Petromyzon marinus (sea lamprey): 116942703
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Entry
116942703 CDS
T09614
Name
(RefSeq) M-protein, striated muscle-like isoform X1
KO
K24495
myomesin
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116942703
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
116942703
Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
116942703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
ig
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Tissue_fac
V-set
Ig_J_second
Herpes_gE_N
Motif
Other DBs
NCBI-GeneID:
116942703
NCBI-ProteinID:
XP_032810852
UniProt:
A0AAJ7T407
LinkDB
All DBs
Position
15:13454630..13524228
Genome browser
AA seq
1569 aa
AA seq
DB search
METTAALPFYQKRHEHFDRSYRYAETRSIMQKYLRKDKKRLEDDAESKGAFVQRSSVLSR
QEQEVSQKHRESLHLTRSHKQQQQQQQLQVSSSQQQQQQQQQHIKSSFKHREVEGMHLQH
QQQQQVKGLHRQLDSGSHLVHDDSSHQHHLQQQQQHHHLQQQQYQQQQQQHQYHHHQQQQ
YHQHHQQHHVVEVCLDCHEKKLREQQQEVIGNGLGVAQGYKVGDAQGYGKQQGVHAWCVD
DAVEDEELEEIARTVRSSRKEIRKKAAQLALRRKILDSEEYQERVRDDKVQHSPEFLMKP
RSHVVWEKSTARFNCTVQGRPTPHVKWFKNNKPIDVHREPGKFRISSNYGVHALEINWCS
EDDTAQYRVSAISTRGETSCFATLVVKRFRSEFDETSFYSGISTFPFDLPLLPTVSGLEL
DVRIMEKFGVTFGREGETLSLCCTVVVVPNLHKARVEIQWFRDDVRLEESKWVQLYWSGE
KATLVLAHLNKEDEGLYTVRVVTTGGAARHSAYVFVRDAAAEIAGAPPAPLGVEIHDPNR
NYVIVSWKPPSGQGGSPITGYFVERREVNTEKWVSCNDAPVLYARWVAAGLVECHSYQFR
VRAVNSAGLSLPSRPSEPVIALHPDEAAKLKGTPAAPWTGQIFVTEEEPTDAMVPSCPQE
VAVTEISRSYAVLGWKVPVSPGSEAVTYYVEKSTDGGESWERLNGGVAVKSTHFAALGLV
EGKSYQFRVLACNSTGLSEPSEETLPVTAHDKLIPPSAPESVTPEKDSATSVLLNWKEVA
DTQGLLGYYTESRACDSKEWQISNNNPVKRNNFVVHGLKTGGEYVFRVRGVNAAGFSSFS
KESAPFKVEAPVDLPTSGHQPPTPEPASRVSLHEAAKSAPAAGKSVGQPAAASVRAGSPH
PTAPPPSKISLLNCSGVGMVLHWQPPAPGKAPLATGYRVEARAVPEGGSDSPGEWHDAKA
RRIEDTVYEVQGLAEHSSYQFRVSAENPGGLGCPSEPSQTFPCEKWTFPEPGPPFGLAFS
DIKDGAMVVSWKPPLYAGTSAVSLYHVELTEADAVSWRRSDEKPSASTHVKVGGLKDGQP
YLFRVFAENAGGRGKMSEEYGPVVARGLAVRPEASKPKEQKSKKGKPTSLKSPLAVEVQD
NGTVRFSAQLEDLSASADVKCIFDDKEIEKNEKYDIKVDVATGLVEVLVETITAEDEGSY
SVVFKEDDGKENASNLPLLGDDFKKLLEQSEKAKRDWKRKQGPYVVEQAHWEVMEDCNVR
LICKVSNIKKQTSAVWFKDGKQIMVDEKHDFKDGIISLHIAKITKRDAGVYKLQLKDERG
DDSSVLQFTGKTFDQAIKEVCKMIVKSAAPLKAQATEEGVRIHSTVKHCLPEVKSVWFHA
ESKLTKSERLEFGSSDTELWMKMKAPVDKDKGTYRLEATGNTETVKLSIDLSGKAFAGLL
EEYQKLELAANADKNNARIVGGLPDVVSIMEGKTLNLTCSVAGEPVPEATWLKHDKVLSK
SEHYIINFEEGRFANLIIQNITMADTGKYGIVVTNKYGKDTADFTVSVYKEGKEIEETSK
KPKYSHSRK
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaccgccgctcttcccttctaccagaaacggcacgagcacttcgaccggagc
