Petromyzon marinus (sea lamprey): 116942617
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Entry
116942617 CDS
T09614
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmrn00535
]
116942617 (COL14A1)
Proteoglycans [BR:
pmrn00535
]
Extracellular matrix (ECM) proteoglycans
Others
116942617 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
VWA_2
Collagen
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Copine
Motif
Other DBs
NCBI-GeneID:
116942617
NCBI-ProteinID:
XP_032810631
UniProt:
A0AAJ7T5S5
LinkDB
All DBs
Position
15:complement(5146989..5251029)
Genome browser
AA seq
2462 aa
AA seq
DB search
MMRVDVSLLVTAALVASLSVCVIHSQVLAPKNLRFKFLKDNNVQMVWKAPAGKISGYKIV
IAPAPDGAGPSKELKLPKGATKTVLKDFRAGTEYVVTMVAYDGSAESPPIVGKVTIEAKT
TKTTAKKTSKKPPRKNEDRSSSDGCVPGTAADLVFVVDGSWSVGRVNFEKVKGFMASLVQ
ALVRAASSSSSSSSSEEEEESSEEADSDSGGSGVRVGIVQYSTDARTEFLPNEHTDADKL
IEAIRRLPYKGGSTNTGDALQFAQRVMFAEGAGTRDGIPKIAFVITDGKSQDAVAAPAQQ
LRSAGIEIFTLGIKEADVSELQEMASAPLERHLFNVASFDDVKDVQGEIISHVCQGVKLQ
MTVAQEGESLSAGRKRMDLQVSDISTQGMLVSWPSIAGATSYQLALRTADGLSYGDYIIA
AAATSSQQQRLAKLRPDTTYLLSMRAVFPGGPGSETEAEATTAELSGLLVTQETPSSFRV
SWPHQKPSARRLRLSYRPAAGGKATELALPPGASSALVRKLRHSTAYSVELTPVTAAGDG
PTLMATATTLEAAKFKPPKNLRVLEEGPEGLRMGWKAGPGKVSGYRVHYAPQGDEDAYGE
VTLGPDDTSVLLRDLRPGTAYSVNVHAEMQGGGESAALEALVTTSEYEAVTAQTPTGRFE
CSSQAQVDLVIVLDGSWSIGRINFRLVRVFLEQLVQAFDVRADKIRVALSQYSGDTRTEW
DLNTHTTKAALLEAVRSLPYKGGNTNTGMALEHARLQNLRPEAGARPGVPAIVILITDGK
SQDEVAKPAAELKSQGVELFAIGVKNADEQELRAIASTPVATHVHQASEFTGMAAIVEGL
TRVVCSRADLLFTALRGEGDGGVAVLPPSGLSTSDVTAGGFRVNWKQSAGPVSGYRVVYW
PHVGGPQEEVLVGGSESSALLQNLQPETQYRLHVTALSIGGASGNSSQITETTLSIPDLR
VYDVTTSSMRVQWEEAEGATGYTLTYAPVGGDEDDDGDKEEKLGPEVTDFLLDGLDASTE
YVMTLYAMYDDEIGEPLTAQETTLPLHSPAGGVRLSEVTHNSMRVAWDAPSTRVKKYRML
YEREDGTGAIEEDIRANVTSAVLKGLKSNTAYLVTVFSVFEDGQSEPLSGRGTTLKNPTP
QSLRFSDVGEKSVRVSWNAAALDVTMYRVRFTASPSDRTQELVLGGDQTSVLLEKLLPQT
PYEVTVAAVHADEAESSPLSGRVTTGDKSSVLTYTSAPRIPGGPQGPRNMVFSDETTMSI
EVTWEPAEGPVTSYRVTYEPTRRTQREEMVLVPARSNSVVLQPLAPSTSYKVTVTALYSD
GDGASIAGIGRTSVAAGYAPPNNFRVVDEWYNRFRITWDPPTTPPMGYRIVYQPVEGGQA
YETVVGDGVNAVVMQNLASGTEYLVRIYATYPGGASQPLQGRGRTLYLGIDDLYASSVEA
NSFCVQWNPHRDATSYRVTLESLRGEQPMQDFKLGRGVTTHCLDNLLPGVQYRAKVYARY
