Petromyzon marinus (sea lamprey): 116942784
Help
Entry
116942784 CDS
T09614
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116942784 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116942784 (FIP1L1)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116942784 (FIP1L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
116942784
NCBI-ProteinID:
XP_032810933
LinkDB
All DBs
Position
16:4946582..5001158
Genome browser
AA seq
753 aa
AA seq
DB search
MAAEVGDAAGDAVGLGGEDEEQWLYGDEDATDKAEGEPATVGPPADVPAAAADDKGGDLP
LNGNADETNGDGTEAAPAPNGTEDAEDDSDSDSDDDDVQVTIGDIKTGAPQYTGVNPEYQ
ARCTAVWGILSSRVESQPDPKQVKGVDLDAPGSIAGIPVLEVDLDSFEDKPWRKTRCADL
SDYFNFGFNEDTWKAYCEKQKRLRQGLDPLPSGPATNRITVQQGRTGNLLDKEQDMAGPT
LIKTEFPLQQGGLRRMGPPPHRYEPRKLPGTIDVIGSQMIGITRVEGRRRDRDGLPEPSP
IQVLGTLPPPGDYSANQGKPPPSFAPPTAPPPLRPMGLPPNFMPPPPILPPPVSVGPPHI
PPPGFMPPHMPGLPPPMVVPPMDSGPPPGFPNRPPPMPFGYSTVVSYPPVSVPAPSWGPP
AGASVDKPGPIQGGAMVVGGPPGGGPGGPGGGPGGPGGGGPGGGGPGGNPGGGVGGIGGG
GGGGPGGPGGPGGLGPPGGGASPWDRERLPTSRDGHTRSPSVSSYVSEDERFRYWERETR
EFGREREMERSYEREQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQQQQ
QQREHREPAREHRDHRGDVREREHRERSYERERRHSSRDRGGGGGGGGGGGGSRDTEERH
RDRRHRDKDDGGGGGGGGVGGGGGGGGGSSAGGSGSSRHKSSRRRHHEDDDSDGHRRHKH
KKSKRSREDKEHDAGAAEERTADAEAGSAADDN
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggaggtgggggacgcggcaggcgacgccgtaggcttgggcggggaggacgaa
gagcaatggttatatggagatgaagatgccactgacaaagcggagggtgaacctgcgact
gttgggccgcccgcggacgtgcccgcggccgccgccgacgacaaaggcggcgacctccct
ttgaacggcaacgccgacgaaaccaacggcgatggcaccgaggccgctcccgctccgaat
gggactgaagatgccgaagacgacagcgatagtgatagcgatgacgacgacgtacaggtc
actattggggacatcaagacaggcgcgccacagtacaccggcgtgaaccctgaatatcaa
gcccggtgcacggccgtatggggcatcctcagcagtcgtgtagagtcccagccggacccc
aaacaggtgaagggcgtggatctggacgcgccggggagcatcgccggcattcctgttctc
gaggttgacctcgactcctttgaggacaagccctggcgcaaaaccaggtgcgcggatctg
tccgactacttcaactttggcttcaacgaggacacgtggaaggcgtactgcgagaagcag
aagcgtctgcgccagggactcgacccgctgcccagcggcccggccacgaaccgcatcacg
gtgcagcaagggcggacgggaaacctgctcgacaaggagcaagacatggccggaccgacg
ctcattaagaccgagttcccgctgcagcagggtggcttgcgacggatgggacccccgcct
cacagatatgaacccaggaagctgccgggcaccatcgatgtgatcgggagccagatgatc
ggcatcacccgcgtggagggcaggaggcgagatcgcgacggcctccccgagcccagcccc
atccaggtgctcgggacgctgccgccccccggagactacagtgcgaaccagggcaagcct
ccgccgtccttcgcacccccaacagccccgccgcccctgcggcccatgggcctcccgcct
aacttcatgccaccgccacccatcctgccgccacccgtgagtgtgggccccccgcacata
cctcctccagggttcatgccgccgcacatgccgggactcccgccgcccatggtcgtgcca
ccgatggacagcgggcccccgccaggcttcccgaaccggcccccgcccatgccgtttggc
tactccaccgtcgtctcgtacccgcccgtgtctgtccccgcgccctcgtggggccctccg
gccggagcgtccgtcgacaaaccgggccccatccagggcggcgccatggtggtgggcggc
ccccccggcggcggccccggcggcccaggtggcggccccggcggccctggcggcggcggc
cccggcggcggcggccccggcggaaaccccggcggaggtgtgggagggatcggaggcgga
ggcggaggaggcccgggaggccccggaggccccggaggcctgggcccgcccggcggaggg
gcgtcgccgtgggaccgggagcggttgcccacgtcccgggacggacacacgcgcagtccg
tccgtcagcagctacgtcagcgaggacgagcgcttccgctactgggagcgcgagacgcgc
gagttcgggcgcgagcgcgagatggagcgctcgtacgaacgcgagcagcaacagcagcag
cagcaacagcagcaacagcagcaacagcaacaacaacagcagcagcaacagcagcaacaa
caacagcaacaacaacaacaacatcagcagcagcagcaacaacaacagcagcagcagcag
cagcagcgcgagcaccgggagccggcgcgcgagcaccgggatcaccgcggcgacgtgcgg
gagagagagcaccgcgagcgaagctacgagcgcgagcggcggcacagcagccgcgaccgg
gggggcggcggcggcggcggcggcggcggcggggggagccgagacacggaggagcggcac
cgcgacaggcgccaccgcgacaaagacgacggaggaggaggaggaggcggaggagtggga
ggaggcggaggaggcggaggagggagcagcgcgggcggcagcggcagcagccgacacaag
tcgtcccgcaggagacaccacgaggacgacgactcggacggccaccggaggcacaagcac
aagaagtccaagcggagccgcgaggacaaggagcacgacgccggcgccgcggaggagcgc
accgccgacgccgaggccggctcggccgccgacgacaactga
DBGET
integrated database retrieval system
