Petromyzon marinus (sea lamprey): 116942562
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Entry
116942562 CDS
T09614
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116942562
04121 Ubiquitin system [BR:
pmrn04121
]
116942562
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
116942562
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
116942562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
Motif
Other DBs
NCBI-GeneID:
116942562
NCBI-ProteinID:
XP_032810557
UniProt:
A0AAJ7T3J0
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All DBs
Position
1:complement(6228080..6231905)
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AA seq
664 aa
AA seq
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MESASTADVDILLFPPEKRIKSAVWEYFGYQKDDKGCLINTGWPICRTCLVAVSNKAGNT
SNMMTHLREYHPALHTEASSSAGVSFVSPSSTPATPRSIPLSFAETIEGTRSKKLNRESK
EAKALDKAVSYFLAKDMQPFCTVEMPGFKQLVSKLNPKYDMPGRTFFTTKAVPELYNETK
AKVQQSLDSACWFSVTTDTWVGCTGKGEPYMSLTVHYIRVTADGEWKLESHCLDTCYIPE
DYSGMQIAEAFQEMLQEWRLNVLKLSSVITESATSMKKAFSERMKLQWLGCFGQNLNLAV
HKSLKIEIVESAVNLCRNVVSAFNRSWKKKRELTTKQAELGMEQQTLIQDTTTRWGGIYE
MVARLLEQRQPVRAVLSADQGNLHLNPMDTDIAILEDLAAVLGPLHEFTDSLASEKYVTV
SALRPVLHHILNDILGEKYGDTSLARDLKTCIAGELKSCYASDNVVKILDVCSFLDPRFK
SDFVTDLPSVTVDLMECISAVEENIFTTQSAATSTKLESGASSAGASANVTTSTVKEEVP
GATGAKTNKLGAILKKITAANQLHKEGTDADDGASLASRVRKEIHHYISEPLYNAESDPL
RWWSVRCIDFPLLSKAAEKYLCIPATSVPSEQAFSTPGQIVTPFKSQLSHEHLNMLLFLH
HNLK
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggcatcaacagcagatgttgacattttgctctttccgccagagaaacgaata
aaatcagctgtctgggaatattttggctaccagaaagatgacaagggctgccttattaat
actggatggccaatttgccgaacgtgtttggttgcagtatccaacaaggctggtaacaca
tcaaacatgatgactcatttgcgtgaatatcacccagcactgcatacagaagcatcatca
tctgctggtgtttcctttgtttcaccaagctccacccctgctactcctagatccattcca
ctgtcatttgctgagactattgaagggacaaggtctaagaagttgaatcgtgaatcaaaa
gaggccaaagctttggataaggctgtgtcctacttccttgctaaagacatgcaacctttt
tgcacagttgaaatgcctggttttaagcagcttgtctccaagctgaatcctaagtatgac
atgcctggcagaacctttttcacgacaaaggcagtaccagaactttacaatgaaacaaag
gccaaggtccagcagtcattggattctgcctgctggttctctgtcacaactgacacctgg
gtgggctgcactgggaaaggggagccctacatgagtctgacagtgcactacatcagggta
acagcagacggtgaatggaagctcgagtcacactgcttggatacatgctacatacccgag
gattacagcggcatgcaaattgcagaagctttccaagaaatgctgcaagagtggaggcta
aatgtcctcaaactgagcagcgtcatcacagaaagtgctaccagcatgaaaaaggcattc
agtgagcggatgaaattgcagtggttgggctgctttggccaaaacctaaacttggccgtt
cacaagtctctgaagatcgagattgtggagtcggcagtgaacttatgtcgtaacgtggta
agtgccttcaataggagctggaagaagaagagggaattgacgacgaaacaagctgagctg
ggaatggagcagcaaacccttattcaagacacaacaaccaggtgggggggcatatacgaa
atggtggcccgacttctggaacagcggcaacctgtgcgcgctgtgttgtcagcagaccaa
ggaaacttgcatcttaatccaatggatactgacattgcaatacttgaagacctggcagcg
gtgctcggcccactgcacgagttcacagactcattggcctctgaaaaatatgtcactgtt
tctgccttgcgaccagtattacaccacatcctgaatgacatattgggggaaaagtacggt
gacaccagcttggcgagagacttaaagacgtgcatcgctggtgaactcaagtcttgctat
gccagtgacaacgttgttaagattctcgatgtgtgctcatttctagatcctcgattcaag
agtgactttgtaacagatttaccatctgtcaccgtggatttgatggaatgcatcagcgca
gtggaagaaaacattttcacaacacaaagtgctgccacgtctacaaaactagaatccggt
gccagctcagcaggagcttctgctaatgtgactacctctactgtgaaagaagaagtgcct
ggcgcaaccggagccaaaactaacaaacttggggcaatactgaaaaagattacggccgcc
aaccaacttcataaagaaggcactgacgctgatgacggtgcttcattagcaagcagagtg
aggaaagagatccaccactacatttctgagcctctatataatgctgaaagtgaccctctg
cgttggtggtccgttcgttgtattgactttcccttgctgtcaaaggcagctgagaagtat
ctgtgcatccctgccaccagcgtaccatctgagcaagcattcagcacaccgggacaaatt
gtcacaccgtttaaatcgcagctgtctcatgaacacttaaacatgcttcttttcttgcat
cacaacttaaagtaa
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