Petromyzon marinus (sea lamprey): 116942766 Help Entry 116942766         CDS       T09614                                  Name (RefSeq) protocadherin-9-like isoform X1   KO K16498   protocadherin delta 1 Organism pmrn  Petromyzon marinus (sea lamprey) Pathway pmrn03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:pmrn00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     116942766  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:pmrn01009]     116942766   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:pmrn04515]     116942766 Protein phosphatases and associated proteins [BR:pmrn01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      116942766 Cell adhesion molecules [BR:pmrn04515]  Cadherins   Protocadherins    116942766 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_2 Cadherin_CELSR2_9th Motif Other DBs NCBI-GeneID:  116942766 NCBI-ProteinID:  XP_032810913 UniProt:  A0AAJ7T419 LinkDB All DBs Position 16:11835038..11902232 Genome browser AA seq 1517 aa AA seqDB search MLQPRFGKSTSLPRWTGTESGDQRPVMASGCGAWAARPGWLPPLLVPPLLLLLSTLSSAE EFKVSYRVAEELREGAFIGNPSVDLRLADYNLELTYKVMLSKAEDAAPPLVRVNPRTGEL FAAGRKMDREALCGGQDPGDECHVDVQVGVLPVQPGPFFKLIEVRINVEDINDNAPAFAA PVLTVSVPENAPAGKRFPIQPANDPDSEANGVRRYELLPSDPATVSAFELSVTETANGEK VPYLVVRKSLDREERQLYEMNLRAVDGGSPPHSGSAVLRINVTDTNDNSPVFDQAEVNVE IPENSPVGTHVVQLHASDRDAGSNAEVVYRLGTSTGGAGSGQGGKRLFRLDQNSGLVTVN GLLNREESPVYRIIILATDKGPEPVPATATVTVTVTDVNDNSPTIEIRDIVAPVNGVIYI SEASHVNLPVALITVSDPDIGANGAVTCYIYNPEVPFQLKKLTYPNQYLLETRETLDYET KNEYVVQIKAADAGATSLSRTMSVTIKLLDSNDNAPVFTEPTYKVSVPENNVIGKHLITV SATDRDMDKNAEMVYFLGPDAPTMFHMDPETGIISLTEQLDREKKANYSFTILAKDQGIP VLEGNATVIVNVLDVNDNRPRFSLAEFDFYVNENVPKHSTVGMVTVADSDEGENGRVRLS ILGTDNRQLFSIDPESGMIRSNVGFDREQRHYYVLEVQATDGGEPVRSSTVKVVIHVMDI NDNSPIVLMPPSNTTYKFVVPRTLPGTIVTEVSAVDNDAEINAELRYHIVGGNPHNLFHI DPVIGNITLMEPLTETHHGLHRLVVRVSDIGIAVQHHAVALVHVFVNETLENATYIEWLI AGSLQTPLDTDVAGFGRREQEDNKVLLLAAVLAGVLGVALIVLLGVLVHRCYCNRRKGGG GGIVRAKHGGQEWLSPTQEKKHSNGGKNNKKSDNRKKKKHANGAPFSIAIEASKNSEDPT YQTINEAMSWGHESDAPSPIYGLGGGGGGGDGVATTFKPGSSSATVGGSGGGGGGGGGGG GGSNGGGGGGSESPDLARHYRSTSPVTPVSLPQATQQTPTAGKKYGVIQELPVANTFVGS GGSGVGGVGGAGNGACAGGGNGGNDCMSSKRSSISSEHYSHSETECSSQSGGNNSSGGGG GGGGCGGGGGGNNKGGGQRYNRQPQRRVKFTLDGECYGSSQQSCADSGLGDTSDGGPPLG PAMAYRPGGITGAAMELGSGHAGSGGGAEHGPGLPGGGGGCCYYQLTPLTDEGHERSTPD GSIGEIEHLEHGCTAPMLPKDLPDVTVIASRCTSDCQRYGHSDLCWMPPEPETALLLDKS MPAAPTQHVPISRARLPAVNAVPLSAAAVASNPSAADLGTNARGVQHPAPPFSTFMGPTR