RDMEGPPASVLQSIDPGVGMPFYPQAIPTAAPTPPPIRQVCTSAKADLVFLVDSSWSIGE
ENFQKLISFVHGIVSSFERIGPSASQVALVVYSDNPRTEFDLNEYENQKEVLGALSSVRY
LGGNTKTGRGLKHVQKELFSSTGGMRKAVPKALILITDGRSQDDVTKTAQELRASGYSIF
AVGIADADMSEMHQVASRPSEKHVYFAEDFDSFRKIENQIMSHLCQVASIPCPIVFMNGY
TVPGFRMMEAFGLVEKTYASLGGVSMQPGSFNEFAAYRLQKGALLKVPTSEVHPEGLPPE
FTVSFLLRVLPETGTEPFSVWELTNQRLKPELGVQLDPGRQSVTLFGLDEAGKMQNIAFT
GPEVKTIFYGSFHKVHVAVTKSEVRLFIDCSLVASRPMRPFSNYSTDGFELLGHVAKTAG
NKVTSADFQLQMLDMVCNADWGTMDKCCELPSLRVEDSCPSLPHACSCSQDSKGPPGPPG
PLGSPGPKGPRGHPGSPGTQGGAGLRGEQGPRGPPGQRGPQGPSGISIPGTPGGPGDKGE
RGHPGQPGPPGPVGPVGPSGRSGSEGPRGPPGKDGERGPAGPPGLMGPQGPGGMDGIMGK
PGPRGPSGDPGLQGIKGEPGERGDTQGQQVVRMIARQVCENLLNGHMTRISSIINQMPNN
NNGGGRGTPGPPGESGRAGARGPPGETGPMGRPGFPGPSGTPGLRGERGVPGEKGERGNP
GTGTRGPPGPPGPPGVEGIGREGSMGPVGPSGQRGRDGVPGTRGQSGPPGPPGYCDPSQC
GGGGGYGVAGGYDRRTESGEPEAPAFPVTGYNPYSPYGQPQPYQPEPYQPEPYQPEPYQP
EPYQPESYGADTYGSQAYNSRAVGGGGGGGGGGGSSSSSSSSRVTSFTRTDAFEDGDGGG
GGGGGGGGSSRETVISRTVVQPRTYVSSSVRRFRVLEDGTEEELEGDEEEEEFFEDSRPP
RG
NT seq
7389 nt
NT seq
+upstream
nt +downstream
nt
atgatgagggtggacgtctccctcctcgtcaccgccgccttggtcgccagcctctccgtc
tgcgtcattcactcgcaagttttggcaccaaagaacctccgattcaagttcctgaaagac
aacaatgtgcagatggtgtggaaggctccggcggggaagatttccggatacaagatcgtg
atcgctccagcacccgacggtgctgggccgtccaaggagctgaagctgcccaagggagcc
accaagacggtgctgaaggatttccgcgccggcaccgagtacgtggtcaccatggtggcc
tacgacggctcggccgagagcccgcccatcgtggggaaagtgacgatcgaggccaagacg
accaaaaccaccgccaagaagacgtcgaaaaagccccccaggaagaacgaagaccgctca
tcttccgacggctgcgtccccggcaccgcggccgacctggttttcgtggtggacggcagc
tggagcgtcggccgcgtgaacttcgagaaggtcaagggcttcatggcgtccctggtgcag
gccctggtgcgtgccgcctcctcctcttcatcgtcgtcgtcgtcggaagaggaggaggag
tcctccgaggaggccgattctgactccggcggcagcggcgtccgtgtcggcatcgtgcag
tacagcacggacgcacgcactgagttcttgcccaacgaacacacggatgctgacaagctc
atagaggccatccggaggctcccctacaaagggggcagcaccaacaccggagacgcgctg
cagttcgcccagcgcgtgatgttcgcggagggcgcgggcacacgcgacggcattcccaag
atcgccttcgtcatcacggacgggaagtctcaggacgcagtggcggcacccgcccagcag
ctgcgcagcgcgggcatcgagattttcactctcggcatcaaggaggcggacgtctcggag
ttgcaggagatggcctccgctccgctggagcgccacctcttcaacgtggcgtccttcgac
gatgtcaaggacgtgcagggggagatcatctcgcacgtgtgccagggcgtgaagctgcag
