Petromyzon marinus (sea lamprey): 116942192
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Entry
116942192 CDS
T09614
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04120
Ubiquitin mediated proteolysis
pmrn04144
Endocytosis
pmrn04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116942192
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116942192
09144 Cellular community - eukaryotes
04530 Tight junction
116942192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116942192
04121 Ubiquitin system [BR:
pmrn04121
]
116942192
Enzymes [BR:
pmrn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116942192
Membrane trafficking [BR:
pmrn04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
116942192
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
HECT type E3
116942192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
116942192
NCBI-ProteinID:
XP_032809719
UniProt:
A0AAJ7WTL6
LinkDB
All DBs
Position
13:complement(1154621..1270106)
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AA seq
1473 aa
AA seq
DB search
MADRLRLRFASGRSQTDPTPMAQSNLAGCGEIFTGLFTIPRHCGSVLMTADPPEYSREAD
LSPCSTSEPPHLKRSSSMFIPQLSTTCSEPRRKKSTSMQISLQCRSIDEDGAASPDDVHG
NAPLVADAREEAPPDGARRRVRSCDTKLGRASVNGEHVAAKPHCVPADGFLCGTKQKRIP
PSAILSANGCKPRVERAASTSPSQDQQPNGAYIPQDSGSLRRCSSLLIFPRSPSVTPPPS
PTMSESPSLSPSQQRQQPQQRQQQQQQQIQRHQGSESLPLLPRRVFHLPPFQLPPTLSHI
VEHRQAEMSANDGAASADALAEARSGYVRSKRSPVGGDVHRIRVLPIRCRPKPGDAASTT
SSSSSATLPVQGQARTKPAQQLCHAKERTGSPGKQSSFVVQLQKPSAPERAPPEKELERT
RGGSCGDRYETLDARHATYPRIRFQRSTSACLPCRAPPAGRRFVIEGDEWSGEGTSAVWD
VRRRARGEHEHPNLHRSCSLEGHPGGPAVFRIEQDMRAGSPHLRIRLTRNGEERGACEQT
CRDPFDEMILLSTRNRGKTRDDFLGQVDVPLSHLPTEDPTRERPYTFKDFLLRPRSHKSR
VKGYLRLKMAYLPQNGINEETPEQTEESEQPGWEVLEHPDAAATQRTSEQQLPPLPVDWE
ERQDNLGRTYFVNHRTRSTQWVRPSTVEATPESETHIREIDQQAQNIFRSRRQISEDVEA
TDSRDNSELNWELLEPVAESQPSTAPEPPVPPTPPPAPSPVPSPATSPAPSPAPSPAPSP
APSPAPALAPPPPLLESPEPEPPSAALSDELNRRLEAASVSGEEASSSMLLNGRIRSSSV
TNPEPPQSIMKPQARRIRSSTVTNGELAHFQRVVVPQAFTTPGLPPGWEERKDEKGRSYF
VNHNNRTTTWTRPIVQQADYATQGAATAGAPASEGPSAPIRRPRSLSSPAIQENIPDMRG
GRNGPPSFTQPPLDSPQASPYGSPKQKHKGCPGFSFLPAGWEMRFAPNGRPFFIDHNNRT
TTWEDPRLKVPVHMRMRPSLDPSELGPLPPGWEERTHSDGRTFYIDHNTKNTQWEDPRLQ
NPAITGPAVPYSRDYKQKYDFFRKKLKKPADIPNRFEMKLHRASILEDSYRRIVAVKRAD
LLKARLWIEFDGEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATDNYTLQINPISGLC
NEEHLSYFTFIGRVAGMAVFHGKLLDGFFIRPFYKMMLQKPITLNDMESVDSEYYNSLMW
ILENDPADLDLRFCIDEEMFGQTHLVELKPNGSEILVTNENKKEYIELVIQWRFVERVQK
