Petromyzon marinus (sea lamprey): 116942992
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Entry
116942992 CDS
T09614
Name
(RefSeq) ras-related protein Rab-33B-like
KO
K07920
Ras-related protein Rab-33B
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116942992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116942992
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmrn04147
]
116942992
04031 GTP-binding proteins [BR:
pmrn04031
]
116942992
Membrane trafficking [BR:
pmrn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
116942992
Others
Specific organelles associated proteins
Auto phagosome
116942992
Exosome [BR:
pmrn04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
116942992
GTP-binding proteins [BR:
pmrn04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
116942992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
SRPRB
ATP_bind_1
G-alpha
bMG3
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
116942992
NCBI-ProteinID:
XP_032811451
UniProt:
A0AAJ7T4Y5
LinkDB
All DBs
Position
16:complement(13077654..13081523)
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AA seq
254 aa
AA seq
DB search
MRSGRKEAGASAMSGPRCPGVEAPGADLLSSVWSTSSAETSLSLGSVRTRIFKIIVIGDS
NVGKTCLTFRFCGGLFPERTEATIGVDFRERTVELEGERIKLQLWDTAGQERFRKSMVSH
YYRNAHAVVFVYDVTSRPSFLSLPSWLAECERHLSSSDAPRVLVGNKCDLKDKVEVPTSL
AQKFADAHGMAHFETSAKEQEGTGDHAEAIFLTLAHRLRSQRTMAMPRLLAAQDTAINLA
DDKQGADNGSYCYC
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccgggcggaaagaggccggcgcttctgcgatgtcggggccgcggtgcccgggc
gtggaggccccgggcgcggatttgctctcctccgtgtggtccacctcgtccgccgagacg
tcgctgtcgctgggctccgtgcgcaccaggatcttcaagatcatcgtcatcggagactcg
aacgtgggcaagacgtgtctcactttccgcttctgcggcggcctctttcccgagcgtacg
gaggcgactatcggcgtggattttcgcgagaggacggtggagttggagggcgagaggatc
aagcttcaactttgggacacggccggccaggagcgcttccgtaagagcatggtatcgcac
tactaccgcaacgcgcacgccgtggtgttcgtctacgacgtgacaagccgaccctccttc
ctcagcctgccgagctggctcgccgagtgcgagcggcatctcagttcatccgacgctcct
cgcgtcctcgtgggaaacaagtgcgacctcaaagacaaagtggaggtcccaacatccctg
gcccagaaatttgcagatgctcacggaatggcacactttgagacatccgccaaggagcaa
gagggcacaggcgatcatgccgaggccatcttcctgacactcgcccacaggctgcgcagc
cagcgtaccatggccatgccgcgtctattggctgcccaggacacagccataaacctggcc
gatgacaagcaaggcgccgacaatgggtcctactgctactgctga
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