KEGG   Petromyzon marinus (sea lamprey): 116942610
Entry
116942610         CDS       T09614                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor
  KO
K14298  mRNA export factor
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116942610 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmrn03019]
    116942610 (RAE1)
   03036 Chromosome and associated proteins [BR:pmrn03036]
    116942610 (RAE1)
Messenger RNA biogenesis [BR:pmrn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     116942610 (RAE1)
Chromosome and associated proteins [BR:pmrn03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    116942610 (RAE1)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd ANAPC4_WD40 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_Nup120_160 WD40_MABP1-WDR62_2nd NBCH_WD40 B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 116942610
NCBI-ProteinID: XP_032810617
UniProt: A0AAJ7T5N1
LinkDB
Position
15:complement(4966486..4976182)
AA seq 366 aa
MSLFGTSTGFGGNTMFGNAATDNHNPMKDIEVTSPPDDSISCLSFSPAALPGNYLIAGSW
ANDVRCWEVQDSGQTIPKAQQMHTGPILDVCWSDDGTKVFTASSDKTAKMWDLNSNQAIQ
VAQHDGPIKTIHWIKAPSYSCIMTGSWDKSLKFWDTRTPNPLLTIQLPERCYCADVVYPM
AVVATAERGLVVYQLENQPSEYKRIDSPLKHQHRCVAIFMDKQNKPTGFALGSIEGRVAI
QYIQPANPAKDNFTFKCHRSNGQTGPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA
RTKLKTSEQLDQPITACSINNNGNIFAYSSSYDWSKGHEYYSPQKKNYIFLRSATEELKP
RTKKGI
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgagtctgtttggcaccagcacggggtttggaggaaacacgatgtttggaaacgcggct
acggacaaccacaacccaatgaaggacatcgaggtgacttctccgccagatgacagcatc
agctgcttgtcgttcagcccagccgctctgcccggaaactacctcatcgcgggttcctgg
gcgaatgatgttcgctgctgggaagtgcaggacagtggacagaccattcccaaggcccag
cagatgcacacagggcccatactggacgtctgctggagtgacgatggaacgaaagtgttt
actgcgtccagtgacaagacggccaagatgtgggatctgaacagcaatcaggctatccag
gttgcacagcatgatggtccaataaagacaatacattggatcaaggcaccaagctatagc
tgcattatgacaggcagctgggataagagcttaaagttctgggacacgcgcactccaaac
cccttgctcaccattcagctgccagagaggtgctactgcgctgatgtggtttaccccatg
gctgtggtggcaacagccgagcgtgggctcgtggtgtatcagctcgagaaccagccctca
gaatacaaacgcatcgactccccattaaaacaccagcatcgctgtgtggctattttcatg
gacaagcagaacaagccgacgggatttgcactgggcagcatcgagggcagagtagccatc
cagtacatccagcccgccaaccctgccaaagataacttcacattcaagtgccatcgctcc
aatggtcaaacgggtccccaggatatttatgcggtcaacggaattgcattccacccagtg
cacggcacgctagccacggtgggctccgacggccgcttcagcttctgggacaaggacgcg
cggaccaagctgaaaacctccgagcagctggaccagcccatcacggcctgctccatcaac
aacaacggcaacatcttcgcctattcctccagctacgactggtccaagggtcatgagtac
tacagcccacagaagaagaactacatcttccttaggagtgccacggaggagttgaagccc
agaacaaaaaaggggatttga

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