Petromyzon marinus (sea lamprey): 116943025
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Entry
116943025 CDS
T09614
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116943025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116943025
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116943025
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116943025
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116943025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
116943025
NCBI-ProteinID:
XP_032811518
UniProt:
A0AAJ7T7E0
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All DBs
Position
16:complement(14282891..14307520)
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AA seq
919 aa
AA seq
DB search
MFAQKPFGSGFGTSAGSGVLAAPSGPFGTSGMFGTGSAFGQPANSTGGTTGGFGFGAAPN
GGLFGNVPSGGGGLFSNAQQNTGGVFGQNKPNTFTGFGGNTGSLFGGTGTSGSLFGGGVA
TANAGSVFGAPFGAATPTGTTIKFTPVSGTDSMIKNGLNTQISTQHQCITAMKEYEAKSL
EELRLEDYAANRKGPQAGCLFMSPANNATTTSGLFGTGNTGTNNNNIAGSTGLTFGQKAG
FGTGFTTGGTGMFGQPQHQQQQAPSVFGPKPFGLVAPMNGGGITQGGTAPGFSFQASGFG
PGATNTAGVFGNSVPVQQGCIFGAGSNTATAFGSNGGLFPSNNTLFNNSSSGLFHNKPTA
GFSMPTANVPTFGPLGAGSFCAKPGGLTLGNTASGQLFGFPSNNGGSGILQNKPNAGVQP
GTLAGMFGMNSGQNMLFGVPQPKLAGLFSSNPFSTSNPTLVLGNSSVPLDINAQQLQVQQ
QVQALALSPFGDSPLFSNPTSDLAKKQQLLKPTSTTTQKSLVTPSHYRLSPRATARVRPK
ALVPGGAPRATPGPPRTQMAPLHLQGLNGDDGQEEDEARAVQQTFTPRKSVKKLVIVAAK
TPPPPSPSTPSSPLATSPTQRHQEADDLAPQSVYPEPAERPSQERHQEGDHHDEVDGKLG
GGCDGGGTNFREARTGPQRSPPHSPGPTNGPAVCHSNGLSSPDGSVGEFSSKDAWGSEQE
SRERDTQKQPHPAGMVLTRAGYFTIPSLEELGRMVDEDGVCTVTNFVIGRVGYGSILFPG
RMDVSGLDLDAIVHIRRKEVIVYPDDGSKPRVGQGLNRRAEVTLDGVWPTDKTSRTPIRS
PERLQRMEYGARLEKAALRQGARFLEYRPESGSWVFEVNHFSAYGLAIEDEIEQQKEDER
RLVVGVAEGLTRAWHAGQT
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacaaaaaccctttggaagtggattcggcaccagcgcaggcagtggcgtctta
gccgctccctcggggcccttcggcacaagtgggatgtttggaacaggtagtgctttcgga
cagcccgccaattcgacgggtggcacaacaggagggttcggctttggcgcagctccgaat
ggggggctgtttggaaacgtccccagtggaggagggggacttttctcaaatgcccagcag
aacacaggtggtgtgtttgggcagaacaagccaaacacattcacagggtttggcggaaac
acagggagcctttttggtggcacgggcaccagcgggagcctgtttgggggtggcgtggca
acggcgaatgcgggcagcgtgttcggggcaccgttcggtgcggcgacgccaaccggcacc
accatcaagttcacccccgttagcggcactgacagcatgatcaagaatgggctcaacacg
cagatctccacccagcaccagtgcatcactgccatgaaggagtacgaggccaagtcgctt
gaggagttgcggttggaggactacgctgccaaccgcaagggcccacaagccggctgtctc
ttcatgtcgcctgccaacaacgccaccacgacctctgggctctttggcactggcaacaca
ggcaccaacaacaacaacatcgctggcagcacaggcctcacctttggacaaaaagctggg
tttggcaccggtttcacgactggtggcacaggaatgtttgggcaacctcagcatcagcag
cagcaggcacccagcgtgtttggccccaagccgtttgggctcgtggcgcccatgaacggt
ggcggcatcacacagggcgggacggcaccaggcttctccttccaggcctcgggattcggg
ccgggcgccactaacactgcgggtgtatttgggaacagcgtgccggtgcagcaaggctgc
attttcggtgctggaagcaatactgccacagccttcggatccaacggagggctcttccct
agcaacaatactctgtttaacaactcttcttcgggtttgtttcacaacaagccaacggcg
ggcttctccatgcccacggcaaacgtgccgacttttggaccgctcggagcgggatcgttt
tgcgccaagcccggcggcctgaccctcggcaacactgcatccggccagcttttcgggttt
cccagcaacaacggcggatctggcattttgcagaacaaaccgaacgcaggggtgcagcct
ggcacccttgccggcatgttcggtatgaactcgggacagaacatgctgtttggcgttccc
cagcccaaactggcgggcctcttcagcagcaaccctttcagtacctccaaccccactctt
gtgcttgggaacagttctgttcctcttgacattaatgcacagcagctgcaggtgcaacag
caggtgcaggcgttggcgctgtcgcccttcggagactctccactcttcagcaaccccact
tctgacctcgccaagaagcagcagctgctgaagcctacgagtaccacgacgcagaagtca
ctggtcactccgagccactaccgcctgtccccccgcgccactgcgcgcgtgcggcccaag
gcactggtgccaggaggggccccgagggcaacccccgggcccccacgcacgcagatggca
cccctccacctgcagggcctgaacggggatgatgggcaggaggaggacgaggcaagggcg
gttcagcagacattcaccccacggaagagtgtgaagaagctggtgattgtggcggccaag
acgcctcctcctccctctccatcaactccgtcctccccgctggccacctcgccaacgcag
cgccatcaagaagccgatgacctggccccgcagtctgtttaccccgagccggcagagcgc
ccctcgcaggagagacaccaggagggagaccaccacgatgaggtggatggcaagctgggt
ggtggttgcgatggtggtgggacaaatttccgtgaggcacggacgggcccccagcgctcg
cccccacactctcccggtccgaccaacggtcccgctgtctgccacagcaacggtctgagc
tcccccgatggatcggtgggagagtttagctctaaggacgcgtggggcagcgagcaagag
agcagagagcgggacacccagaagcagcctcaccccgcaggcatggttctgactcgggcc
gggtacttcaccatcccctcactggaggagctggggaggatggtggacgaggatggggtc
tgcaccgtcactaacttcgtcatcggacgcgttggctacggctcgatactcttccccggc
cgtatggacgtgagcgggctcgacctggacgccatcgtgcacatccgccgcaaggaggtc
attgtttacccggacgacggcagcaaaccccgcgtgggccagggcctcaacaggcgagcg
gaggtgacgctggacggggtgtggcccacggacaagacgagccgcacgccgatccgcagc
cccgagcggctgcagcgcatggagtacggggcgcggctggagaaggcggcgctgcgccag
ggcgcgcgcttcctcgagtaccggcccgagagcggctcctgggtcttcgaggtgaaccac
ttttctgcttacggtctcgccatagaagacgagattgagcagcagaaggaagatgagaga
cggctggtggtgggagtggcggaggggttgacgagggcttggcacgctgggcagacatag
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