Petromyzon marinus (sea lamprey): 116942206
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Entry
116942206 CDS
T09614
Name
(RefSeq) unconventional myosin-Va-like isoform X1
KO
K10357
myosin V
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116942206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116942206
04131 Membrane trafficking [BR:
pmrn04131
]
116942206
03029 Mitochondrial biogenesis [BR:
pmrn03029
]
116942206
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmrn04812
]
116942206
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
116942206
mRNA cycle factors
P-body specific factors
116942206
Membrane trafficking [BR:
pmrn04131
]
Others
Actin-binding proteins
Myosins
116942206
Mitochondrial biogenesis [BR:
pmrn03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
116942206
Cytoskeleton proteins [BR:
pmrn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
116942206
BRITE hierarchy
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
nSTAND3
Myosin_N
AAA_22
AAA_16
HTH_17
DUF6040
Motif
Other DBs
NCBI-GeneID:
116942206
NCBI-ProteinID:
XP_032809776
EnsemblRapid:
ENSPMAG00000000443
LinkDB
All DBs
Position
13:2370599..2489765
Genome browser
AA seq
1865 aa
AA seq
DB search
MSATELYCKLTKVWIPHADEVWVSAEICQDYRDGDRLLQLRLEDGRVVQHPLEGGQLPPL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFAESNHIYTYCGIVLVAINPYEQLPIYGED
IIFAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYFAT
VGGSASEANIEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFNRQYLIVGANMRTY
LLEKSRVVFQAEEERNYHVFYQLCASAELPEFKDLHLEPAEAFVYTAQGGNAVIEDVDDG
EDLERTRRAFTLLGIGASYQMGIFKIIAGILHLGNVEVQSQDREQETCFVNKEDKHLNIF
CELLGLERDQMAHWLCHRKISTGAETYVKPMGRTQAQNARDALAKHVYAQLFSWIVHRIN
KALRSSTKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMRE
EIPWTLIDFYDNQPCIDLIEAKLGVLDLLDEECKMPKGSDQSWAQKLYEKHLGRGKHFLK
PRMSNVAFIICHFADKVEYQCDGFLEKNRDTVYEEQINILKASQKFELVAELFQDEGKDG
AGAATTAAPARGRAGSGSRAPPPSHSVRSARPGAKGSSREHKRSVGLQFRNSLHLLMETL
NATTPHYVRCIKPNDDKMAFTFDPKRAVQQLRACGVLETIRLSAAGYPSRWTYQEFFNRY
RVLMRKKDIVSDDKKQTVQNVLEHVIKDPDKFQFGKTKIFFRAGQVAYLEKLRADKLRAA
CIKMQKTIRGWLQRKRYLRMRAAAITIQRHVRGHQARRLAQFMRSTRAAVIIQTAYRMYR
VRRAYAKIRRTAIRMQARARGIFARQRYQQMLYRHKAVVLQKHVRGWLARRLVQRELHAV
VHLQCCVRRMRARRQLKQLRIEARSVEHYKTLHKGMENKVVQLQMKVNEQTRDSRAMQER
LAATEHAHAQEAERLRSELERLRAGADEARSSGTRLAGLADEVQQLRAQLERALAEKSAL
QENASKYQQETEKVVAELMEQTALLKSEKEELNLRIQAKDKEMHDELKARLADETRQLQG
DLDEERSRYQSLVKEFSRLELRHENLREETEMLKATAKPGHRRTGSTQSSNESESAYNSI
MTSDVDTTDLTRHLEEVDTVKAAMDFTIFLKLQKRVRELEQEKRWMQERLDRHEGKGIDG
DSVSDQALPAAKGAADPRTDVEIEYDDLKRSELEAENRRLKSELDELRHSLRDDERATGP
GRAAGCTPYDHVLGHLNAALEELEVRREEVLHLKSQILGGERQKGSMSEASARFAQDLEK
LDDEEEVKRAYMGVREANRRERDLEDEDFVLAYEGLKKTTRLLESQLQAQARRHEAQLES
SRRETALLREENGRLAQSLQLPPDARVEPSLQLEITRLTNENLDLWEKNENQEKTIRKLK
KQLKLLDRKIKDLEAGVMPHAEPAAEEVATRHPAIQRLEKEFQGMLEFHNDDENRLIRNL
VVDLKPNELSQRLLPGLPAYILFMCVRHADYTNDDQKVRSLLTSTINGIKKVLKKRNDDF
EIVCFWLSNTCRLLHCLKQYSGEEGYAQQNTSKQNEHCLKNFDLTEYRQVLSDLAIHIYQ
QLIKIIEVVLQPMIVPGMLEHETIQSVSSVKATGLRKRSSSIANGGSHFTLESILRQLSV
