Petromyzon marinus (sea lamprey): 116942169
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Entry
116942169 CDS
T09614
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116942169
Membrane trafficking [BR:
pmrn04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
116942169
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_9
Ig_2
V-set
C2-set_3
LRR_RPS2
LRRNT
Motif
Other DBs
NCBI-GeneID:
116942169
NCBI-ProteinID:
XP_032809675
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Position
13:complement(318812..355976)
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AA seq
636 aa
AA seq
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MGLDPAPGHGAAHGAKVQTEMLGHRRRVLHKPLGCSQALLAVVVIILPSLESHAMGCPAR
CECTALQKSVVCHRRRMVAIPEGIPTETKSLDLSKNRLRSLDPDDFSNFLLLEELEVNEN
VIANIEPGAFNNLPFLRSLSLRNNRLKLIPRGVFSRLTNLTHLDISENKIVILLDYMFQD
LRNLKRLEVGDNELVYVSHHAFKGLQSLEQLTLEKCNLTSLPTEALSHLGSLSTLRLRHL
NIASILPFSFRRLLRLKVLELSHWPMLEELPMNSLYALNLTALSITFTNITTIPQSALQP
LVNLRLLNLSYNQIRVVEAGAFQNLIRLQELHVAVSRLTTIKPQAFIGLSKLRVLNVSKN
LLQSLEESAFQSTSSLQVLGLDSNPLACDCRLLWVVRRRRRLALGERQPSCESPEHVKGM
AFGDFPEEMSPYYFSCKKPWITVQKPQQVATAESQTVLLPCQAEGDPQPSIMWVSPWKQK
ITAQSNGRMAVLPDGTLQIRYAQILDSGTYVCVASNAAGNDTNTGILDVKSFSPQSLYNN
DTLAYVGNGMNGTGSNATRARDQQLYDVKTILVAIAIGCFTFLGVVVLCLFILFLWSRGR
GRHKPSVHVEYTSRRTESTDSGAQAPNPRQISMRMV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgggcctggatccggccccagggcacggggcagcgcacggcgctaaggttcagactgaa
atgctcggacacagaagaagggtgcttcacaagcccctgggctgttctcaggcactcttg
gcggtcgtcgtcatcatcctgccttccctggagagccacgccatgggctgcccagcgcgc
tgcgagtgcactgcgcttcagaagtccgtggtgtgccatcggcggagaatggtggccatc
cccgaaggcatacccacagaaaccaaatcgctggacctcagcaaaaaccggctacgttcc
ctggaccctgacgacttctcgaactttctgctgctggaggagctggaggtgaatgaaaat
gtgatcgcaaatatcgagccaggagccttcaacaacctgcccttcctccgctctttaagc
ctgaggaataaccgcctgaagctcatccctcgcggcgtgttctccaggctcaccaacctg
acgcacttagacatcagtgaaaacaagatcgtcatcctgctggattacatgttccaggat
ctgcgcaatctcaagcggctggaggtaggagacaacgaactggtttatgtctctcaccac
gccttcaaggggctacagagcctggagcagctcactttggaaaagtgcaacctaacgagt
ctccccacggaggcgctgtctcacctgggcagcctgtccacgctcaggctacgccacctc
aacatcgcgagcatcttgcccttctcattcaggcggctcctccgactgaaggtgcttgaa
ctaagccactggccaatgctcgaggagcttcctatgaacagtctatatgcattgaacttg
acggcgctatcaattaccttcacaaatatcaccaccatcccacaatcagcattgcagcct
ctggttaatctcaggctattaaacctatcgtacaatcaaatcagagtagtagaagctggt
gcctttcagaatttaattcgacttcaggaattgcatgtggctgtgtcgaggctcaccaca
atcaagccccaggcctttataggcctcagcaaattaagagttttaaacgtgtcaaaaaac
ctgctgcagtccctggaggagagtgctttccagtcgacgagtagtctgcaggtcctcggt
ttggactcaaaccccctggcatgcgattgtcgcctgctgtgggtcgtgcgcaggcggaga
cgcttggccctgggcgagcggcagccgtcgtgcgaatctcccgagcacgtcaagggcatg
gcgtttggagacttccccgaggagatgtcaccgtattacttctcgtgcaagaagccctgg
atcacggtgcagaagccccagcaggtcgccacggccgagagccagacggtgctgctgccg
tgccaggcagagggggacccccagccctccatcatgtgggtctcgccatggaagcaaaag
atcacggctcagtctaacggccgcatggccgtgctgccagacggcacgctgcaaattcgc
tacgcgcagatcctggacagcggtacttacgtgtgcgtagccagcaacgccgcgggcaac
gacaccaacacgggcatcctcgacgtcaagagcttttctccacagtctttgtacaacaac
gacaccctcgcgtacgtcggcaacgggatgaacggcaccggctctaacgccactcgggca
agggaccagcagctctacgacgtcaaaaccatcctagtggccatagccatcggctgcttc
acgtttctgggcgtcgtggtgctctgcttgttcattctgtttctttggagcaggggaagg
ggcagacacaaacccagcgtccacgttgagtacacctcccggcgcaccgagagcaccgac
tcgggcgctcaggcgccaaaccccagacagatcagcatgaggatggtatag
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