atgaccgtcgcgcaagaaggggaatcgttgtccgcgggcaggaagcgcatggacctgcag
gtgagtgacatctccacgcaggggatgctggtgtcctggcccagcatcgccggcgccacc
tcctaccagctggcgctgcgcacggccgacggcctctcctacggcgactacatcatcgcc
gctgccgccacatcctcgcagcagcagcggctcgccaagctgaggcccgacaccacctac
ctgctgtccatgagggccgtcttccctggaggcccggggtccgagactgaggccgaggcc
actactgctgaactcagcggcctgctggtcacgcaggagaccccgtccagtttccgggtc
agctggccccaccagaagccgtcggcacgccgcctccgcctctcgtaccgcccggcggcc
gggggcaaggcgacggagctggcgctgccgcccggcgcctcttcggccctcgtgcgcaag
ctgcgccactcgacggcgtacagcgtggagctcacgcccgtcacggccgcgggggacggg
cccaccctcatggccactgccaccactttggaagctgccaagttcaagccgccgaagaac
ctgcgtgtgctggaggagggccctgagggcctgcgcatgggctggaaggctggccccggc
aaggtgtcggggtaccgggtccactacgcgccccagggagacgaggatgcctacggggag
gtgacgctggggcccgacgacacctccgtgctgctgcgcgacctccggcccggcacggcg
tacagcgtgaacgtgcacgccgagatgcagggcggcggggagagcgccgcactcgaggcg
ctggtcaccaccagcgagtacgaggcggtgaccgcgcagaccccgaccggccgcttcgag
tgcagctcgcaggcgcaggtggacctggtgatcgtgctcgacgggtcctggtccatcggg
cgcatcaacttccgcctggtgcgcgtcttcctggagcagctggtgcaggcgttcgatgtg
cgggccgacaagatccgcgtcgccctgtcccagtacagcggggacacgaggaccgaatgg
gacctcaacacgcacaccaccaaggcggcgctgctcgaggccgtccgcagcctcccctac
aagggcggcaacaccaacacaggaatggccctggagcacgcacgcctgcagaacctgagg
ccagaggccggcgctcgccccggggtgccggccatcgtgattctcatcaccgacgggaag
tcccaggacgaggtggccaagccggcggcggagctcaagagccagggggtggagctgttc
gccatcggtgtgaagaacgcggacgagcaggagctgcgggcgatcgcctcgacaccggtg
gccacgcacgtccaccaggcctccgagttcacggggatggcggccatcgtggaggggctc
acccgcgtcgtctgctcgcgcgccgacctcctcttcaccgcgctgcgaggggagggcgac
ggcggcgtggcagtgctgcccccgagtggcctctccacgtcggacgtgaccgccggcggc
ttccgcgtgaactggaagcaatccgcgggccccgtgtccggctaccgagtggtctactgg
ccgcacgtgggcggcccacaggaggaggttctggtcgggggttcggagagctcggcgctg
ctgcagaacctgcagccggagacgcagtaccggctgcacgtcacggcgctctccatcggc
ggagcctccggcaacagctcgcagatcaccgagaccacactgtccattcccgacctgcgc
gtgtacgacgtgacgacgagcagcatgcgcgtgcagtgggaggaggccgagggcgccacg
ggctacacgctcacctacgccccggtcggcggcgacgaggacgacgacggcgacaaggag
gagaagctgggcccggaggtgacggacttcctgctggacgggctggacgcgtcgacggag
tacgtgatgacgctgtacgccatgtacgacgacgagatcggcgagccgctcactgcgcag
gagaccactctgccgctgcactctccggccgggggcgtgcgactctcggaggtgacgcac
aacagcatgcgcgtggcctgggacgcgccgtcgacccgcgtcaagaaataccgcatgctg
