Petromyzon marinus (sea lamprey): 116942934
Help
Entry
116942934 CDS
T09614
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116942934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116942934
Membrane trafficking [BR:
pmrn04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
116942934
Endosome - Golgi transport
Arf GTPase associated proteins
116942934
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
116942934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
ArfGap
PH
PH_11
PH_6
PH_8
RA
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
116942934
NCBI-ProteinID:
XP_032811301
UniProt:
A0AAJ7T4W9
LinkDB
All DBs
Position
16:9344472..9399813
Genome browser
AA seq
1627 aa
AA seq
DB search
MWSPDEADPQLPSTDPHPGEPWPDAEEKDEEEEDHPLEMMDNDIYEEFQKPEDTPARETI
SPSRHSPVTLSKSNALQSRPLPIPWQKIIRRQSAMVHDRVYEDISDIPAPRGEPSPRGME
DDGNTYEEVKYVEKRATKEQPQQQQRQRKAPVAMTRLPGHLTDASGSSVNEMGYSCSDDE
NRVYSLVMDVEGAGESERHVYSTGDGDGGGTFVLAPRPVSSGSIKAGWLDKQAPQGPYLF
QKRWVKSDGRYLYYYSNDKEMYSKGVLPLSAVQEVLTQTGGDAKFEVVTQTRAFVFRADS
EAERAGWVSALREAVQAQRSPEGGVASMLHSAGVIPGEALWGEQEKRGTLELRGKAKLYV
VCCSDRLWLFKSEQDFRTSLGITCIEMNVANVRAVEKKGIDLTTAFKTFSFMAENERERD
EWLETMRDSIATSLSHLDVAKQIWANEHNRRCADCGAAWPDWASVNLCVVICKRCAGEHR
NLGQTVSKVRSLKMDKNIWTKNLIELFQELGNAQVNKFWAASVPPSEAVDPSSEAERRRE
YVFAKYREGRYRCYHPCFGNESELNEALCRAVVTSNLLESMALVFCGASMLCCTGEPDGA
TPVQLAQRAGQRLQTELLLQNRNSTIPGATVPPSSPAIVSGYLYKTASTTKVLFDRKPKE
DFCRRWCVLENGALSYYESERSTTASGRVELQDLVSLAVSGAHSHNAHGMEHTFEICTKN
EKLFLFGSDCTATHREWILALLKALPWPGAEALCRRGFDRVGPLLCRDGRSQIRWQPAVF
ALHGAFLRFRAVVATPPAAIAQADAAFQRQLSGALGRASPSQEGFYEVGDDGGLDDGDYG
DGGEDGGGGDGDDLEGTEVVVNLQKLQEISVRMSDHVIEKYETLILVEKRRMLYVQSDTR
LNFAAWRLALENVARGGGRLLAEQQLLEGDVPVVLGRCMEYITQYGLTSDGIYRKSGTNS
RTHALLAEFWRDARAVRLREGEHSVDDVANVLKRFLRELQDGTVPAGARLAWTRAAADIR
DDGERLQRYKDLVKELPHVNRATLAALIEHLYCVQLNANSNQMSARNLGIVFGPTLFQSE
GASREEVIVVEALISNYLRVFEVDTERFQNVLHVIELIVKGLTVKQPSAQAGNLIVSVYF
ERKSTDTCISLKVSGLMTAQELLLEVLDLRQGQLQHNDSAMAVFEVSGELERPLHYKERV
LELLFHPDPQENYLLVKRHPDLEGMRRHLEEGRDKKEWQGPVRFREERSVHALLLQTGRF
NERFMALCAGRVLVFKDRKTNKAERDWSLQTVKTFLGIRRKLKPPTSFGLTLVQDKQRWF
LCFESHQELCDCLATMLNLKHKGDVWPPDGDFRSRTSSTTQKLGSQVLIPLRGSDLHRLT
LSNSMAFKEPENPTADERRPELDEPSLAAPWPQENDRAAAPPEPRPALAPPSRQDQVAAS
ATHAPLLPPSSRQGRVTASPAPSPPPPPPPGLRPQHKVLVPSPEQSQQVECSASSEPRQA
GRASPVTPEPAQQAPPTPKPRQQLAWKSPQRGTPVAPAPSAQPAGAGPGLRTAAVAAQTP
SAEPLSPVWPQASGPRMERHDSVKLNGQLAIDPVTAQKKNLHFNVMHELSSFLKQTVDLE
NVESSEA
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcgccggacgaagctgacccccagctgccctccacggatccgcaccctggcgag