taccgctacgcggagacgcgcagcatcatgcagaagtacctgcgaaaggacaagaagcgc
cttgaagatgacgccgagtccaaaggcgccttcgtgcagcggagcagcgtcctgagtcgc
caggagcaggaggtcagccagaagcaccgggagagcctccacttgacgaggagccacaag
cagcagcagcagcagcagcagctgcaagtctccagcagccaacagcagcagcagcagcag
cagcagcacatcaagagcagcttcaagcaccgggaagtcgaggggatgcacctgcagcac
cagcagcagcagcaggtgaaagggctgcatcggcagctcgacagcgggagccacttggtc
catgatgatagcagccatcagcatcatcttcagcagcagcagcagcatcatcatcttcag
cagcagcagtatcagcagcagcagcagcagcatcagtatcatcatcaccagcagcagcag
tatcatcagcatcatcagcagcaccatgtggtggaggtgtgtcttgattgtcatgagaag
aagctgcgtgagcagcagcaagaggtgatcgggaacgggctgggggtcgcgcaggggtac
aaggtgggggacgcgcaggggtacgggaagcaacagggcgtccacgcgtggtgcgtggat
gacgctgtggaggacgaggagctggaggagatcgcccgcaccgtcagatcgtcccgcaag
gagatccgcaagaaagccgcccagctcgctctgcgcaggaagatcctggacagcgaggag
taccaggagcgcgtgcgggatgacaaggtgcagcactcgcccgagtttctcatgaagccg
cggtcgcacgtcgtctgggagaagtcgaccgcgcgcttcaactgcacggtgcagggcagg
cccacaccccacgtcaagtggttcaagaacaacaagcccatcgatgtgcaccgcgagccg
ggaaagttccgcatcagcagcaactacggcgtccacgcgctggagatcaactggtgcagc
gaggatgacacggctcagtaccgcgtctcggccattagcaccagaggagaaacgtcctgc
tttgccactctggttgtgaaaagattcaggagcgagtttgacgagaccagcttctactcc
gggatctccactttccccttcgacttgccgctcctgcccacggtgtcagggctggagttg
gacgtgcgcatcatggagaagtttggcgtcacgttcggccgggagggagagacgctgtcc
ctgtgctgcaccgtcgtggtcgtgccaaacttgcacaaggctcgcgtggaaattcagtgg
ttccgtgatgatgtgcggctggaggagtccaagtgggtgcagctgtactggagtggggag
aaggccacgctggtgctggcccacctcaacaaggaggacgaggggctctacacagtgcga
gtcgtcaccaccggaggcgccgctcggcactccgcctacgtcttcgtgcgcgatgcggca
gctgaaattgctggtgcacctcctgctccgcttggcgtggagatccacgacccgaaccgc
aactacgtcatcgtctcatggaagcctcccagtggccaaggaggcagccccatcaccggc
tactttgtggaaaggcgcgaggtgaacacggaaaagtgggtgagctgcaacgacgcgccg
gtgctgtacgcgcgctgggtggcggccggtctcgtcgagtgccactcgtaccagttccgc
gtgcgcgccgtcaactcggccggcctgagtctcccgtcgcggccctcggagcccgtcatc
gctctgcacccggacgaggccgccaagctcaagggaacccctgctgccccatggactgga
caaatctttgtgaccgaagaggagccgaccgacgcgatggtgccgagctgcccgcaggag
gtggcggtcaccgagatcagccgcagctacgcggtgctcggctggaaagtgccggtctcc
cccggctccgaggccgtcacctactatgtggagaagtcgacggacggaggggagtcgtgg
gagcggctcaatggaggcgtcgcggtcaagtcgacgcactttgcggcactcgggctggtg
gaggggaagagctaccagttccgcgtgctggcctgcaactccaccggcctgagcgagccc
tccgaggagacgctgcccgtcacggcccacgacaaactgattccgccctcggccccggag
agcgtgacccctgagaaggactcagccacctcggtgctgctgaactggaaggaggtggcc
gacacccaggggctgctgggatactacacggagtctcgcgcctgcgactccaaggagtgg
