Petromyzon marinus (sea lamprey): 116942602
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Entry
116942602 CDS
T09614
Symbol
TAF2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116942602 (TAF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmrn01002
]
116942602 (TAF2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmrn03021
]
116942602 (TAF2)
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116942602 (TAF2)
Peptidases and inhibitors [BR:
pmrn01002
]
Metallo peptidases
Family M1
116942602 (TAF2)
Transcription machinery [BR:
pmrn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116942602 (TAF2)
Coactivators
SAGA/TFTC/STAGA complex
116942602 (TAF2)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116942602 (TAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1_N
Peptidase_M1
DNApol3-delta_C
Motif
Other DBs
NCBI-GeneID:
116942602
NCBI-ProteinID:
XP_032810604
UniProt:
A0AAJ7WUG8
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All DBs
Position
15:4311778..4344781
Genome browser
AA seq
957 aa
AA seq
DB search
MNRKKSDKGFESPRPFKLNHQVLSINNINFQKKSIIGHVELTLFPTTATLNKIRLNCKQC
RIYRVRVNDKEAAFMYNDPTLEVCHQENKQRNLNFFSNAYAASVQAVEPDYGNGELLIKV
PSDLREHVEEMRMLKVHVEFWMDNPKGGLQFVVPDLEGTLAERAAHVFSYGHQNASRSWF
PCIDSYSELCMWKLEYTVDASMVAVSNGDLVETIYTHDMRRKTFHYQLTTPTAAPNISLA
VGPFEILVDPFMHEVTHFCLPQLLPLLKQTTSFLHEIFEFYEEVLTCRYPYTCYKTVFVD
QAYVEATSYASMSIFSTNLLHGATIIDQTPITRKRIAKALAQQFFGCFISRMSWTDDWVL
KGISGYIYGLWIKKTFGNNEYRYWIKKWLSRVTDYELQTGGILLHPTFPAGKEKESPTPH
LHFSVCYPHTLSWEYYKLYQAKAHLVLRLIENRISMEFLLQVFNKLLSLANTASSQRFQS
HMWSQMLLSTSAFLKSISIVSGKDIQPLIRQWVDQSGVVKFYGTFVFNRKRNILELELKQ
DCIAQGTQKYVGPLTVTVQELDGSFNHNLQIEENSTRHEIPCHSKSRRNKKKKIPLLNGE
EIDMDLSLMDADSPLLWIRIDPEMSILRRVELEQPDFMWQYELRYERDVVAQGEAISALE
RFPTPQSRLALTDILEHEQCFYRVRMQSTFCLAQIANAMVNTWNGPPAMKSIFTRMFCCK
TCPNIIKTNNFCNFQSYFLLKTIPVTMAMQRDIHGMCPKEVLTFLLDLIKYNDNRKNKFS
DNYYRASLIEALANSVTPAVAVSNENRTVENLNADVRLVLEEITRFLNMEKLLPCYRHTV
TISCLKAIRVLQKNGHIPSDPAIFKAYAQAGHFVDIRLAALEALVDFTRVDMSAEVLQWL
LDLVHTDPIPYIRHKILSMMIRVPPFARGSDSPLCSEALVDNLWKLMNSGTQARACK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaaagaaaagcgacaagggatttgagagcccgcgcccgttcaaattgaaccat
caggtactcagcatcaacaacatcaacttccaaaagaagtccatcattggccatgtggaa
ctcacgctgtttcccaccacggcgacgctcaacaagatccgcctcaactgcaagcagtgc
cgcatctaccgcgtgcgagtcaacgacaaggaggccgccttcatgtacaatgaccccacg
ctggaagtgtgccatcaggagaacaaacagcgcaacttgaacttcttctccaatgcgtac
gcggcgtccgtgcaagcggtggagccagactatggcaacggcgagcttttgatcaaagtg
ccgtcggacctacgcgagcatgtggaagagatgcgcatgctgaaggtgcatgtcgagttc
