Petromyzon marinus (sea lamprey): 116942089
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Entry
116942089 CDS
T09614
Symbol
SPATA5L1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmrn03009
]
116942089 (SPATA5L1)
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
116942089 (SPATA5L1)
Ribosome biogenesis [BR:
pmrn03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
116942089 (SPATA5L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_22
TIP49
AAA_28
AAA_33
AAA_2
bpMoxR
RNA_helicase
AAA_3
NTPase_1
AAA_17
TsaE
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
116942089
NCBI-ProteinID:
XP_032809549
UniProt:
A0AAJ7T2A4
LinkDB
All DBs
Position
13:14682514..14691342
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AA seq
936 aa
AA seq
DB search
MESPLGARGAAGLSFTGPSSLCLHPAELSDSSSQRCRLGPGALRALGVRLLGAPLRLSLG
RDAVGEERLLLCAAWPRPDLAEGHVEVDARCGSLAALLEADPDDDNGGGEAGGVGGRDPA
LPARIPLHRIRALPRVRAKRLFVTAVCAAPEPGGVGGGGEPAAAAAATSALPRAAELRDV
ARELLRGALVFPGCALRVAGHGHPLLYVLVRRAQAEAQRGGKGGEESRPADGEGEEEEGP
PGDETTVKREEPETACSVAMLVHGRTEIFVTRVSPVRRFLSALRAKQRRQRSRLVGFPLG
GLDAEAERLRELLLLPARFPRALRRLCLWGPPGGLLLAGPPGVGKTRLVRAVADEVGAEM
VAINASDVVGPRPGDTEAALRAAFARALALATPPAQDGGGGGDEDDDDDGGAGTPCILFI
DEVESLCPRRGEGGAVDTRVVAQLLTLMDGARGERGGPGTGTVLVVAATNRPEALDPALR
RPGRFDRELVLGVPTERQRIAILAVLTRGMPLAPGVGLQELAALTPAHAGADLAELCRHA
AVGALRRLPRAKPPGVPGRDGGPNGRAAGGERAAAAAAAANPVELADERREGREEADGAE
GEDPQRSDELTRRALPAVRVEMSDFRSALPLVRPTATRCDAAVPAVESGGAGGWERIVGL
DDVKRRLLQCVEWPLLHPAALLRLGARLPRGALLYGPPGCAKTSLVRAVAARASVSFLSV
SGAQVMSPYVGDTERNLAQVFRRARAAAPCLLFLDEVDALLGSRGRAAGVAQRALATLLC
EMDGVGVDAGERRGGGGVDGEEEELSNEHVLVVAATNRPEVLDEALVRPGRLDSVIFVPP
PDAKTRLAILQLQLALVPLAEDVSLTELADATHMYTGADLKGVCSEAALLAMADEGVDVE
RVRQEHFLRALRLIPPSLTAQQVARYEALYARHVLA
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggagtccccgcttggggcgcgtggagccgcgggcctctcattcacggggccctcgtct
ctgtgcctccaccccgcggagctcagcgactcgagcagtcagcgctgccgcctgggcccc
ggggcgctgcgagcgctcggggtccgcctgctgggcgcgcccctgcgcctctcgctgggc
cgagacgcggtcggggaggagcggctgctgctgtgcgccgcgtggccgcggcccgaccta
gcagagggccacgttgaggtggacgcgcgctgcgggagcctcgccgcgttgctcgaggca
gaccccgatgacgacaacggcggcggagaggccgggggggtgggaggacgcgacccagcg
ctacccgcgcggattccccttcaccggatccgcgcgctcccgcgagtccgcgccaagcgc
ctcttcgtcacggccgtgtgcgctgctcccgagcccgggggtgtcggcggcggcggcgag
cccgcggccgccgccgccgccacctccgcgttgcccagggcggccgagctgcgcgatgtg
