Petromyzon marinus (sea lamprey): 116942116
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Entry
116942116 CDS
T09614
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 8-like
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04137
Mitophagy - animal
pmrn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116942116
04137 Mitophagy - animal
116942116
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmrn01002
]
116942116
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116942116
04121 Ubiquitin system [BR:
pmrn04121
]
116942116
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116942116
Peptidases and inhibitors [BR:
pmrn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116942116
Membrane trafficking [BR:
pmrn04131
]
Endosome - Lysosome transport
Others
Others
116942116
Ubiquitin system [BR:
pmrn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116942116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
UCH_1
Rhodanese
Motif
Other DBs
NCBI-GeneID:
116942116
NCBI-ProteinID:
XP_032809597
UniProt:
A0AAJ7T3T6
LinkDB
All DBs
Position
13:15365270..15387937
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AA seq
1077 aa
AA seq
DB search
MPVLTEFSNKKPLHVCTSLGELNNLAQVKMEKTKSPRRYAQSASKVLKQAEVYGLERDEE
NAYMLYMRFLHIVDHLRKTPEFVRDKGFFLSLLGSDNFSKAVREAERLSESLKNRYEEAE
VRQRLEERERAAGEDAAFRDEGVGDDDYDDEDDDDFNRRHGPLGNGAATGGTRLPETRKR
TSGSPGSRSQPGAEVAPTESNSHTGPCRTSITPQQLYSMLSDGDVQLVLMDARPSIDYAA
SHIMSVRCISVPEEAINPGTTVAQIEVGLPQESLSLWGDRGRVDYVLLLDWRSRPEDVLL
GTTLHSLRDAIYKWDSMTILRSQPLVLEGGYENWLLHYPMWCSEPHVHVPARPGPPSTQP
DLLELNYPSLEEPPPPPTPAPPPAPPPSVRDVGSYTLVAGVRPEPEQSGGGATASAAAGA
PGGSLDAVPSGRPTAAAKSIPQVDRSKKPSVAAAGPSPVSAAAAVPGPEWLSAREREKIA
RDAAGIKEKARVEKEKRMKAEEVKKRRAAEEEEKRKWAEEEKRKAEERQKLEDEERARKD
HVERTRRARLEKEEKERDKGGAVPSPAIGSARESPPPHAPDVRAERLRQQQEEAENRQRE
EAERVSRIREKAEQDQRGRMQDGRMGPSRHTPDSHADVHPTQPGPTARTAATQGGERDRP
RLQRSFSSPNVAQLGMGIDEEDERTLVDGGLRPKPQFDRASKPVPVAAVRAQSSAILPMR
HLNPTYGGMGRALTGLRNLGNTCYMNSVVQCLSNTTSLAEYFLTSQYVNNINRNNPLGRK
GQVVEEFAVIVRALWSGQYRSITPRDFKFMIGRLNDQFCGTEQHDSQELLIFLLDGLHED
LNQAKRVRVKEEKTEHLSDSMAAQLAWDAYKHINESILVTLFHGQFRSTIKCLTCQKVSR
TFEVFMNLTLHLPSDTTSKCTLQDCLQMFSKPEKMTDANRYLCSHCKQRRESVKTMEIWK
LPPVLIIHLKRFSYSGRWKQKLQTNVGFPLTSLDMKPYIINKDNRYSEYNLYAVSNHYGS
LDGGHYTAYTHNTVRDSWFKFDDHEVEFIYPKNVSTSAGYILFYSALPQQPPRMDIF
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcctcaccgagttctctaacaagaagccgctgcacgtgtgcacctctctgggc
gaactcaacaacctggcccaggtgaagatggagaagaccaagtccccgcgacgctacgcg
cagtcggcaagtaaagtgctaaagcaagcggaggtgtacgggctggagcgcgacgaggag
aacgcctacatgctctacatgcgcttcctgcatatcgtagaccacctgcgcaagacgcca
gagttcgtacgggacaaggggttcttcctgtctctgctggggagcgacaactttagcaag
gctgtgagagaggcagagcggctctccgagagcctcaaaaacagatatgaggaggccgag
gttcggcagcggttggaggagcgagagcgagcggccggggaagacgccgctttccgggat
gaaggcgtcggagacgacgactatgacgacgaggatgacgacgactttaatcggaggcac
