KEGG   Petromyzon marinus (sea lamprey): 116942178
Entry
116942178         CDS       T09614                                 
Symbol
XPA
Name
(RefSeq) DNA repair protein complementing XP-A cells isoform X1
  KO
K10847  DNA-repair protein complementing XP-A cells
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    116942178 (XPA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmrn03400]
    116942178 (XPA)
DNA repair and recombination proteins [BR:pmrn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     116942178 (XPA)
SSDB
Motif
Pfam: XPA_C XPA_N CpG_bind_C
Other DBs
NCBI-GeneID: 116942178
NCBI-ProteinID: XP_032809690
UniProt: A0AAJ7WTS8
LinkDB
Position
13:complement(568587..602621)
AA seq 317 aa
MGEELSEKLGEELSEELGEELGEELSEEMGEELSEQQQQEGEGCSGVAGPGQSTEEPAAA
LPAAVRAQIERNRQRALLLRQARAASQPYPSASARSQAGAARLRVPGRAVDTGGGFLLEE
ADDEEEAAARRVVHTPAPVMKADYLQCGECGRRFMDSYLSATFDLAVCDACRDNEGKHQL
VSRTEAKTEFLLKDCDLDGREPALRFVLRKNPHNPRWGDMKLYLRLQVEGRSLDVWGGEE
ALQEAREQRHHGRDRRQQKRFNNKVKELRMAVRSSLYRKASAGHVHEYGPEQRDDADADA
YHRTCVQCGHRLAYEKM
NT seq 954 nt   +upstreamnt  +downstreamnt
atgggcgaggagctgagtgagaagctgggtgaggagctgagtgaggagctgggtgaggag
ctgggtgaggagctgagtgaggagatgggcgaggagctgagcgagcagcagcagcaggag
ggggaaggctgttcaggggtggcagggcctgggcagagcacggaggagccggcggcagcg
ctaccggccgctgtgagagcccagatcgagcgcaaccgtcagcgagcactgctcctccgc
caagcacgcgccgccagccagccctacccctcggccagcgctcgctcacaggcgggcgct
gcgaggctgcgggtgcccggccgggcggtcgacaccggcggtggtttcctgctggaggag
gcggacgatgaggaggaggcggcggctcgccgggtggtgcacacaccagcgcccgtgatg
aaggcggactacctgcagtgcggggagtgcgggcgccgcttcatggactcctacctgagc
gccacgtttgacttggccgtgtgcgacgcgtgcagggacaacgagggcaagcaccagctg
gtgtcgcgcacggaggccaagacggagttcctgctcaaggactgcgacctggacgggcgg
gagccggcgctgcgcttcgtcctgcgcaagaacccgcacaacccgcgctggggagacatg
aagctgtacctgcgcctgcaggtggaggggcgctcgctggacgtgtggggcggcgaggag
gccctgcaggaggcccgcgagcagcggcaccacggccgcgaccggcggcagcagaagcgc
ttcaataacaaggtcaaggagctgcgcatggcggtgaggagcagcctgtaccggaaggcc
agcgcgggccacgtgcacgagtacggccccgagcagcgcgacgacgcggacgcggacgcg
taccacaggacttgcgtgcagtgcggccaccgcctcgcctacgagaagatgtga

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