Petromyzon marinus (sea lamprey): 116942948
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Entry
116942948 CDS
T09614
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116942948 (MMS19)
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116942948 (MMS19)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116942948 (MMS19)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
116942948 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_N
MMS19_C
HEAT_EF3_N
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
116942948
NCBI-ProteinID:
XP_032811330
UniProt:
A0AAJ7T4Z4
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All DBs
Position
16:9765266..9807178
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AA seq
1010 aa
AA seq
DB search
MAVPPGQQWSEHDVSGLLSLAVDGRDASAARQIAADVAEGKCSLLDLVDNMGVYLTHTET
EIRALATRLLSDVLQHNLRKLQPKELEVLALFYIDKLKDHYTVLPSVLQGFVALSSTPNL
PVGLEVQVLKAIFQDVHVQSLVYSDRRSVYNIIANFMETKEPELKGLGTDFTYGFVQATD
GEKDPRNLLISFRIAHGIVAHGYQLGSFVEELFEVTSCYFPIDFTPPTTDPHGITAEQLV
LGLRAVLSSTPKFAEFCLPLLLEKLDSDINSAKVDALETLISCCEVYTSVELAPSLPSLW
ASIRREVFQVGGSGKVEGAALRALRAVLVSLSRSVVPADGDDPLTPFLCQVHKDCRPPLL
GADMALVWPSAKLLQACCGASYRACSVTVSAILPLLLQQYEEHEQLAKRHTVLGILRGFL
SKCLDVASTEEVDGPIAPFVERLCALLYGAVTDAGVQLRCAGLATLAVLARLPACLAQAD
INCVVGHITRLLVEDSDEQVNGAAMQATSALAPLYTDAFLGLAVPRLLEILHSDDERSQK
ALQCMEHLCCHPCLTSALVPHLLSFLGSTGTEEAALAACATLLSVAEARSGVEDCRRLLY
TTAVPHLLRLTVCATLPSRRAAEFLRSKEVVASIAKVLSILSSRAAESSWADGIISQIVS
LFLDGDLSLLQDDGPAAVSFQPLHAESPTLQTQLTVLLSACLSFLPRTVAVPSQDRLLRA
LVHLCCCSPHEPTYSAAASCLAALLNKHPTGQELDSLLDDVLDRVHRGLLPSEPAAERRR
ALVSLLWLTKALVIRYHPKAPVLVNQLVQLLSDPELGAAAADGFALLTSDTDGELSPAAH
ADVRALFRQRVYTEHGRVLLLQLASALPDHKAHCLRALSHLLGSLPKQVVLSEMPTLCPV
LLDSLSSADATVQRSALSLLREALGDAPLTLSVHVDTLVTRLLLLGGSAAMRVRMGALQC
LCALVQLPAHVVLPHKQAVIHALGAALDDHKRLVRKEAVAARTAWYMLGC
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgccgccagggcagcagtggagcgagcatgatgtctccgggctgctgagcctc
gccgtggacggcagggacgcgtcggcggctcgccagattgccgcggatgtcgccgaagga
aaatgctcgctcctggacctggtggataatatgggggtctatctcacccacacggagact
gagatccgtgcgttggcgacccgcctgctctccgacgtcctacagcacaacttgcgcaag
ctgcaacccaaagagctggaagtcctcgccttgttctacattgacaaactcaaggaccat
tacaccgtcctgcccagcgtgctgcaaggatttgttgcattgagcagcacccctaatctt
cccgtggggctcgaggtgcaggtgctgaaggccatcttccaagatgttcacgttcagtcc
ctggtctactctgatcggcggagcgtctacaacatcatcgccaacttcatggagaccaaa
gagccagagctgaagggacttggtacggactttacgtacggcttcgtccaggcaacggac
ggggagaaggacccacgcaatctcctcatctcgttccgtatcgcccacggcatcgtggca
catgggtaccagctcgggagctttgtggaagaactcttcgaagtgacctcctgctacttc