ggccccctgggcaatggcgctgccacgggcggcacgcggctcccggagaccaggaaacgc
acgtcggggtcgcctggctctcggtctcagccgggcgcagaggttgcgccgacagaatcg
aactcccacaccggcccctgccgcaccagcatcacgccgcagcagctctattctatgctc
agcgacggtgatgtccagctggtgctgatggacgcacggccctccatcgactacgcggcc
tcccacatcatgtcggtccgctgcatcagcgtaccggaggaggccatcaacccggggacc
acagtggcgcagatagaggtgggcctgccccaggagtcgctgtcgctgtggggcgaccgg
ggcagggtagactacgtgctgctcctggactggaggagccgcccggaggacgttttgctg
ggaacgacgctgcacagcctacgcgacgccatctacaagtgggacagcatgacgatcctg
cgcagccagccgctggtgctggagggcggctacgagaactggctgctgcactaccccatg
tggtgcagtgagccacatgtgcatgtgccagccaggccggggccacccagcacccagcct
gatctcttggaactcaactacccctcgctggaggagcccccacctcccccgaccccggcc
cctccccctgcccctcccccctccgtgcgggacgtggggtcctacactctcgtcgcgggt
gtccgaccggagcccgagcagagtggtggtggcgccactgcctccgccgcggcaggtgcc
ccagggggctcgctggatgccgtgccctcgggccgtcccaccgctgcagccaagagcatt
cctcaggtggaccgctccaagaagccgtcggtggcggccgcggggcccagcccggtgtcc
gcagccgcggcagtgcccggcccggagtggctgtctgcgcgcgagcgcgagaagattgcg
cgcgacgccgcaggaatcaaggagaaggcgcgcgtggagaaggagaagaggatgaaggcc
gaggaggtgaagaaaaggagggcagcggaagaggaagagaagaggaagtgggcagaggag
gaaaagaggaaggcggaggagaggcagaagttggaggacgaggaaagggcgaggaaagac
cacgtggagagaacacggagagcacgtttagagaaggaggaaaaagagagagacaagggt
ggagctgtgccctcccctgccatcgggtctgccagagagagccctccacctcacgcgccg
gacgtgcgagcagaacggctgcgccaacagcaggaggaagcggagaatcgacagcgcgag
gaagccgagcgggtctccaggattcgcgagaaggcggagcaggatcagcgtggcaggatg
caggacggccgcatgggaccgtcgcggcacaccccggacagtcatgctgacgtccacccg
acccagccgggccctacggcccgcaccgccgcgacccaggggggcgagcgggaccggccg
cgcctgcagcgctcgttctcttcgcccaatgttgcccagctggggatgggcattgacgag
gaggacgagcggacattggtggacggggggcttcgccccaagccacagttcgaccgcgcc
agcaagccagtgcctgtggcggcggtgcgggcgcagtcctcggcgattctgccgatgcgc
cacctcaacccgacatacggtggaatgggccgcgcgcttacgggtctacgcaacctgggc
aacacatgctacatgaactcggtggtgcagtgcctgagcaacaccacgtcgctcgcagag
tacttcctcacttcgcagtatgtcaacaatatcaacaggaacaacccccttggccgcaag
ggccaggtggtggaggagtttgcagttattgtgcgcgcactctggtcgggccagtaccgc
tccatcaccccccgcgacttcaagttcatgattggccgcctcaacgatcaattctgtggc
acggagcaacacgactcgcaggagctgctcatctttctgctcgacggcctgcacgaggac
ctcaatcaggcaaagcgtgtgcgcgtgaaggaggagaagacggagcacctgtccgactca
atggcggcacagctcgcgtgggacgcgtacaagcatatcaacgagtccatccttgtcacc
ctcttccacgggcagttccgctccaccatcaagtgtctcacctgccagaaggtgtcgcgc
accttcgaggtcttcatgaacctgacactgcacctgccttctgacaccacctccaagtgc
acgctgcaggactgcctgcagatgttctccaaacccgagaagatgacagatgccaaccgc
tacctgtgcagccactgcaagcagcggcgcgagtctgtcaagacgatggagatctggaag
ctgccacccgtgctaatcatccatctaaagcgattttcctactcgggccgctggaagcaa
aagttgcagacgaacgtgggcttcccgctcacgtcgctggacatgaagccgtacatcatc
aacaaagataatcgatactccgagtacaacctgtacgccgtatcgaatcactacggctct
ctggatggcggccactacacggcgtacacgcacaacacggtccgcgacagctggttcaag
ttcgatgaccacgaggtggagttcatctaccccaagaacgtgtcgacctccgcaggatac
atccttttctactcagccctcccacaacaacccccccgcatggacatattctag
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