ERASSRTPTPAVSPTSSNTAPSVPAAAAAAATGPSDEHAPQGNLWEDRNRNHLLLRQAAY AAGLGGGPGIGMAAFRQLSDGDGGKEKEAIPLTATGSSQPPPATPGSGSNSSSSANPATK YKQATVSIAPYSREHYL NT seq 4554 nt NT seq  +upstreamnt  +downstreamnt atgctccagccgaggttcggaaagtcgacgagcctcccccgctggaccggaactgaaagc ggcgaccagcggccggtcatggccagcgggtgcggggcgtgggcggcacgccccggctgg ctgccgccgctgctggtgccgccgctgctgctcctgctgtccacgctgtcgagcgccgag gagttcaaagtgagctaccgggtcgccgaggagctacgtgagggcgcttttataggcaac ccgagcgtcgacctccgcctggcggactacaacctcgagctgacctacaaggtgatgttg tccaaagccgaggacgcggcgcccccgctggtgcgagttaacccgcgcacgggggagctc ttcgccgcggggcgcaagatggacagggaggcgctgtgcgggggtcaggaccccggcgac gagtgccacgtggacgtgcaggtgggcgtcttgcccgtgcagcccgggcccttcttcaag ctcatcgaggtgcgcatcaacgtggaggacatcaacgacaacgcgccggccttcgcggcg cccgtgctcaccgtgtccgtgccggagaacgcgccggcggggaagcgtttcccgatacag ccggccaacgaccccgacagcgaggccaacggcgtgcgccgctacgagctgctgcccagc gacccggcgacggtcagcgccttcgagctgagcgtcaccgagacggccaatggcgagaaa gtgccttacctggtggtgcgcaagagcctggaccgcgaggagcggcagctgtacgagatg aacctgcgtgccgtggacgggggctcgccgccccactcgggctccgccgtgctgcgcatc aacgtcaccgacaccaacgacaacagccccgtgttcgaccaggcggaggtgaacgtggag atccccgagaactcgccggtggggacccacgtggtgcagctgcacgcctccgaccgcgac gcgggctcgaacgccgaggtggtgtaccgcctcggcacgagcacaggcggagccgggtcg ggccagggcggaaagcgcctcttccgcctcgaccagaacagcggactggtgacggtcaat gggctcctcaatcgcgaagagagccccgtttaccgcattatcattctggccaccgacaaa gggcccgagcccgtgccagcgacagccaccgtgacggtgaccgttaccgatgtaaacgac aactcgcccaccatcgagataagggacatcgttgcacctgtcaacggcgtgatctacatc tcggaggcgtcgcacgtcaatctccctgtggcacttatcacggtttcagacccagacatc ggtgccaatggtgcagtgacgtgctacatctacaatccggaagttccttttcagctcaaa aagttaacctacccaaaccagtacctactggagacacgggagactctggattacgagaca aagaatgagtacgtggtgcagataaaggcagccgacgcaggagcgacgagcctttctcgg acaatgtcggtcacaatcaagttgcttgacagcaatgataatgccccggtgtttacagag ccaacatacaaggtatccgtccctgagaacaacgtgattggaaaacacctgatcactgtc agcgccactgacagagacatggacaaaaatgcagagatggtttactttttgggaccagat gcacccacgatgtttcacatggacccagaaacgggcatcatttctcttaccgagcagctg gacagggaaaaaaaggcgaattactctttcaccatcctggctaaggaccagggtatacca gtgttggagggcaatgcgaccgtcatcgtgaatgtcctcgacgtgaacgacaacaggcct cgattcagcctggccgagtttgacttctacgtgaacgagaatgtgcccaagcacagcacc gttggcatggtgacggtggccgactcggacgaaggggagaacggacgcgtccgcctctcc atcctcggcacggacaatcggcagctcttcagcatcgacccggaatccggcatgatccgc tcaaacgtgggcttcgacagggagcagaggcactactacgtgctggaggtgcaggcgaca gacggaggggagcctgtgaggtcctccacggtcaaggtggtcatacacgtcatggacatc aacgacaactcgcccatcgtgctcatgccgccttccaacaccacgtacaagttcgtcgtg