gcgcgggagctgctgcggggagcgctcgtgttcccgggctgcgcgctgcgcgtcgcgggc
cacggccaccccctgctctacgtgctcgtgcggcgagcccaagccgaggcccagcggggc
ggcaaggggggcgaggagagcaggccggctgatggggagggggaggaggaggagggaccc
cccggggatgagacgacggtgaaaagagaggagccggagaccgcgtgctccgtggccatg
ctcgtgcatggtcgcaccgagattttcgtgacgcgcgtctctcccgtgcgccgcttcctc
tcggcgctgcgggccaagcagaggaggcagcggagccgcctcgtcggcttccccctgggc
ggcctggacgccgaggcggagaggctgcgggagttgctgctgctgcccgcgaggttcccg
cgcgcgctgcggcgtctgtgcctgtggggccccccgggaggactcctgctggcggggccg
cccggcgtgggcaagacgcggctggtgcgcgccgtggcggacgaggtcggggccgaaatg
gtggcgatcaacgcctcggacgtcgtgggaccgcggcccggagacaccgaggccgcgctg
cgcgccgccttcgcgcgagccctggcgctggcgacgcctcccgcccaggacggtggtggt
ggtggtgatgaggatgatgatgatgatggaggtgccgggacgccgtgcattctcttcatt
gacgaggtggagtccctgtgcccacggcgcggggagggaggcgcggtggacacgcgcgtg
gtggcgcagctgctgaccctgatggacggggcccgcggcgagcgagggggccccgggacc
gggaccgtgctcgtggtggccgccaccaaccggccagaggccctggacccggcactgagg
aggcccgggcgatttgaccgcgagctggtgcttggcgtgcccacggagcggcagcgcatc
gccatcctcgcggtgctcacgcggggcatgccgctggcgccgggcgtgggcctccaggag
ctcgcggccctcacgccggcgcacgcgggcgccgacctcgccgagctgtgccgccacgcg
gccgtcggcgcgctgagacggctcccgcgggcgaagccgccgggggtgcccgggcgcgac
ggggggccgaacgggcgagctgcgggcggagagcgcgcggcggcggcggcggcggcggcg
aacccggtggagctggcggacgagcggagagagggacgggaggaggcggatggagcggag
ggggaggatccgcagcggagcgacgagctgacccggcgggcgctgccggccgtgcgcgtg
gagatgagcgactttcgcagcgcgctgcccttggtgcggccgaccgccacgcggtgcgac
gccgccgtgccggccgtggagagcggtggggccggaggctgggagcgcatcgtggggctg
gatgacgtcaagcgccgcctgctgcagtgcgtggagtggcccttgctgcaccctgcggcg
ctgctgcgtctgggcgcccgcctgccgcgaggcgcacttctctacgggccgcctggctgc
gcaaagacctcgttggtgcgggcggtggcggcgcgcgccagcgtctcctttctcagcgtg
tcaggcgcccaggtgatgtcgccatacgtgggcgacaccgagagaaacctcgcgcaggtg
ttccgtcgtgcgcgggctgccgccccgtgcctgctcttcctggacgaggtggatgcgctg
ttggggtcgcggggtcgcgccgccggggtggcgcagcgcgccctcgccacgctactctgc
gagatggacggcgtcggggtcgacgccggcgaaaggagggggggcgggggagtggacggc
gaggaggaggagctgtcgaacgagcacgtgctggtcgtcgcggcgaccaatcggcccgag
gtgctggacgaggcgctggtgcgtccgggccggctggacagcgtcatctttgttccgccg
cccgacgcgaagacgcgtctcgccatcctgcagctgcaactggcgctggtccccttggcg
gaggacgtctccctgacggagctcgccgacgcgacccacatgtacacgggcgccgacctc
aagggggtgtgcagcgaggcggcgctgctggccatggcggacgagggtgtggacgtggag
cgcgtgcggcaggagcacttcctgcgtgccctgcggctcatcccgccctcgctcacggcg
cagcaggtcgcgcgctacgaggcgctctacgctcggcacgtgctggcatga
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