caaatcagcaacaacaaccctgtcaagcgcaacaactttgtggtgcacgggctgaagacg
ggcggcgagtacgtgttccgcgtccggggtgtcaacgccgccggtttcagcagcttctcc
aaggagtcggcacccttcaaggtggaggcacctgtggacttgcccacgagtgggcatcag
ccgccgacccctgagccggcttcacgagtgagtttgcatgaggctgctaaatctgctcct
gccgccgggaagagcgttggtcaacctgcggctgcgagtgtccgcgccggctccccgcac
cccaccgctccgccgccgagcaagatctcgctgctgaactgctccggcgtcggcatggtg
ctgcactggcaaccgcccgcccctggcaaggcgccgctcgccacgggctaccgcgtggag
gcgcgtgccgtgcccgagggagggagtgattccccgggcgaatggcacgatgccaaggcg
agacggatcgaggacacggtgtatgaggttcagggcctggcggagcacagcagctaccag
ttccgcgtgagtgcggagaacccgggggggttgggctgcccgtcggagcccagccagacc
ttcccgtgcgagaagtggaccttccccgagcccggtcctccgtttggcctggccttctcg
gacataaaggacggcgcgatggtggtgtcgtggaagcctccgctgtacgccgggacctcg
gccgtgtccctctaccacgtggagctcacggaggccgacgccgtcagctggagacgctcg
gacgagaagccctccgccagcacgcacgtcaaggtgggaggcctcaaggacggacaaccg
tacctcttccgtgtgtttgcggagaacgcgggaggccgtgggaagatgtcggaagagtat
gggcccgtggtggctcgtggcttggcagtacgtccagaggccagcaagcctaaggagcag
aagagtaagaagggcaaacctacctcgctgaagtcccctcttgccgtggaggttcaggac
aacgggaccgtgcggttctcggctcagttggaagacctgtccgcgtccgccgacgtcaag
tgtatcttcgacgacaaagagattgagaagaacgagaagtatgacatcaaggtggacgtg
gccacggggctggtggaggtcctcgtggagaccatcactgccgaggatgagggctcctac
agcgtcgtcttcaaggaggacgacggcaaggagaatgcgagcaacttaccgctgctgggc
gatgatttcaaaaagcttctggagcaatcggagaaggcaaagagagactggaagaggaag
caagggccttacgtggtggagcaggctcactgggaggtcatggaggactgtaacgtgcgt
ctcatctgcaaggtgtcgaacatcaagaagcagacgagcgccgtgtggttcaaggacgga
aagcagatcatggtggatgagaagcacgactttaaggatggaatcatctctctgcacatc
gccaagatcaccaagcgagacgccggggtgtacaagctgcagctgaaggacgagcgaggg
gacgactcgagcgtcctgcagttcaccggcaagacttttgatcaagccattaaggaagtc
tgcaaaatgattgtcaagtcggccgcaccactgaaagctcaggccacagaggagggagtc
cgcattcattccaccgtcaagcactgcctccccgaggtgaagagcgtctggttccacgcg
gagagcaagctcaccaagtcggagcggcttgagttcggcagctcggacacggagctgtgg
atgaagatgaaagctcccgtcgacaaggacaagggcacgtacaggctggaggccacaggc
aacaccgagacggtcaaactctccatcgacctctccgggaaagccttcgctggcttgctg
gaagagtaccagaagctcgagcttgctgctaatgcagataaaaacaatgccaggatcgta
ggagggttgcctgatgttgtcagcattatggaaggaaagacgttgaacctgacctgttcc
gtggcgggggagccggtgccagaggccacgtggctgaaacacgacaaagtgctctccaag
agcgagcactacatcattaatttcgaagaggggcgtttcgcgaacctcatcatccagaac
atcacgatggccgacacggggaagtatggcatcgtagtgacgaacaagtatggcaaggac
accgccgacttcaccgtaagtgtctacaaggagggaaaggagattgaggaaacttcaaaa
aagcccaagtactcgcacagcagaaagtag
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integrated database retrieval system
