Petromyzon marinus (sea lamprey): 116942284
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Entry
116942284 CDS
T09614
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04137
Mitophagy - animal
pmrn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116942284
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116942284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116942284
03009 Ribosome biogenesis [BR:
pmrn03009
]
116942284
04131 Membrane trafficking [BR:
pmrn04131
]
116942284
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmrn04147
]
116942284
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116942284
Ribosome biogenesis [BR:
pmrn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
116942284
Membrane trafficking [BR:
pmrn04131
]
SNARE
SNARE associated proteins
Others
116942284
Autophagy
Aggrephagy
Other aggrephagy associated proteins
116942284
Exosome [BR:
pmrn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116942284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_22
AAA_2
TIP49
AAA_14
NPHP3_N
Vps4_C
RNA_helicase
AAA_28
Mg_chelatase
Parvo_NS1
nSTAND3
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ABC_tran
DUF815
AAA_24
AAA_lid_PRS2_C
Sigma54_activat
TsaE
ResIII
NB-ARC
NACHT
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
116942284
NCBI-ProteinID:
XP_032809885
UniProt:
A0AAJ7WTZ4
LinkDB
All DBs
Position
1:8679927..8711313
Genome browser
AA seq
811 aa
AA seq
DB search
MATGGVDVSTAILKQKQRPNRLVVDEAINEDNSVVSLSQPKMDELQLFRGDTVMLKGKKR
RETVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVVSIQACPDVKYGKRVHVLPIDDTVE
GITGNLFEVYLKPYFLEAYRPVRKGDIFLVRGGMRAVEFKVVETDPSPFCIVAPDTVIHC
EGEPINREEEEEALNEIGYDDIGGCRRQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY
GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID
ELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRTHVVVMAATNRPNSIDPALRRFGRFD
REVDIGIPDSTGRLEILQIHTKNMKLSVDVDLEQIANQTHGHVGADLAALCSEAALQAIR
KKMDVIDLDDETIDAEIMNSLAVTMDDFRWALAQSNPSALREMVVEVPNVTWEDIGGLES
VKRELQELVQYPVEHPEKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKG
PELLTMWFGESEANVRDVFDKARQASPTVLFLDELDSIAKARGGGVGDGGGAADRVINQI
LTEMDGMGVNKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRTAILKANLRKS
PIAKDVDIGYLSKTTNGFSGADLMEICQRACKLAIRESIEAEMRRERERQGNPDAAMDVE
DEDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPGGQGGPGGG
QGGAGGAGGGGGGGGGSGGMYQDDGDDDLYS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggccacgggcggagttgatgtgtcgacggcaatcttgaagcagaagcagaggcccaac
cgcctggtggtggacgaggccatcaatgaggacaacagcgtggtgtcgctgtctcagccc
aagatggacgagctgcagctgttccgcggggacaccgtgatgctgaagggcaagaagcgg
cgcgagacggtgtgcatcgtgctctccgacgacacgtgctctgacgagaagatccgcatg
aaccgcgtcgtgcgcaacaacctgcgcgtgcgtctgggcgatgtggtcagcatccaggcc
tgcccggacgtcaagtacggcaagcgagtgcacgtgctgcccattgacgacacggtggag
ggcatcacgggaaacctgtttgaggtctacctcaagccgtacttcctggaggcttaccgg
cctgtacgcaaaggagacattttcctcgttcgaggcgggatgcgtgcggtggagttcaag
gtggtggagacagacccgagccctttctgcatcgtagcgccggacactgtgatccactgt
gagggcgagcccatcaatagggaggaggaggaggaggcattgaacgagatcggctatgac
gacatcggagggtgccggcggcagctggcgcagatcaaggagatggtggagctgcccctg
aggcacccggcactcttcaaggccattggcgtcaagccgccccgcggtattctgctgtac
gggcctcctggcaccggcaaaaccctcatcgcccgtgccgtcgccaacgagactggggcc
tttttcttcctgattaacggtcccgaaatcatgagcaagctggcgggtgagtcggagagt
aacctgcgcaaggccttcgaggaggccgagaagaacgctccggccatcatcttcattgac
gagctcgacgccatcgcgcccaagcgagagaagactcacggggaggttgagcggcgcatc
gtgtctcagctgctcacgctcatggacggcctcaagcagcgcacccacgtggtcgtcatg
gcagcgacgaaccggcccaacagcatcgaccccgcgctgcgccgcttcggccgctttgac
cgagaggtcgacatcggcatcccggactcgacggggcgactggagatcttgcagatccac
accaagaacatgaagctgtcggtagacgtggacctcgagcagatcgcgaaccagacgcac
ggccacgtgggcgccgacctggcggcgctgtgctcagaggccgcgctgcaggcgatccgc
aagaagatggacgtcatcgacctggacgacgaaaccatcgacgccgagatcatgaactcc
ctcgccgtcaccatggacgacttccggtgggccctggcccagagcaacccatcagcactg
cgcgagatggtggtggaggtgcccaacgtgacgtgggaggacatcggtggcttggagagc
gtcaagagggagctgcaggagctggtgcagtaccccgtggagcacccggagaagttcctc
aagttcgggatgacgccctccaagggcgtgctgttctacggcccgccgggctgcggcaag
acgctgctggccaaggccatcgccaacgagtgccaggccaacttcatctccatcaagggg
cccgagctgctcaccatgtggttcggcgagtcggaggccaacgtgcgcgacgtcttcgac
aaggcgcgtcaggcgtcgcccacggtcctcttcctcgacgagctcgactcgatcgcgaag
gcgcgcggaggcggcgtcggggacggtggcggagcggccgaccgcgtcatcaaccagatc
ctcaccgagatggacggcatgggcgtcaacaagaacgtcttcatcatcggggccaccaac
cggcccgacatcatcgaccccgccatcctgcgcccgggacgcttggatcagctgatctac
atccccttgccagacgaaaagtctcgcaccgccatcctcaaggccaacctgcgcaagtcg
cccatcgcaaaggatgtggacatcggctacctctccaagactaccaacggcttctcgggc
gccgacctcatggagatctgccagcgcgcgtgcaagctcgccattcgcgagagcatcgag
gccgagatgcggcgcgagcgtgagcggcagggcaacccggacgccgccatggacgtggag
gacgaggaccccgtgcccgagatccgccgcgaccatttcgaggaggcgatgcgctttgcc
cgccgctccgtctccgacaacgacatccgcaagtacgagatgttcgcgcagacgctgcag
cagagccgcggattcggcagcttccgctttcccggcggccagggcggccccggcggaggc
cagggcggcgccggcggcgccggtggcggcggcggcggcggcggcggcagcggcggcatg
taccaggacgatggcgacgacgacctctacagctag
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