tacgagcgggaggatggcactggcgccatcgaggaggacatccgggccaacgtgacgtcg
gccgtgctcaaggggctcaagtcgaacaccgcctacctcgtcaccgtcttctccgtgttc
gaggacggccagtcggagccgctgagcggccgcggcacgacactgaagaacccgactccg
cagtccctgcgcttctccgacgtgggagagaagagcgttcgcgtctcctggaacgcggcg
gcgctcgacgtcaccatgtaccgcgtccgcttcaccgcgtcgccctcggaccgcacccag
gagctggtgctgggtggggaccagacgtcggtgctgctggagaagctgctgccccagacg
ccgtacgaggtgactgtggcggcggtccacgccgacgaggctgaaagcagccccctgtcg
gggcgagtcacgaccggagacaagtcctctgtgctcacatacacgtccgctccccgcatt
ccaggtgggccccaggggccccggaacatggtgttctcggacgagacgacgatgagcatt
gaggtgacgtgggaaccggcggagggccccgtcacctcctaccgcgtcacgtacgagccc
acgcggcgtacgcagcgcgaggagatggtgctggtgccggcccgctccaactcggtggtc
ctgcagccgctggcgcccagcacgtcctacaaggtgacggtgacggcgctctacagcgac
ggcgacggcgccagcatcgccggcatcggccgcaccagtgttgcagccgggtacgcgccg
cccaacaatttccgggtggtggacgagtggtacaaccgcttccgcatcacgtgggaccca
cctacgacgcctcccatgggctaccgcatcgtctaccagcccgtcgagggtgggcaggcg
tacgagacggtggtgggcgacggcgtgaacgcggtggtgatgcagaacctggcgagcggc
accgagtacctcgtccgcatctacgccacctaccccggcggggcgagccagccgctgcag
ggccgcggacgcacgctgtacctgggcatcgacgacctgtacgcgtccagcgtggaggcg
aacagcttctgcgtgcagtggaacccccatcgcgacgccaccagctacagggtgacgctg
gagtccctgagaggggagcagccgatgcaggacttcaagctgggccgcggcgtcaccacc
cactgcctggacaacctgctccccggcgtgcagtaccgcgccaaggtgtacgcgcgctac
cgcgacatggaggggccccccgcctccgtgctgcagtccatcgatccgggcgtcgggatg
ccattctaccctcaggcgatccccaccgcagcgcccacgcctcctccgatacgccaagtg
tgcacctcggccaaggccgacctcgtcttcctggtggacagctcctggagcatcggcgag
gagaatttccagaagctcatctcgtttgtgcacggcatcgtgtcgtccttcgagaggatc
ggccccagcgcctcgcaggtggccctggtggtctacagcgacaacccgcgtacagagttc
gacctcaacgagtacgagaaccaaaaggaggtgctgggggctctcagttccgtgcggtac
ctgggcggaaataccaagactggccgcggcctcaagcacgtgcagaaggagctgttcagc
tccacgggggggatgcgcaaggccgtgcccaaggctctcatcctcatcacggacggccgc
tcgcaggacgacgttactaagacggcgcaagagctccgggccagcggctacagcatcttc
gcggtgggcatcgcggacgcggacatgagtgagatgcaccaggtggcaagccgccccagt
gagaagcacgtctacttcgccgaggactttgactccttccgcaagatcgagaaccagatc
atgtcgcacctgtgccaggtcgcgtccatcccgtgccccattgtcttcatgaacggctac
actgtaccaggcttccgcatgatggaggcctttggcctggtggagaagacctacgcgtcc
ctgggaggcgtctccatgcagcccggctccttcaacgagttcgccgcttaccgcctgcag