tggatggacaaccccaagggtggactgcagtttgtggtgcccgatctggagggcaccttg
gctgaacgggccgcccacgtcttctcctatgggcaccagaatgcatcgaggtcttggttt
ccgtgcatcgactcgtactcggagctgtgcatgtggaagctggagtacacggtggacgcc
tccatggtggccgtgtctaacggcgacctcgtggagaccatatacacgcacgacatgcgc
cgcaagacgttccactaccagctcacgacgcccacggccgcgcccaacatctcgctcgct
gtggggccctttgagatcctcgtggaccccttcatgcacgaggtgacgcacttctgcctg
ccacagctgctgccgctgctcaagcagaccacctcgttcctgcacgagatttttgagttt
tacgaggaggtgctcacgtgccgctacccgtacacctgctacaagacggtgttcgtggac
caggcctacgtggaggccacctcctacgcctccatgagcatattcagcaccaacctgttg
cacggagcaacgataatcgaccagacgcccatcactcgcaagagaatagccaaggctctg
gcgcaacagttttttggctgtttcatctcacgaatgtcctggactgacgattgggtgctt
aaaggcatctccggctacatttacggcctgtggatcaaaaagaccttcgggaacaacgaa
tatcgttactggattaaaaagtggttgtcccgagtgacggattatgagctgcaaaccgga
ggcatcctcctccatccgaccttccctgccggcaaggagaaggagagtcccactcctcac
ctgcacttctccgtgtgctacccgcacacgctctcgtgggaatactacaaactgtaccag
gcgaaggcgcacctggtgctcaggctcatagagaaccgcatcagcatggaattcctgctg
caggtgtttaacaagctgctctctctggccaacactgcatcttcccagcgcttccagtcc
cacatgtggagccagatgctgctgtccaccagtgcgttcctcaagtccatctctattgtt
tcgggcaaggatatccagccgctgattcgtcagtgggtcgaccagtctggtgtggtgaag
ttctacgggacgttcgtgttcaaccgcaagcgcaacatcctggagctggagctcaagcag
gactgcatcgcgcagggaacgcagaaatacgtgggtcctctgacagtcaccgtgcaagag
ttggatggctcgttcaatcacaacctgcagatcgaggagaacagcacgcgccacgagatt
ccgtgccactccaagagccgccggaacaaaaagaagaagatccctctgctaaacggggag
gagatcgacatggatctgtcattgatggatgcggactcaccgctcctgtggatccgcatc
gacccggagatgagcatcctgcgacgtgtggagctggaacagccggacttcatgtggcag
tacgagctgcgctacgagcgcgacgtggtggcgcagggcgaggccatctccgccctggag
cgcttccccacgccccagtcgcgcttggcgctcaccgacatcttggagcacgagcagtgc
ttctaccgcgtgcgcatgcagtccaccttctgcctggcccagattgccaacgcgatggtg
aacacgtggaacggacccccagcgatgaagtcgatcttcacacggatgttctgctgcaag
acctgccccaacatcatcaaaacgaacaacttctgcaacttccagagctacttcctcctc
aagaccatccccgtcacaatggccatgcagagggacattcacggcatgtgtcccaaggag
gtgctcacattcttgctggatctcatcaagtataacgacaaccgtaaaaacaagttctcg
gataactactaccgggcgtcactgatcgaagcgctcgccaactccgtgacgccggcggtg
gcggtgagcaacgagaaccgcacggtagaaaacctcaacgcggacgtgcgcctggtgctc
gaggagatcacgcgcttccttaacatggagaagctgctgccctgctatcggcacaccgtc
accatcagctgcttgaaggcgattcgtgttctgcaaaaaaacggacacatccccagcgac
ccggccatcttcaaggcgtacgcacaggctggccactttgtcgacatccggctcgccgca
ctcgaggccctggtggatttcacgcgagtggacatgagcgcagaagtgttgcagtggttg
cttgacctagttcacacggaccccataccttacatcaggcacaagattctcagcatgatg
atccgcgtgccgccgtttgcccgcggttcggactcgccgctgtgtagcgaggcgttggtg
gataatctctggaagctcatgaactcaggtacacaagctcgcgcatgcaaataa
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