IYDTMCHHGMDPELVKQVVRQVFYQLGSTTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWL
RDRKLQDSGAKETLLPLIEAAQVLQVNKKTEQDAEAICSICTALSPAQITKILNLYTPVN
EFEERVTVSFIRIIQAQLKERPNSTQLLMDAKRMFPVTFPFNPSTLGLDSIEIPGTLSLA
FLNRV
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctacggagctctactgcaagctcaccaaggtatggatcccgcatgcggacgag
gtgtgggtgtcggcggagatctgccaggattaccgcgacggagaccgcctgctgcagctt
aggctcgaagatggcagggtggtgcagcacccgctggagggggggcagctcccgcccctg
agaaaccccgacattctggtgggagagaacgatctgacggcactcagctacttgcatgag
ccggccgtgctgcacaacctcaaagtccgctttgccgagtccaaccacatatacacgtac
tgcggcatcgtgttggtcgccatcaacccttacgagcagctgcccatctacggcgaggat
atcatcttcgcctacagcgggcagaacatgggcgacatggacccgcacatctttgccgtc
gccgaggaggcctacaagcagatggcacgggatgagaagaatcagtcgatcatcgtgagc
ggggagtcgggcgccggcaagacggtatcggccaagtacgcgatgcgatacttcgccacg
gtcgggggctcggccagcgaggccaacatcgaggagaaggtgctggcctccaaccccatc
atggaggccatcggcaacgccaagacgacccgcaacgacaacagcagccgcttcggaaag
tacatcgagatcggcttcaaccggcagtacctcatcgtcggcgccaacatgcgcacgtac
ctcctggagaagtcccgcgtcgtcttccaggcggaggaggagcggaactaccacgtgttc
taccagctctgcgccagcgccgagctgcccgagttcaaggacctccacctggaaccggcg
gaggcgttcgtttacacggcgcagggcggcaacgcggtcatcgaggacgtggacgatggc
gaggatctggagcgcactcggcgagccttcacgctgctgggtatcggtgcgagctatcag
atggggatatttaagatcatagccggcatccttcacctgggcaacgtggaggtgcagtcg
caggaccgcgagcaggagacctgcttcgtcaacaaggaagacaagcacctgaacatcttc
tgcgagctgctggggcttgagagggaccagatggcgcactggctgtgccaccgcaagatc
tcgacgggcgccgagacctacgtgaagcccatggggcgcacgcaggcccagaacgctcgc
gacgcactcgctaagcacgtttacgcacagctcttctcctggatcgtgcaccgcatcaac
aaggcgctgcgctcctccaccaagcagcactccttcatcggcgtgctcgacatctacggg
ttcgagacgtttgaaatcaatagcttcgaacagttctgtatcaactacgccaatgaaaag
ctccagcagcagttcaacctgcacgtcttcaagctggagcaggaggagtacatgcgggag
gagatcccctggacgctcatcgacttctacgacaaccagccgtgcatcgacctcatcgag
gccaagctgggcgttctcgacctgctggacgaagagtgcaagatgcccaagggctccgac
cagagctgggcacagaagctgtacgagaagcacctcgggcgtggcaagcacttcctcaag
cctcgcatgtccaacgtggccttcatcatctgccacttcgccgacaaggtggagtaccag
tgcgacggcttcctcgagaagaaccgggacacggtctacgaggagcagatcaacatcctc
aaggccagccagaagtttgagctggtggcggagctcttccaggacgagggcaaggacgga
gccggcgcggcgacgaccgcggcgccggcgcgtgggagggcgggctcggggagccgggcg
cccccgccctcgcacagcgtgcgctccgctcgcccgggggccaagggctcgagccgcgag
cacaagcgcagcgtcggcctgcagttccggaattctctgcacctgctcatggagacactg
aacgccacgactcctcactacgtgcgctgcatcaagccaaacgatgacaagatggccttc
acgtttgaccccaagcgagccgtgcagcagctgagagcgtgcggggtcctggagacgatc
cgactgagcgccgccgggtacccatccaggtggacctaccaggagttcttcaaccgctac
cgcgtgctcatgaggaagaaggacatcgtgagcgacgacaagaagcagaccgtgcagaac
gtgctggagcacgtcatcaaggacccggacaagttccagtttggcaaaaccaagatcttc
ttccgagcgggccaggtggcgtacctagagaagctgcgcgcggacaagctgcgcgcggcc
tgcatcaaaatgcagaagacgatccgcgggtggctgcagcgcaagcgctacctgcgcatg
cgcgcggcagccatcaccatccagcgccacgtgcgcggccaccaggcccgccggctggcc
cagttcatgcggagtacgcgggcggccgtcatcatccagacggcgtaccgcatgtaccgc
gtgcgccgggcctacgccaagatacgccgcaccgccatccgcatgcaggcccgggcgcga
gggatattcgctcggcagcgataccagcagatgctgtaccggcacaaagcggtggtgctg
cagaagcacgtgcggggctggctggcacggcggctggtgcagcgcgagctgcacgccgtc
