Petromyzon marinus (sea lamprey): 116942379
Help
Entry
116942379 CDS
T09614
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04010
MAPK signaling pathway
pmrn04260
Cardiac muscle contraction
pmrn04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116942379
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
116942379
04261 Adrenergic signaling in cardiomyocytes
116942379
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
116942379
Ion channels [BR:
pmrn04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116942379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
Cache_3-Cache_2
dCache_2
VWA_CoxE
Fe_dep_repress
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
116942379
NCBI-ProteinID:
XP_032810094
UniProt:
A0AAJ7WTZ3
LinkDB
All DBs
Position
14:9311555..9470728
Genome browser
AA seq
1145 aa
AA seq
DB search
MATAACARGSALVSLALAMMSLVRADVFPHPWTIKQWAGRLDRELERVVRQASGVDQLKQ
LYTEHKHLFEVRRNDAQHLVESVTGEIEKVLDKKVKALERLARTAEELQRAHQWSDNIKE
EDMLYYNAKKELEEEYSVGNGEQDSEEEEEEDGHEINSPRIEPTFKQDSAFGFSVDKNHS
AIHIPTDIYKASTIILNELNWTAGLDEVFKLNKEEDPTLLWQVFGSATGLTRFYPATPWV
APGDVDLFDVRRRPWYIQGASSPKDMVIIIDVSGSVSGLTLKLMKKSVSEMLETLSDDDY
VNVASFHNEAVPVSCFNHLVQANVRNKQMLSESVEKLTAKGMTNYKAAFTYAFEQLLNTN
VTRANCNKMIMMFTDGGEDRAQDVFENYNWPKKEVRVFTFSVGQHNYNVAPIQWMACANK
GFYFEIPSIGAIRINTQDYLDVLGRPMVLAGPKAKKVQWTNVYKDALNLGLVITGTMPVF
NISKNAGEQQNQLLLGVMGVDISLDDIKKLTTQYNLGPNGYFFAIDPNGYVLLHPNLKPK
VTKFEEPVTLDFLDAELENDIKLLIRQSMIDKKSGMRTFEMLIKSLDERYIDKSMRTYTW
TPMQSAEYSLALVLPSYSNYYIRSSLTDQILQAQFKKGTRKEDLEFLLPSSFETIGHVFI
APREYCKNLRPMSDNAEFLRTFIGEMEKKTPDSEHCNTDMIYNLILDAGITAKLAQTHWQ
KQNIASMGILTLFVATDGGITRVYPYSSDDEWEENPEPHESSYYKRSLDNKSFIYRATHF
GAARQAYGANVSMGILASRVVDVNIDGKSLRPAVVGVKLNPEFWVPRFRLLTNNQTDRGK
NPKKILQCMDNSCEMDCDSKSNILECVVLDDGGFLVFSNQESHQEKLGEFFGEVDPHLFH
EMHRLAVYSRVESYDYQSVCDPPPESHAGAAHRSIRIPKIYDILNLAWWFSAAAWSLLQQ
LLCGITVPNLFSPSVDARDPLDLKGKVSCVMLQTQYYFPNNNKSFHKLIDCGNCTRYFHA
EKLGTSNLVLVVAELFSKECTVCEVRKIKQAKQKSQGPDPCLLAETPRYRKGPDACFDYN
VDDEPMCSVSNQASNVIPSTLALFFIPALVQILVQGLPAMAPHSHRQLLLVTVTHPSVQT
APLKQ
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggcgtgtgcgagaggcagcgccctcgtctcacttgctctggccatgatg
agcctggtccgcgccgacgtcttcccgcatccgtggacaattaagcaatgggcggggagg
ctcgaccgggaactggagcgcgtcgtgcgtcaagccagcggggtcgaccaactcaagcag
ctgtacacggagcacaagcatctgtttgaggttcggaggaacgatgcacagcatctggtg
gagtcggtgaccggcgagattgagaaagtcctcgacaaaaaagtgaaggctctggagagg
ctggccaggactgcagaagaactgcagagagctcaccagtggagtgacaacatcaaggaa
gaagatatgctttattataatgcgaagaaagagcttgaagaggaatattcagtgggcaac
ggagagcaggattcggaggaggaggaggaggaagatggacatgagattaattctccgcga
atcgagccgacgtttaagcaagactccgcgtttggattctctgtggataaaaatcactcc
gcgattcacatcccaactgacatttacaaagcctccacgatcattctgaacgagctgaac
tggacggcggggctcgatgaggtgttcaagctgaacaaggaagaggaccccactctgctg
tggcaggtgtttggaagtgccacaggtctcaccagattttatccagcaactccctgggtg
