Petromyzon marinus (sea lamprey): 116942559
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Entry
116942559 CDS
T09614
Name
(RefSeq) LOW QUALITY PROTEIN: YTH domain-containing family protein 3-like
KO
K20102
YTH domain-containing family protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116942559
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116942559
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
116942559
NCBI-ProteinID:
XP_032810511
UniProt:
A0AAJ7T569
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Position
15:complement(1596459..1614963)
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AA seq
871 aa
AA seq
DB search
MSAARLEQRTKGQSGKVQNGSMHSKDTVNDDDFEAYLTNQSSQNNSYTAMTDPYMPSYYG
PSMGFPSYSLSAAEAAWSTGGDPPIPYLAHHYGQTLANGEAHHHFLQPEPGFLGQGGLGA
PAPAGAGGGLGAHATYLGQHAPGPLQLLPRGARVRGLGWGRRRRRRRRRPRPRAARGQPP
GQQSSAQASAAAVGAAVYSGNGGGNSSCSSSSCSSSSYVYPPSSLGGAAMDAHATFANEG
INKAPGPVSSMEQGVAGLKLDGSNGGGGGDVANKTVGAPIVGSMFSVSGMTVPTIPVPVS
NSAAQALLHQQHQQQQQQQAAAAMAQAQKPTSWAAIASKPAKPQPKQLKGKGGSAGGAAA
GAAMPPPPPIKHNMDIGTWDNKGVVAKAAPPVCGPGEAPGPQQQQQQQQSVSPSPAVAVT
SAAPVMSLPQPSSQAQSLAPVQVSMQANQQPNSQPGSSLHQQQQQQQQQQQQQQQHQQQQ
LYLHHQQQQQQQQQQQHHHQQQQSMQHTMQQMHNQLQQPMQHGQLMQQQPGRWSAPRSRN
GGVFGGDMLTVGAMSSVAQQQQQQHQQQPLPHHPHHHSLPHQQQQQPQHHQHHQQQQQQQ
QHHQLHHHHHTMQPLAPPQQPPPPMPSGPIMPASDPSPPPPLPHHQQQQQHQQQQQQLAP
VGLALSVVAATPLPPESHPVLEKLKVANSYNPRDFECSPRSARAFIIKSYSEDDVHRSIK
YSIWCSTEHGNRRLDGAYRAMQGKGPVYLLFSVNGSGHFCGVAQMTSPVDYQTCAGVWSQ
DKWKGKFEVNWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLDKARQVLRVIAAFR
HTTSIFDDFAHYERRQEEEEGQKKDRQIRNK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggcccgactcgagcagcgaacgaaaggacagtctggtaaagttcaaaacggt
tcgatgcactccaaggatacagttaatgacgacgactttgaagcttacctgaccaatcag
agcagccagaacaacagctacacggccatgaccgacccgtacatgcccagctactacggc
ccgtccatgggcttcccctcgtactcgctgagcgccgccgaggccgcgtggtccacgggg
ggcgacccgcccatcccgtacctggcccaccactacggccagacgctcgccaacggggag
gcccaccaccacttcctgcagccggagccgggcttcctgggtcagggcggcctcggggcg
ccggcgcccgcgggggccggcggcggcctcggcgcgcacgccacctacctggggcagcac
gcgccggggccccttcagcttcttccccggggggcccgagttcgcggcctgggctggggc
cggcggcggcgcaggcggcgcaggcggccgcggccacgagcggcgcgggggcagccgccc
gggcagcagagttcggcgcaggcctcggcggcggccgttggcgccgccgtctacagcggc
aacgggggcggcaacagcagctgcagcagcagcagctgcagcagcagcagctacgtgtac
ccgccgagctcgctgggcggggcagcgatggacgcccacgccaccttcgccaacgagggc
atcaacaaggcgccgggccccgtgagcagcatggagcagggcgtggccgggctcaagttg
gatggcagtaacggcggcggcggcggcgacgtcgccaacaagacggtcggcgcgcccatc
gtgggctccatgttttccgtgagcggcatgaccgtgccgaccatccccgtgccggtatcg
aactcggcggcgcaggctctgctgcaccagcagcaccagcagcaacagcaacagcaggcg
gcggcagcaatggcgcaggcgcagaaacccacgtcttgggctgcgatcgcaagcaagccg
gccaaaccgcagcccaagcagctgaagggaaaggggggttctgcggggggtgccgccgcc
ggcgccgccatgccccctccgccccccatcaagcacaacatggacatcggcacgtgggac
aacaagggggtcgtggccaaggcagcgccaccggtgtgcgggcctggcgaggcgcctggc
cctcagcagcagcagcagcagcagcagtcggtgtccccgtcaccggcggtggctgttact
tctgcggcgccggttatgtcacttccgcagccgagcagccaggcccagtcgctagcgccc
gtgcaggtgtcgatgcaagccaatcagcagccgaatagccagcccggcagttcgcttcac
cagcaacagcagcagcaacagcagcaacaacaacagcagcagcagcatcagcagcagcag
ttatatcttcatcaccagcagcagcagcaacaacaacaacagcagcagcatcatcaccag
cagcagcagtcgatgcagcacacaatgcaacagatgcataatcagttgcagcaaccgatg
cagcacgggcagcttatgcagcagcagcctgggcgctggtccgcaccacgcagtcgcaac
ggaggcgtgttcggaggcgacatgctgacggtcggcgccatgagctcggttgctcagcag
cagcagcagcagcaccagcagcaacctctaccccaccacccgcaccaccactcgcttccc
caccagcagcaacagcagccgcagcaccaccagcatcaccagcagcaacagcagcaacag
cagcaccatcagttgcaccatcaccaccacaccatgcagcctctggcacctccgcaacaa
ccgccaccgcccatgccgtccggccccataatgccggcgtcagatccgtcccctccgcca
ccactgccgcaccaccagcagcagcagcagcaccagcagcagcagcagcagctggcaccc
gtgggcctggcgctgtcggtggtcgcggcgacgcccctgccgccggagagccacccggtg
ctggagaagctgaaggtggccaacagctacaacccgcgcgacttcgagtgcagcccgcgc
agcgcacgggccttcatcatcaagagctactcggaggacgacgtccaccgctccataaag
tactccatctggtgcagcaccgagcacggcaaccggcggctggacggcgcctaccgcgcc
atgcagggcaagggccccgtctacctcctcttcagcgtcaacggcagcggccacttctgc
ggcgtggcgcagatgacgtcgcccgtggactaccagacgtgcgccggcgtgtggtcgcag
gacaagtggaagggcaagttcgaggtgaattggatcttcgtgaaggacgtgcccaactcg
cagctgcgccacatccgcctggagaacaacgagaacaagccggtgaccaactctcgcgac
acgcaggaggtgccgctcgacaaggcgcgccaggtgctgcgcgtcatcgccgccttccgc
cacaccacctccatcttcgacgactttgcgcactacgagcgccggcaggaggaggaggag
ggccagaagaaggatcgacaaattcgtaacaaatga
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