QINAFMEGFSELIPMDLIKIFDENELELLMCGLGDVDVNDWRQHTIYKNSYCANHPVIQW
FWKAVLLMDGEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEMWSTSEKLPRAHTC
FNRLDLPPYESFDDLREKLNIAIENAQGFEGVD
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccgacttcgtctgcgcttcgcgtctggacgcagccaaacggaccccaccccc
atggcgcagtccaacctcgcaggttgcggtgagattttcacggggttgttcacgattccc
aggcactgcgggagcgtgctgatgacggccgatccgcccgagtattcgcgggaggccgac
ctctccccttgctcgacgtcggagccgccccacctgaagcgaagctcgtccatgttcatt
cctcagctgtccacgacctgcagcgagccgcgacgcaagaagagcacctccatgcagatt
tccctgcagtgccggtcgatcgacgaagacggcgccgcctctccggacgacgtccacggg
aacgctccgctcgtggcggacgctcgagaggaagcgcccccggatggagcgcgccgccgc
gtccggtcctgcgacaccaagctcggccgggcgtccgtgaacggtgaacacgtcgccgcc
aagccgcactgcgtccccgcggacggcttcttgtgcggcaccaaacagaagcgaattccc
ccgagcgccattctcagcgcgaatgggtgcaaaccgcgcgtcgagagggcggccagcacc
tctccctcgcaagaccaacaaccaaacggggcttacattccccaggactctggctccctt
cgcagatgctcgtccttgctcatctttccccggagcccgagcgttacgccgcctcccagc
cccacgatgtcggagtcgccgtcgctgtcaccgtcgcagcagcggcagcaaccgcagcag
cggcaacagcagcagcagcagcagatccagcggcaccagggctcggagagcctgccgttg
ttgccgcgcagggtctttcacctgccgccgtttcagctgcctccgacgctgagccacatc
gtggagcaccggcaggccgaaatgtctgcaaacgatggggcagcttccgccgatgcgctc
gccgaagcgaggagcggttacgtgcggtcgaagcgcagccccgttgggggcgacgtgcac
cgcatccgggtgctgcccatccgctgccggcctaagccgggggacgctgcgtcgacgacc
tcctcctcctcgtcggccacgttacccgtgcagggccaggcgaggaccaaacccgcacag
cagctgtgccacgccaaggagaggaccggtagccccggcaagcagtcgagctttgtcgtg
cagcttcaaaaaccgtcggcgcctgagcgtgccccgccggaaaaggaactcgagcggact
cggggagggagctgcggggatcggtacgagactctggacgccaggcacgcgacgtacccg
cgcattcgctttcagaggagcacgtccgcctgccttccctgccgggctccgcccgcgggc
agaaggttcgtgatcgagggcgacgagtggagcggcgagggcacgagcgcagtgtgggac
gtgaggaggagggcccgcggggagcacgagcaccccaacctccacaggagttgctccctg
gagggccaccccggcggccccgccgtgtttcggattgagcaggacatgcgtgccggctcg
ccgcacctgcgcatccgactgacgcgcaacggggaggagaggggtgcgtgcgagcagacg
tgccgagacccgtttgatgagatgatacttttgtcaacccgaaatcgtggcaagacgaga
gatgacttcctgggccaggtggatgtcccgctcagccacctcccgactgaggaccccacc
agggagagaccgtacaccttcaaggacttcctgttgcggccacggagtcataaatcccgg
gtgaagggctacctgaggctaaagatggcctacttgccccagaatggcataaacgaggag
accccagagcagactgaagaatcggagcagcccggctgggaggtgctggagcacccggac
gccgccgccacccagcgaacgagcgagcagcagctaccgccgctgcccgtcgactgggag
gagaggcaggacaacctgggccgcacgtacttcgtgaaccaccgcacgcgctccacgcaa
tgggtccgccccagcaccgtagaggcgacgccggagtcggagacgcacatccgggagatc
gaccagcaggcgcagaacatcttccgctcgcggcgtcagatcagtgaggacgtggaagcg