gctccgggagacgtggatttgtttgatgtccgcaggcggccgtggtacatacaaggggcc
tcatctcccaaggacatggtgatcattatagacgtgagcggaagtgtcagtggactcaca
ttaaaactgatgaagaagtcggtgtctgaaatgctggaaaccctttccgatgatgattac
gtgaatgtagcatcttttcacaacgaagccgtcccggtgtcctgcttcaatcacttagtg
caagccaacgtacgcaacaagcaaatgctcagcgagtccgtggagaagctaactgccaag
ggaatgacgaactacaaggccgcgtttacgtacgcgtttgagcagctcttaaacaccaac
gtgacccgagccaactgcaacaagatgatcatgatgttcaccgacggaggagaggaccgc
gcccaggacgtttttgagaattacaactggccgaaaaaagaggtgcgggtgtttaccttc
tccgtgggacagcacaattataacgtggcccctattcagtggatggcctgtgccaacaaa
gggttttattttgaaatcccttccattggcgccatccgcattaacactcaggattatctg
gatgtccttggaagacctatggtactggcaggacccaaggccaagaaggtgcaatggaca
aatgtctacaaggatgcattgaacctgggtctggtcatcacgggcaccatgccagtgttc
aacataagcaagaacgcaggagagcagcagaatcagttgctgcttggcgtgatgggagtt
gacatatcgctcgacgacataaagaagcttaccacgcagtacaatctcggtccgaacggc
tacttctttgcaatagaccccaacggctacgtgctgcttcaccccaacctgaaacccaag
gtgacaaaatttgaagagccagtcacccttgactttctggatgccgaactggaaaatgat
attaaattgctgatcaggcagagcatgattgacaagaagtctggaatgcgcacttttgag
atgctaatcaaatccttggatgagaggtacatagataaaagcatgagaacttatacttgg
acaccaatgcagtcggctgaatacagcctcgctctggtcttgccatcttatagcaactat
tacatcaggtcatcacttaccgaccaaatactacaggcacaattcaaaaagggcacacgc
aaggaggatttagagttcctcttgccgagctccttcgagaccattggacatgtgttcata
gcccccagagagtactgcaaaaatctcagaccgatgagtgacaacgctgaattcctgcgg
acatttattggcgagatggagaaaaaaacgccggattcggagcattgcaacacggatatg
atatacaacctcattcttgatgctgggatcactgcaaagttggctcaaacgcattggcaa
aaacaaaatatagcaagcatgggcattctaacactctttgtggctacggatggtggaatt
acaagggtatacccttacagtagtgacgatgaatgggaggaaaatccagaaccgcatgaa
tccagttattacaagagaagcttagacaacaagtcattcatctacagggccacacatttc
ggagccgcaaggcaagcatatggtgccaacgtgtccatgggaatcctggcttcacgcgtt
gtcgacgtcaacatcgatggcaagagcctgcgacctgcagtggtcggagtgaagctgaat
cccgaattctgggtgcccagattccgactcctcaccaataatcagacagacagaggcaag
aatccaaaaaagattttgcagtgtatggacaactcttgcgaaatggactgcgactccaaa
agtaatatcttggaatgtgtggtgttggatgatggaggtttcctcgtattttcaaaccaa
gaatctcaccaagaaaagctgggcgagttcttcggggaggtggacccccacctgttccac
gagatgcacagactggcggtgtactcacgcgtcgagtcctacgactatcagtcggtgtgc
gaccctccgcctgagtcgcacgcgggcgccgcgcacagatccatccgcatcccaaaaata
tatgacatcctaaaccttgcctggtggttctctgcagcggcatggtcgctgctccagcag
ctgctgtgtggaattacggtaccaaacttgttcagtccgtccgtggacgcgagggacccc
ctggacctgaagggcaaggtcagctgtgtgatgctgcagacgcagtactacttcccaaac
aacaacaagtccttccataaactcatcgactgtggcaattgcaccaggtacttccatgcg
gagaagctgggcaccagtaacctggtgctggtcgtggcagagctgttctcaaaagaatgt
acagtgtgcgaagttcggaaaatcaagcaggccaagcaaaagtcgcaaggacccgacccc
tgtctgctggcagaaacgccacggtataggaaaggacccgatgcctgctttgattacaat
gtcgatgatgagcccatgtgctccgtgtcgaaccaagcctccaatgtgatcccttctact
cttgctctatttttcattccagcattagttcaaatccttgtccagggtctgcctgctatg
gctcctcattcccacagacagctgcttctcgtgaccgtcacccacccatccgtccaaact
gcccccttaaaacaatga
DBGET
integrated database retrieval system