ccctggcctgatgccgaggagaaggacgaggaggaggaggaccacccattggaaatgatg
gacaacgacatttacgaggagtttcagaagcccgaagacacgcctgcccgggaaacaatc
agccccagccgtcacagcccggtgactctgtccaagagcaacgccctgcagagccggccg
ctgcccatcccttggcagaaaatcatcaggaggcaatcggccatggtgcacgaccgcgtg
tacgaggacatatcggacatcccagctccacgcggggagccctccccgcgagggatggag
gacgatggcaacacgtacgaagaagtgaagtatgtggagaagcgggccacgaaggagcag
ccacagcagcagcagcgacagaggaaggctcccgtcgcgatgacgaggctccccggccac
ctgacggacgcatcgggaagctccgtgaacgagatgggttacagctgctccgacgacgag
aaccgtgtctacagcctggtcatggacgtggagggggcgggtgagtcggaacgccacgtc
tactcgacgggcgacggtgatggcggaggcaccttcgtcctggccccacggcccgttagc
agcggcagcatcaaggccggctggctcgacaagcaagcgccgcaggggccgtaccttttc
cagaagcgctgggtgaagagtgatggccgctacctttactactacagcaacgacaaggag
atgtactccaagggcgtcttgcctctgtccgccgtccaggaggtcctcactcagacagga
ggagacgccaaattcgaggtggtgacgcagaccagggccttcgtgttccgcgccgactcg
gaggcggagcgtgccggctgggtgtcagccctgcgcgaggccgtccaggcccagcggtcc
cccgaaggcggcgtggcctccatgctccacagcgccggagtcatccccggggaggccctg
tggggggagcaggagaagcgcgggaccctggagctgcgcggcaaggccaagctctacgtc
gtttgctgctccgaccgcctgtggctcttcaagagcgagcaggacttccgcacctcgttg
ggtatcacctgcattgagatgaacgtggcaaacgtgagggcggtggagaagaagggcatt
gatctcacgacggcgtttaaaacattcagcttcatggcggagaacgagcgcgagcgggac
gagtggctcgagacgatgcgggactcgatcgccacctcgctctcccacttggacgtcgcc
aagcagatctgggccaacgagcacaaccgccgctgcgccgactgcggcgccgcctggccc
gactgggcctccgtcaacctctgcgtcgtcatctgcaagcgctgcgccggcgagcaccgg
aatttggggcagacggtgtccaaagtgcgcagcctcaagatggacaagaacatctggacc
aagaacctcatcgagctcttccaggagctggggaatgcccaggtgaacaagttctgggcg
gcgtcggtgccgccgagcgaggccgtggatccgagctcggaggccgagcggcgccgcgag
tacgtcttcgccaagtaccgcgagggccgctaccgctgctaccacccgtgctttggcaac
gagagtgagctcaacgaggcgctgtgcagggcggtggtgacctccaatttgctggagtcg
atggcgctcgtgttctgcggagcgagcatgctgtgctgcacgggcgagccggacggcgcc
acaccggtgcagctcgcacagcgcgcgggacagcgcctgcagaccgagctcctgctgcag
aaccgcaactcgaccatacccggagccacggtgccgccctcatcaccggccatcgtctcg
ggctacctctacaaaacggcctccacgaccaaggtcctgtttgaccgcaagcccaaggaa
gatttctgccggcgctggtgcgtgctggagaacggagcgctcagctactacgagtcggag
cgcagcacgacggcgagcggccgcgtcgagctgcaggacctggtcagcctggccgtgagc
ggggcccactcgcacaacgcgcatgggatggagcacacctttgagatctgcaccaagaat
gagaagctcttcctgtttgggtcggactgcaccgccacgcacagggagtggatcctcgcc
ctcctcaaggccctgccgtggcccggtgccgaggccctgtgccgccgcggtttcgaccgc
gtgggccccctcttgtgccgcgacggccgaagccagatccgctggcagccggccgtgttc
gcgctgcacggcgccttcctgcgcttccgtgcggtcgtcgcgacgccgcccgccgcgatc
gcccaggccgacgcggccttccagaggcagttgtccggggcgctgggccgagcgtcgccc
tcgcaggagggcttctacgaggttggtgacgacggcggcttagacgacggcgactacggt