gtgcacctgcagtgctgcgtgcgccgcatgcgagcacgccgccagctcaagcagctgcgc
atcgaggcgcgctcggtggagcactacaagacgctgcacaagggcatggagaacaaggtc
gtgcagctgcagatgaaggtcaacgagcagacgcgggacagcagggcgatgcaggagcgc
ctggcggccacggagcacgcgcacgcccaggaggcggagcggctgcgctccgagctggag
cggctgcgtgccggcgccgacgaggctcgcagctcaggcacgcgcctcgccgggctcgcc
gacgaggtgcagcagctgcgggcgcagctggagcgcgcgctcgccgagaagagtgcgctg
caggagaacgcgagcaagtaccagcaggagaccgagaaggtggtggctgagctcatggag
cagacggcgctgctcaagagcgagaaggaggagctgaacctgcgcatccaggccaaggac
aaggagatgcacgatgagctgaaggcgcgcctggcggacgagacgcggcagctgcagggg
gatctggacgaggagcgctcgcgctaccagtcgctcgtcaaggagttctctcgcctcgag
ctgcggcacgagaacctgcgcgaagagaccgagatgctcaaggcaaccgcgaagccgggc
cacaggaggaccggctccacgcagagcagcaacgagtcggagtcggcctacaactccatc
atgacgtccgacgtcgacaccacggacttgacccgccacctggaggaggtggacaccgtc
aaagccgcgatggacttcaccattttcctgaagctgcagaaacgcgtgcgggagttggag
caggagaagcgctggatgcaggagcgcctcgacagacacgagggcaagggcatcgacggc
gactcggtgtccgaccaggccctcccggcagccaagggggcggccgacccccgcactgac
gtggagattgagtacgacgacctcaagcggagcgagctggaagcggagaaccggcggctc
aagtcggagctggacgagctgcggcactcgctgcgggacgacgagcgggccacggggccc
ggccgggcggctggctgcacgccgtacgaccacgtcctgggacacctcaacgccgcgctg
gaggagctcgaggttcgacgcgaggaggtgctgcacctcaagtcgcagatcctgggcggc
gagcggcagaagggatccatgtccgaggcatcggcgcgctttgcccaggacctggagaag
ttggacgacgaggaggaggtgaagagggcgtacatgggcgtgcgcgaggccaacagacgg
gagcgggacctggaagacgaagactttgttctggcctatgaggggttaaaaaagaccacg
aggctgctggagagccagctgcaggcccaggcgcgccgccacgaggcgcagctggagtcg
tcgcggcgcgagacggcgctgctcagggaggagaacgggcggctcgcgcagtcgctgcag
ctgccaccggacgcgcgcgtggagcccagcctacagctggagatcacgcgcctcaccaac
gagaacctggatctctgggaaaagaacgagaaccaggagaagacgatccgcaagctcaag
aagcagctgaagctcctggatcgcaagatcaaagacctggaggcgggggtcatgccccac
gcggagccggcggccgaggaggtggcgacgcgtcacccggctatccagcgcctggagaag
gagttccagggcatgctggagttccacaacgacgacgagaaccgtctcatcaggaacctc
gttgtcgacttgaagccaaatgagctgtcccagaggctccttccggggctgcccgcgtac
atcctgttcatgtgtgtacgccacgccgactacaccaacgatgaccagaaggtccgctcg
ctgctcacctccactatcaacggcatcaagaaagtcctcaagaagcgcaacgatgacttt
gagatcgtctgcttctggctgtccaacacgtgccgcctacttcactgcctcaagcagtac
agcggggaggagggctatgcgcagcagaacacctccaagcagaacgagcactgcctcaag
aactttgacctcaccgagtaccggcaggtgctgagcgacctggcgatccacatctaccag
cagctgatcaagatcattgaggtcgtcctgcagcccatgattgtgcccggaatgctggag
cacgagacgatccagagcgtgtcgagcgtgaaggccaccggcttgcgcaagcgctcgtcc
agcatcgccaacgggggctcccacttcaccctcgagtcgatcctgcgccagctgtccgtg
atctacgacacgatgtgccaccacggcatggaccccgagctggtgaagcaggtggtgcgc
caggtgttctatcagctgggctccaccaccctcaacaacctgctgctgcgcaaagacatg
tgctcgtggagcaagggcatgcagatcaggtacaacgtgagccagctggaggagtggctg
cgggaccgcaagctgcaggacagcggcgccaaggagactctgctgcccctcatcgaggcc
gcccaggtgttgcaggtcaacaagaagaccgagcaggacgctgaggccatctgctccatc
tgcacggcgctctcgcccgcgcagattacgaagatcctgaacctgtacacccctgtgaac
gagtttgaggagcgcgtgaccgtctcgttcattcgcatcatccaggcccagctgaaggag
cgacccaactccacgcagctgctcatggacgccaagcgaatgttccccgtcaccttcccc
ttcaacccctccaccctggggctcgactccattgagatccccggcaccctgagcctcgcc
ttcctcaaccgcgtctag
DBGET
integrated database retrieval system