accgactcgcgggacaactccgagctgaactgggagctgctggagccggtcgcggaaagc
cagccgagcaccgcaccggagccgcccgtccccccgacgcccccgcccgcgccgtctccg
gtgccctcgccggccacgtcgcctgcaccctcgccggcgccctcgccggcgccctcgccg
gcgccctcgccggcgcctgctttggctcccccacccccgctcttggagagccccgagcca
gagccaccctcagcggcgctgtccgacgagctgaaccggcggctcgaggcggccagcgtg
tccggcgaggaggcctcgtcctcgatgttgctgaacggacgaatacgctcatccagtgtc
actaacccagaaccgccacagtccatcatgaaaccacaggctaggaggatacggtcatcc
accgtgacaaacggtgaacttgctcactttcagagggtggtggtgccgcaggccttcacc
accccggggcttccaccgggctgggaggagaggaaggacgagaaggggcgttcctacttc
gtcaaccacaacaaccgaaccaccacgtggacgaggcccatcgtgcagcaggccgactac
gccacgcagggggctgccacggcgggggccccggcctcggagggtccctctgcgcccatc
cgacgaccccgcagcctcagctcgcccgccatccaggagaacataccggacatgcgaggt
ggccgcaacgggccgccgtcgttcacacagccccccttggactcgccgcaggcgtctccg
tacggctcccccaagcagaagcacaagggctgccctggcttcagcttcctgccggccggc
tgggagatgaggttcgcccccaacggtcgcccattcttcatcgaccacaacaaccgcacg
accacatgggaggacccacgcctcaaagtgcccgtccacatgcggatgagacccagtctg
gacccatcagaactgggccctttgccgcccggctgggaggagcgcacgcactcggacgga
cgaaccttctacatcgaccacaacacgaagaacacgcagtgggaggatccccggctacag
aacccagccatcactggcccggctgtgccctactcaagggattacaaacagaagtacgac
ttcttcaggaagaaattaaagaagccggccgacatccccaaccgcttcgagatgaagctg
caccgcgccagcatcctggaggactcgtaccggcgcatcgtggccgtgaagcgcgccgac
ctgctcaaggcgcgcctgtggatcgagttcgatggcgagaaggggctggactacggcggc
gtcgcccgcgagtggttcttcctcatctccaaggagatgttcaacccctactacggcctc
ttcgagtactcggccacggacaactacactctgcagatcaaccccatctcgggcttgtgc
aacgaggaacacctctcttacttcaccttcatcgggcgtgtggccggcatggcggtgttc
cacggaaagctcctcgacggctttttcatccggcccttctacaagatgatgctccagaag
cccatcacgctcaacgacatggagtcagtggacagcgagtactacaactcgctcatgtgg
atcctggagaacgatcccgcagacctcgacttacgcttttgcatcgacgaggagatgttt
ggccagactcacctggtggagctgaagccaaatggttctgaaattctggtgaccaatgag
aacaaaaaggagtacattgagttggtcatccagtggaggtttgtggaacgagttcagaag
caaataaatgccttcatggagggcttctccgagctcattcccatggacctcatcaagatt
tttgacgaaaatgaactcgagctgctcatgtgcgggctgggcgacgtggacgtcaacgac
tggaggcagcataccatctacaagaacagctactgtgccaaccaccccgtcatccagtgg
ttctggaaggctgtgctgctcatggatggggagaagcgaatccgcctgttgcagtttgtg
acggggacgtctcgagtgcccatgaacggctttgcggagctctacggctccaacggacct
cagctgttcaccattgaaatgtggtcgacttcagaaaagctaccccgagcacacacatgt
tttaaccgcttggacttgccaccatacgagtccttcgatgaccttcgggagaagctgaac
atcgccatcgagaatgcgcagggcttcgagggcgtcgactaa
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integrated database retrieval system