gacggtggcgaggacggcggtggcggcgacggtgatgacctcgagggcaccgaggtggtg
gtcaacctgcagaaacttcaggagatctctgtacgaatgtcggaccacgtcatcgagaag
tacgagacgctcatcctggtggagaaacgaaggatgctctacgtgcagagcgacacgcgg
ctcaacttcgccgcctggcgcctggcgctggagaacgtggcgcggggagggggtcgcctg
ctggccgagcagcagctgctggagggagacgtccccgtggtgctgggccgctgcatggag
tacatcacgcagtacgggctcacgtcggatggcatctaccgcaagagcggcaccaactcg
cgcacgcacgcgctcctcgccgagttctggcgagacgcgcgcgccgtgcgtctccgcgag
ggcgagcactccgtggacgacgtcgccaacgtcctcaagcgcttcctgcgcgagctgcag
gacggcaccgtgccggccggcgctcgcctcgcgtggacacgagccgccgcggacattcga
gatgatggggaacggctgcagaggtacaaggatctcgtcaaggagctgccgcacgtgaac
cgcgccaccctggcggctctcatcgaacatctctactgcgtgcagctcaacgccaactcg
aatcagatgtcggcgcggaacctgggcatcgtgttcggcccgacgctcttccagtcggag
ggcgcgagccgcgaggaggtcatcgtggtggaggcgctcatcagcaactacctcagggtg
ttcgaggttgatacggagcgtttccagaacgtgctgcacgtgatcgaactcatcgtcaag
gggttaacggtcaagcaaccttccgctcaagctgggaatttgatcgtctcggtttatttt
gagaggaagagcacggacacctgcatcagcctcaaggtgtcggggctcatgacggcacag
gagctactcctggaggtgctcgacctcaggcagggacagctgcagcacaatgactccgcg
atggccgtgttcgaggtgtctggggagctggagcggccgctgcactacaaggagagggtc
ctggagcttctcttccatccggatccgcaggagaactacctcctggtgaagaggcacccc
gacctcgaagggatgaggcgccaccttgaagaagggcgcgacaagaaggagtggcagggt
cctgtgcgcttccgggaggagcgcagcgtccacgctctgctcctgcagaccggcaggttc
aacgagcgcttcatggctctctgcgccgggagggtgctcgtgttcaaggacaggaagacc
aacaaggcggagagggattggagcctgcagacggtgaaaacgttcctgggaattcggagg
aagctgaaacctcccacgagtttcgggctgaccctggtgcaagacaaacagcggtggttt
ctgtgctttgagagccaccaggagctgtgcgactgcctggccaccatgctcaacttgaag
cacaagggcgacgtgtggcctcccgacggcgacttccgcagccgcacctcctccacgacc
cagaagcttggcagccaggttctcatccccctgcggggcagcgatttgcaccggctgacg
ctctccaacagcatggccttcaaggagcctgagaacccaactgcggacgagaggaggccc
gagctggacgagccctccctggccgcaccgtggccccaagagaacgacagagccgccgcg
ccccccgagccccgcccggccctcgcgcccccctcacgtcaggaccaggtggccgccagc
gcgacccacgctcctctgctgccgccatcctcccgtcaaggcagggtaacggcctccccg
gccccgtccccgccgccgccgccgccgccgggcctgcgcccgcagcacaaggtcctcgtg
ccgagcccggagcagtcgcagcaggtcgagtgttcggcgtcgagcgagccgcgccaggcg
ggtcgggcctcgccggtgacccccgagcctgctcagcaggcgccccccacgccgaaaccg
cggcagcagctcgcgtggaagtcgccgcagcggggcacgcccgtcgcccccgcgccgtcc
gcgcagccggcgggcgccgggccgggactgaggacggcggcggtcgcggcccagacgccc
tccgccgagccgctcagccccgtgtggcctcaggcctcggggcccaggatggagaggcac
gattccgtgaagctcaacggtcagttagcgatcgacccggtcaccgcccagaagaagaac
ttgcactttaacgtgatgcacgagctgagctcgttcctcaagcagaccgtggacctggag
aacgtggagagcagcgaggcgtga
DBGET
integrated database retrieval system
