Petromyzon marinus (sea lamprey): 116942073
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Entry
116942073 CDS
T09614
Name
(RefSeq) growth arrest-specific protein 1-like
KO
K06232
growth arrest-specific 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116942073
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Gene cluster
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Motif
Pfam:
GDNF
CDC45
Zn_ribbon_bTOP1
Motif
Other DBs
NCBI-GeneID:
116942073
NCBI-ProteinID:
XP_032809522
UniProt:
A0AAJ7T3N4
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Position
13:13805315..13808363
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AA seq
511 aa
AA seq
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MNTSRLRPGTGSDSGCGSALGSELRSEENATMSSSYPRHPQHQPHHPQRLLHHPQHQHQH
QPHHPQHQPHHPQHLLHHPQHQPHHPQHQPHHPQNQPHHPQHQLHHPQRQLHHPQHQPHH
PRHHHPSCSALLLPVSPLLHHHHHHHILLLPLLLLPLLLQQALPVRGTQQVLLRPAQAAR
GGAMQCWEAEIRCLQETECKRAYNQYLRACEAALRPAVSGDVADEADGGGGGGGGGGGFS
TVTHCPSHCIHAIIQLNATRGGPGLESCDCADDFVCLAAKRGIEPCLPRTYTGGGGGGGG
EDEYDDDDEYGGGGAGRGRGGAGAGGALGCTEARRRCEVEPACSAAMDAYLMNCGKLLNG
VRCTRECMRVILHMMAMPRALALSECVCDGLERPFCEVVKDNMERLCFDRERGSGHFSDE
DDDDDDDDEGDDEDDDGDDDDDDGGYGDNAAAYGVGRHARQKASGSADGTHSVRVFPRGQ
PRAGGQCRPLASVGLTAAACLAASAARRLSG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctcgcggttgcggcccgggacaggctccgactccggctgcggatcggctttg
ggatcggagttgaggtcggaggagaacgcgacgatgtcgtcatcgtatccccgtcatccc
cagcaccaaccccatcatccccagcgcctactccatcatccacagcaccagcaccagcac
caaccccatcatccccagcaccaaccccatcatccccagcacctgctccaccatccccag
caccaaccccatcatccccagcaccaaccccatcatccccagaaccaaccccatcatccc
cagcaccaactccatcatccccagcgccaactccatcatccccagcaccaaccccatcat
ccccggcaccaccacccctcttgctctgcgctgctgctacccgtgtcaccgctcttgcac
caccaccatcaccaccacatcctgctgctgccgctgctgctgctgccgttgcttctgcag
caggcgctgcccgttcgcgggacacagcaggtactgctgcggccagcgcaggcagcgcgc
ggtggagccatgcaatgctgggaggctgagatccgttgcctgcaagagacggagtgcaag
cgggcgtacaaccagtacctacgggcgtgcgaggcggcgctgcgccctgccgtcagcggg
gacgttgcggacgaagcggatggtggtggtggcggcggcggtggtggtggtggattttcc
accgtcacgcactgccccagccactgcatccacgccatcatccaactgaacgcgactcgg
ggaggacccggcctggaaagttgcgactgcgcggacgacttcgtgtgcctcgccgccaaa
cgaggaatcgagccgtgcctgcctcgcacctacacgggcggcggcggcggcggtggcggc
gaggacgaatacgacgacgacgacgaatacggcggaggtggtgcaggtcgcggaagaggt
ggcgctggcgctggcggtgctctgggctgcacggaggcgaggcggcggtgcgaggtggag
ccggcgtgcagcgcggcgatggacgcctacctcatgaactgcggcaagctgctgaacggg
gtgcgctgcacgcgcgagtgcatgcgcgtcatcctgcacatgatggccatgcccagggcg
ctggcgctcagcgagtgcgtgtgcgacggcctcgagaggccgttctgcgaggtggtcaag
gacaacatggagcggctgtgcttcgaccgcgagcgagggagcggccacttttccgacgag
gacgacgacgacgacgacgacgatgagggtgacgatgaggatgacgacggtgacgacgat
gacgacgacggtggctatggggacaacgctgccgcgtacggcgtcggaaggcacgcgcgc
cagaaagcgtccgggagcgcggatggcacccactcggtcagagtgttccccaggggtcag
ccccgcgccggtggacagtgccgacccctggctagcgtcgggctcacggccgccgcgtgt
ctcgccgcgagcgcggcgcggcgcttgtcggggtga
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