cccatcgacttcacgccgccgaccaccgacccacatggcatcaccgctgagcagctggtc
ctgggactccgggctgtgctcagctccacaccaaagtttgccgagttctgcctgccgctg
ctgctggaaaagttggactcggacatcaacagcgctaaagtcgatgccctggagacgctg
atttcttgctgtgaagtgtacacgtccgtggaacttgcaccctccctccctagcctgtgg
gcctccatcagacgagaggttttccaggtgggcggcagcggcaaggtggagggcgccgcc
ctgcgggccctgcgggccgtcctcgtctccctttcgcgctcggtggtgcccgccgacggc
gacgaccccctgactcccttcctctgccaggttcacaaagattgccggcctccgctcttg
ggcgccgacatggccctggtgtggccgagcgccaagctgctgcaggcgtgctgcggggcg
tcgtaccgcgcgtgttccgtcactgtctcggccatcctgcctctgctgctgcagcagtac
gaggagcacgagcagctggcaaagcggcacacggtgctgggcatcctgcgtggattcctc
agcaagtgcctcgacgtcgcgtccacggaggaagtggacggcccgatcgccccgttcgtc
gagcgactctgcgcgctgctgtacggggccgtgacggatgccggcgtgcagctgcggtgc
gccggtctcgccaccctcgccgtcctggccaggctgcccgcttgcctcgcgcaggcagac
atcaactgtgtcgtgggccacatcacccggctgcttgtggaggactctgacgagcaagtc
aatggtgctgccatgcaggcgacctctgccctggctcctctttacactgacgccttcctt
ggcctggctgttccgagactgctcgagattctacactcagatgatgagcgctcccagaag
gccttgcagtgcatggagcacctgtgctgccacccgtgcctcacctccgccctcgttccg
cacctcctgtccttcctcggatccacgggcacagaggaagctgcgctggcggcgtgcgcc
accctcctgtcggtggccgaggctcggagcggagtcgaggattgccggcgcctcctctac
accacggccgtgccgcacctcctgcgcctgaccgtgtgtgccacgctcccgtcgagacgc
gccgcagaattcttgcgctccaaggaggtcgtggcttccatcgcgaaggtcctgagcatc
ttgtcgagccgggcggcggagagcagctgggcggacggcatcatttcccaaatcgtgtcc
ttattcctggacggagacctgagcctcctgcaggacgatggtccggccgcagtctccttc
cagccgctccacgcggaatctccgacgctgcagacgcaactgacggtgctcctctccgcg
tgcctctccttcctaccccgaacggtggcggtgccatcccaggaccgactgctgcgggcg
ctcgtgcacctgtgctgctgctcgccgcacgagcccacctactcggccgcggccagctgc
ctcgcggccctgctcaacaaacacccaaccgggcaggaattggattccctgctggacgac
gtcctggacagagttcatcgcggccttctgccctccgagcccgccgctgagcggaggaga
gccctcgtctcgctgctctggctcacaaaggcgctggtgataagatatcatcccaaggca
cccgtcttggtgaaccagctcgtacagctgctgagcgacccggagctgggggcggcggcg
gccgatggcttcgcgctgctgacgagcgacacggacggagagctgagccccgcggcgcac
gcggacgtgcgcgcgctcttccgccagcgcgtgtacacggagcacgggcgcgtgctgctc
ctgcagctcgcttccgccctgcctgatcacaaggcccactgcctgagggcgctgtcacat
ctactgggatccctgcccaagcaggttgtcctctctgaaatgcccacgctgtgccccgtg
ctgctggactcgctgagctcggcggacgcgacggtgcagcggtcggcgctctccctgctg
cgggaggcgctgggcgacgcgccgctcaccctgagcgtgcacgtcgacacgctcgttacg
cgcctcctgctgctcggcggcagcgcggccatgagagtgaggatgggagcccttcagtgc
ctctgcgcgttggtgcagctgccagcgcacgtggtgctgccccacaagcaggcggtaata
cacgcgctgggcgcggcactggacgaccacaaacggctggtgcgcaaggaggccgtggca
gctcggaccgcgtggtacatgctgggctgctga
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