All DBs
Position
1:1841557..1854549
Genome browser
AA seq
860 aa
AA seq
DB search
MHQASVRRPAEMEARDSVEETDSSSPDAGRRRNSCNSSSPDSKCAICLDRMDNRALASSC
MHSFCFLCILEWAKNKADCPLCKQPFRSIIYNVRSNSSFDEYWLTPEENGSFSSPDGRRF
RYRSTLTHERLRAERREESGVLFEAASRRQPPSRVDAHIQRMLQQLRERRRARLNNRSLR
CLKEEEVMAFRRALYRRGVRVRRVEDGGRHRTVSPDFFLQNPATLHRLVPWLKRELTVLF
GRRESIVSFVLHRILENITRFHLESDAFLQDLKPTLQYRTEHFLHEFASFARSPFNMEAY
DERAFYDAVVPGDGDGAESSESSVIAISPDPADDPPSVRTLCLLKSPSSLPSPPGLSEWD
DETPGPSYASREEAVPDGSPETPERRCWSRRGVAGTYASATPSSSARSRESDEDGNVTPF
VAVTAAASQEVLPDVKMQKPCPPPDSGDSDLDDCVIVGYVKPLAERTPELVMLSSDSGDD
EEAAAPGTSGMDDPGGAAAAVAKEAPTSRPLDRKYPPAPPSISLCETEVDRDSDRTQWLS
DSSVSSRRRTTTTRSRRRRRRSAEKPKCGTSSRSDAAQPREVSSRRENSRSGSREPRSSR
RSKQKHRQSREVSVDIFEDWDRNVSHSRKSRDEDDRRDWDRSRGYRDRSRSRDKAHGRLY
GSDWSSDSERSVGRGRFSEQGRSRNQRERSRDRHRDKTHKRGQESSWASERHRGHRASAA
RERSWSDERTRAREDRAAEDHRHHGGRSEKPGGKRKCKTHHIEHAYYLSYSSGAREHREP
ASASHSPERYRGHYRNAPSQALELAPGPSHHKACAVPHGRVKRSRSSSVEIVFEGKLTID
AEHFRKSRRKRKKSKHKRRH
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaagcgagcgtcaggcggcccgcagaaatggaggcgagagactcggtggaggaa
acagactcgtcctccccggatgccggccggcggaggaattcttgcaactcctcctcgccc
gactccaagtgcgccatctgcctggaccgcatggacaaccgcgccctggcaagctcctgc
atgcacagcttctgcttcctgtgcatcctcgagtgggccaagaacaaggcggactgcccg
ctgtgcaagcagcccttccgctccatcatctacaacgtgaggagcaactcgagcttcgac
gagtactggctcacgcccgaggagaacggctcgttctcgagccccgacggccggcgcttc
cgctaccgctcgacgctcacgcacgagcgcctgcgcgccgagcggcgggaggagtcgggg
gtcctcttcgaggcggcgtcgcggcgccagccgccctcgcgtgtcgacgcgcacatccag
cggatgctgcagcagctgcgcgagcgccggcgtgcccgcctcaacaaccgcagcctgcgc
tgcctcaaggaggaggaggtgatggcgttccgcagggcgttgtaccggcggggcgtgcgg
gtgcggcgcgtggaagacggcgggcgccaccgcaccgtcagccccgacttcttcctgcag
aacccggcgacgctgcaccgcctggtgccgtggctcaagcgcgagctgacggtgttgttc
gggcgcagggagtcgatcgtgagcttcgtgctccaccgcatcctggagaacatcacgcgc
ttccacctggagagcgacgccttcctgcaggacctgaagcccacgctgcaataccgcacg
gagcacttcctccacgagttcgccagcttcgcccgctcgcccttcaacatggaggcgtac
gacgagcgcgccttctacgacgcggtcgtgccgggcgacggcgacggcgccgagagcagc
gagtcttccgtcatcgccatctcgccagaccccgcggacgatccgccgagcgtgcgcacg
ctgtgcctcctcaagtccccctcgtcgctgccgtctcccccggggctctccgagtgggac
gacgagaccccggggccgtcctacgcgagccgggaggaggcggttccggacggcagcccg
gaaaccccggaacggaggtgctggagcaggcgcggcgtcgcggggacgtacgcctcggcg
acgcccagctcgtccgcgcgcagcagggagagcgacgaggatggaaacgtcacccccttc
gtcgccgtcaccgccgcggcctcccaagaggtcctccccgatgtgaagatgcagaagccg
tgcccgccaccagacagcggcgacagcgacttggacgactgcgtgattgtcggctacgtg
aagcccctggccgagcggacgcccgagctcgtcatgctgtcgtccgactccggcgacgat
gaggaggccgccgcccccggcacgtccgggatggacgatcccggcggcgccgccgccgct
gttgcaaaggaagcgccgacgtcgcgccctctggaccgcaaatatccgccggcgccgcct
tccatttctctgtgcgaaaccgaggtggacagggacagcgacaggacgcagtggctctcg
gacagctccgtcagcagccgtcggaggacgacgacgacgaggagcaggaggaggaggagg
cggtcggcggagaagcccaagtgcgggacgtcgagcaggagcgacgcggcgcaacccagg
gaggtctcttcccggagagagaactcccgtagcgggagcagggagccgaggtcgtccagg
aggagcaaacagaaacacaggcagtcgagagaggtgagcgttgacatctttgaggactgg
gacaggaacgtatctcactcccggaagtcgagagacgaggacgatcgccgggattgggat
cgatccaggggatacagggatagatcccgcagcagagataaagcgcacggcaggttgtac
ggcagcgactggtcgagtgacagcgagcgatcggtgggcagaggcaggttcagcgagcag
gggaggagcaggaatcagagggaaaggtctcgggaccgccacagggataagacgcacaag
agaggccaggagagctcctgggcgagcgagaggcacaggggccacagggcttcggcggcc
agggagaggtcgtggagcgacgagaggacccgcgctcgggaagacagggcggccgaggat
catcgccaccacggcgggcggtcggagaagccgggcgggaagaggaagtgcaagacgcac
cacatcgagcacgcgtactacctgtcctactcgagcggcgcccgcgagcacagggagccg
gcgtccgccagccactcgccggagcgctaccggggccactaccgcaacgccccctcccag
gcgctggagctggcgccgggcccgtcgcaccacaaagcgtgcgccgtgccgcacggccgc
gtcaagcgcagccgcagctccagcgtggagatcgtgttcgaggggaagttgaccatcgac
gccgagcacttccgcaagtcgcggaggaagaggaagaagtcgaagcacaagcgaaggcac
tag
DBGET
integrated database retrieval system