ccgcgcacgctgcccggcacgatcgtgacggaggtttctgccgtcgacaacgacgccgag atcaacgcggagctgcggtaccacatcgtcggcgggaacccgcacaatttgttccacatc gaccccgtgatcggaaacatcacgctgatggagcccctgacggagacgcaccacggcctg caccggctggtggtgcgcgtgagtgacatcgggatcgcggtgcagcatcacgccgtggcc ttggtgcacgtgtttgtcaacgagacgctggagaatgccacgtacatagagtggctgatt gccggcagcctgcagacacctctggacacggacgtcgctggctttggcaggcgggagcaa gaggacaataaggtgctgcttttggcagccgtgttggccggggtcctgggagttgccctc atcgtgttgctgggcgtcctggtgcaccgctgctattgcaaccggcgcaagggcgggggt gggggcatcgtgagggccaagcacggtgggcaagagtggctctccccgacgcaggagaaa aagcacagcaacggcggcaaaaataacaagaagtcggacaacaggaaaaaaaagaagcac gcgaacggcgctccgttcagcatagcgatcgaagcgagcaaaaattccgaagacccaacg tatcagacgattaacgaggccatgagttgggggcacgagtccgatgcccccagccccatc tacggcctcggtggcggaggaggcggtggcgacggggtggccacgaccttcaagcccggc tcgagcagcgccaccgttggcggcagcggaggaggaggaggaggaggagggggaggagga ggagggagcaacggcggaggcggcggcgggtccgagagccccgacctggcgcggcactac cgctcgacctcgcccgtcacgcccgttagcctcccccaagccacgcagcagactcccacc gcggggaaaaagtacggcgtcatccaggagctcccagtggccaacacgttcgtgggcagc ggcggaagcggcgtcggcggcgtcggcggcgctgggaacggggcctgcgccggcggaggc aacgggggaaacgactgcatgtcgtccaaacgctcgtccatcagctcggagcactacagc cactcggagacggagtgcagctcgcagagcggtgggaacaacagcagcggcggcggtggc ggcggtggcggctgcggcggtggcggcggtggcaacaacaaaggcgggggtcagcgctac aacagacagccccagcgccgtgtgaaattcaccctggacggggagtgctacggatcgtcg cagcagagctgcgccgacagcggcctcggtgacacgtccgacggcgggcctccgctgggg ccggccatggcctaccggccgggcggcatcacgggagccgccatggagctcggctcgggt cacgcgggctccgggggaggggccgagcacggccccggtctcccggggggaggaggcggc tgctgctactaccagctgacgccgctcacggacgaagggcacgagaggagcacccccgac ggcagcatcggggagattgagcacctggagcacggctgcacagccccaatgcttcccaag gacctgcctgatgtgactgtgatcgcgtcgcgttgcacgtccgactgccagcgctacggc cactccgacttgtgctggatgcccccggagcccgagaccgctctactgctcgacaagtcc atgccagccgctcccacccagcacgtgcccatctcccgtgcccgcttgcccgccgtcaac gccgtcccactgagcgcggccgccgtggcctccaaccctagcgccgccgaccttggcacc aacgcccgaggcgtccagcacccggcaccgccgttctccaccttcatgggtcccacgcga gagcgggcctccagccgtacccccaccccggccgtgtcccccacctcgtccaacaccgct ccatccgtcccagctgctgctgctgctgctgccactggcccgtccgatgagcacgcgcca caggggaacctctgggaggaccgaaaccgaaaccacctgctactgcgacaggctgcatac gccgcgggtctcgggggtggccctggcattggcatggccgccttcaggcagctttcagat ggtgacggtgggaaagaaaaggaggccatccctctgacggccacggggtcttctcagcct cctccggccacaccgggcagtggtagcaacagcagcagcagcgccaacccggctaccaag tataagcaggccaccgtgtcaattgccccgtacagccgtgagcactacctgtaa

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