Petromyzon marinus (sea lamprey): 116941981
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Entry
116941981 CDS
T09614
Name
(RefSeq) transducin-like enhancer protein 4 isoform X1
KO
K04497
groucho
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04310
Wnt signaling pathway
pmrn04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116941981
04330 Notch signaling pathway
116941981
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmrn04812
]
116941981
Cytoskeleton proteins [BR:
pmrn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
116941981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TLE_N
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
WD40_RFWD3
HALZ
Motif
Other DBs
NCBI-GeneID:
116941981
NCBI-ProteinID:
XP_032809319
UniProt:
A0AAJ7T1B6
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All DBs
Position
13:9535821..9559677
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AA seq
797 aa
AA seq
DB search
MYPQSRHAAPPQAGQPFKFAINETCDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHY
VMYYEMSYGLNIEMHKQMEIVKRLNAICAQIIPFLSPEVSMDQNASLLTASWWEHQQQVI
QAVERAKQVTMSELNAIIGVRALPNLPLQQQLQAQHLAHAHAPPVPLPPHPSGLQPPGLP
PVSVGSSGLLALSGALAPPPHIPSKEDKNHHQDNNNNHRADRDPGPSKSVSPAGSLRSNE
KFRNSSDFANENKKRKMDVKESMNHYDSDADKSDDNLVVDVSNEDPTSPRGSPGHLPREN
GLDRSHGHGPRKEAPPQSPASVASSSSTPSSRSKDHAQNEKPHTPMSASSTPASSNDLPV
PGTSGSASLRPIPGKPHSMDPLGAGFRMPLAAAGGPFGNPFGMIPHPGLNGELASPGAYA
SLHGMSPQMSAMAAAAAAYGRSPMVGFDPHSHMRVPGVPPSLPNSISGGKPAYSFHVSAD
GQMQPVPFPPDALMGPGIPRHARQISTLPHGEVVCAVTISNPTRHVYTGGKGCVKIWDIG
QPGTKTPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTISIWDLAAPTPRIKAELTSS
APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISHDGTKLWT
GGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHHSKPDKYQ
LHLHESCVLSLKFAHCGKWFVSTGKDYLLNAWRTPYGASIFQSKETSSVLSCDISVDDKY
IVTGSGDKKATLYEVIY
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtatccgcagagcagacacgctgcgccaccccaagccgggcagcccttcaaatttgcc
atcaatgagacttgtgaccgcatcaaggaagagtttcagtttttacaggcgcagtatcac
agtttgaagttggaatgtgagaaactggccagtgagaaaacagagatgcagcggcattat
gtcatgtattatgaaatgtcatatggcctgaacatcgaaatgcacaaacaaatggagata
gtgaaaaggctcaatgcaatctgtgcccagatcattccgtttctgtcaccggaggtgagt
atggaccaaaatgcctccctgctgactgcaagttggtgggagcaccaacagcaggtgatc
caggctgtagagagagctaagcaggtgaccatgtcggagctcaacgctatcatcggggta
cgtgcccttcccaacctgccgctgcaacagcagctgcaggcgcagcacctggcgcacgcg
cacgcaccgcccgtgccgctgcccccgcacccatccgggctgcagccgcccggcctcccg
ccggtgagcgtgggcagctcgggcctcctggccctgtcgggggccctggcgccacctccg
cacatccccagcaaggaggacaagaaccaccaccaggacaacaacaacaaccacagagca
gaccgggacccaggcccaagtaagtccgtgtcaccagctggcagcttgagaagcaatgaa
aaattcagaaattcgtccgactttgcaaatgagaacaaaaagaggaagatggatgtgaag
gagtctatgaatcactacgacagcgacgctgacaagagtgatgacaacctagtcgtggat
gtctcaaatgaggaccccacgtccccccggggcagcccgggccacctgccccgagagaac
gggctcgatcggtcacacggtcacggcccccggaaggaggcgcccccgcagagtccagcg
tcggtggcgtcgtccagcagcactccgtcctctcgctccaaggaccacgcacagaacgag
aaacctcacaccccaatgtccgcctcaagtaccccagcctcctcaaatgacctccctgtg
cctggcacgagcggctcggccagccttaggcccatcccaggaaagcctcacagcatggac
cctctgggggccggcttcaggatgcctttggctgcggccggcgggccgtttggcaacccc
tttgggatgattccacaccctgggctgaacggagagctggccagccccggggcgtacgcc
agcctgcacggcatgtccccgcagatgagcgccatggcggccgcggccgccgcctacgga
cgctcgcccatggttggctttgatccacattcgcacatgcgcgtgcccggcgttcccccg
tctctgcccaacagtatttctggtggaaagccggcgtactcgttccacgtgagcgcggac
gggcagatgcagcccgtgccgttccctccggacgccctgatgggcccagggatcccgcgt
cacgcgcggcagatcagcacgctgccgcacggcgaggtggtgtgcgccgtcaccatcagc
aaccccacgcgccacgtctacacggggggcaagggctgcgtcaagatctgggacatcggg
cagccgggaaccaagacgcccgtttcccagctcgactgcctcaatcgggacaattacatc
cggtcgtgcaagctgctgccggacgggcgcacgctgatcgtgggcggcgaggcgagcacc
atctccatctgggacctggcggctccgaccccgcgcatcaaggcggagctcacgtcgtcg
gcgcccgcgtgctacgcgctcgccatcagtcccgactccaaggtgtgcttctcctgctgc
agcgacggcaacatcgccgtgtgggacctgcacaaccagacgctcgtcaggcagttccag
ggacacacggacggcgcgagctgcatcgacatttcccacgatggcacgaagctgtggacg
ggaggcctggacaacaccgtgaggtcgtgggacctgcgggagggcaggcagctgcagcag
cacgacttcacctcgcagatcttctcgctgggctactgcccgacgggggagtggctggcc
gtgggcatggagagcagcaacgtggaggtgctgcaccacagcaagcccgacaagtaccag
ctgcacctgcacgagagctgcgtcctctcgctcaagttcgcccactgcggcaaatggttt
gtgagcaccggtaaagattacctgctgaatgcctggagaacaccctacggggcaagcata
ttccagtccaaggagacatcgtccgttctgagctgtgacatctcggtggatgacaagtac
atagtcactggttccggggacaagaaggctaccctgtacgaagtcatttattga
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