aagggggccctgctcaaggtgcccacaagcgaggtgcaccccgaggggctgccccccgag
ttcaccgtgtccttcctgctgcgcgtgctgcccgagactggcacggagccgttctccgtg
tgggagctcaccaaccagcgcctcaagcccgagctgggggtgcagctcgaccccgggagg
cagtccgtgacgctcttcgggctcgacgaggccggaaagatgcagaacatcgccttcaca
gggccagaggtcaagaccatcttctacgggagcttccacaaggtgcacgtggcggtgacc
aagtcggaggttcgtctcttcatcgactgctcgctggtggcgtcgcgccccatgcgcccc
ttctccaactactccaccgacggctttgagctgctgggtcacgtcgcaaagaccgccggg
aacaaagtcacctcggcagacttccagttgcagatgttggacatggtttgcaacgcggac
tggggtacaatggacaagtgctgtgagctgccgtcgctgagagtggaggactcgtgccca
tcgctgccccacgcgtgctcctgctcccaggacagcaaggggccacccggccccccgggc
cccctcggcagccctggccccaagggaccccgtgggcacccagggtccccaggaactcag
ggtggagctgggctacgtggagagcaggggccgaggggaccgcctggacagaggggaccc
caagggcccagcgggatctctattcctggaacccctggcggtccgggagacaagggcgag
aggggccaccctggccaaccaggacccccgggtcccgtgggtccagtggggccttctggc
cgctcgggatcggagggccccaggggcccgccgggaaaagatggggagagggggccggcc
ggaccccccggcctcatgggccctcaagggcctggcggcatggacgggatcatggggaaa
ccgggcccacgcggaccatcgggagacccgggcttgcagggtatcaagggagagccagga
gagaggggcgacacgcaaggccagcaagttgtgcgcatgatcgcgcggcaagtttgcgag
aacctcctcaacggccacatgacccgcatcagcagcatcatcaaccagatgcccaacaac
aacaacggcggtggccgcgggacgccggggccacccggggagtccggccgagctggggcg
cggggcccgcccggagagacggggcccatgggccggcccggcttccctgggccgtccggc
acgccgggcctccgcggggagagaggtgtgcccggggagaagggggagaggggaaaccct
ggcacgggaacacgtggacccccaggacctcccggcccgccaggtgtcgagggcatcggt
cgcgagggcagcatgggcccggtggggccttccgggcagcggggccgggacggggtgccc
ggcacgaggggtcagtcggggccgccggggccgcccggctactgcgacccgtcgcagtgc
ggcggcggcgggggctacggcgtggccggtggatacgaccgacggacggaatccggggag
ccagaagccccggcgtttcccgtcaccggctacaacccttacagcccgtacggccagccg
cagccctaccagccggagccctaccagcctgagccctaccagccggagccgtaccagccg
gagccgtaccagccggagtcgtacggagccgacacatatggctcgcaggcctacaacagc
agagcggtgggcggcggcggcggcggtggtggtggcggcggtagcagcagcagcagcagc
agcagccgcgtcaccagcttcacccgaacggacgcgttcgaagatggcgatggtggcgga
ggtggtggcggaggtggtggcggcagtagccgggagacggtcatctcgcgcaccgtggtg
cagccgcgcacctacgtatcgtcgagcgtgcgccgattccgggtgctcgaggatggcacc
gaggaggagctggagggagacgaggaggaggaggagttctttgaggattcgagacctccc
cgcggttga
DBGET
integrated database retrieval system
