KEGG   Petromyzon marinus (sea lamprey): 116942593
Entry
116942593         CDS       T09614                                 
Name
(RefSeq) tripartite motif-containing protein 55-like isoform X1
  KO
K10654  tripartite motif-containing protein 55
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116942593
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmrn04121]
    116942593
Ubiquitin system [BR:pmrn04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    116942593
SSDB
Motif
Pfam: zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 RING_XB3-XBAT31 zf-B_box zf-RING_5 zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-RING_6 Sina_RING PHP PAH_ZNF598 DUF3574 Prot_inhib_II Zn_ribbon_FGT1_2 Lipase_GDSL_3 Ima1_N
Other DBs
NCBI-GeneID: 116942593
NCBI-ProteinID: XP_032810575
UniProt: A0AAJ7WUL7
LinkDB
Position
15:complement(3769945..3782508)
AA seq 361 aa
MEYSSLLKPTENLENLERQLMCPICLEVFSKPVVILPCQHNLCRKCANDVFQAANPFMVT
RGNTVTSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKTESTRPVKKVDHPMCV
EHAEEKINIFCLTCSMPTCSLCKVFGAHKDCQVAPLGSVYKSHKNDLSDSISRLVASNDR
VQLMISEMEHSCKVIDENSRVQKQMLCEQFDGVYAALEERKQEMLMVISQEQEDKNQHVR
DLIKQYNEHLQSASKLVETAFQAMEEPEAAAFLQSASALQKSVVDATKGSDMPKMEMGYE
NMNHFLVDLDNVQEAVRGIDFGKDAEDEDEEEDEEGEEVAESEEGNSDSSDADGEAHTTG
R
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggagtactcgtcgctactgaaacccacggagaacctcgagaacttggagagacagctt
atgtgtccgatctgcctggaggttttctccaaacccgtcgtcattctgccgtgccagcac
aacctctgcagaaagtgtgccaatgatgttttccaggccgccaacccgttcatggtgacg
cgaggtaacacggtgacgtccggaggtcgtttccgctgtccctcgtgtcgccacgaggtg
gtgctagaccggcacggcgtgtacggcctgcagcgtaacctgctggtggaaaacatcatc
gacatctacaagacagagtccaccagaccggtgaaaaaggtggaccacccgatgtgcgta
gagcacgcggaggagaagatcaacatcttctgcctcacctgcagcatgcccacgtgctct
ctgtgcaaggtgttcggagctcacaaggactgccaagtggcccccctggggagcgtctat
aaaagccacaagaacgacctcagcgactccatttccagactggtggcgagcaatgacagg
gtgcagctgatgatcagcgagatggagcacagctgcaaagtcatcgatgagaacagccgg
gttcagaagcagatgctgtgcgagcagttcgacggcgtttacgcggcgctggaggagagg
aaacaggagatgctgatggtcatctcgcaggagcaggaggacaagaaccagcacgtgcgg
gacctcatcaagcagtacaacgagcaccttcagtccgcctccaagctggtggagaccgcc
ttccaggccatggaggagcccgaggctgcggcgttcctccagagtgcaagcgctcttcag
aagagcgtcgtcgatgctacaaagggctccgacatgccgaagatggagatgggctacgag
aacatgaaccacttcctcgtcgacctggacaacgtccaggaggccgtgaggggcattgac
ttcggcaaagatgcagaggatgaggacgaagaggaggatgaggagggggaggaggttgca
gagtctgaggaaggtaactcggacagctcagatgcagacggtgaggctcacaccacggga
cgttga

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