Petromyzon marinus (sea lamprey): 116943053
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Entry
116943053 CDS
T09614
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04080
Neuroactive ligand-receptor interaction
pmrn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116943053
04082 Neuroactive ligand signaling
116943053
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
116943053
Ion channels [BR:
pmrn04040
]
Ligand-gated channels
GABA-A
116943053
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
116943053
NCBI-ProteinID:
XP_032811577
UniProt:
A0AAJ7T7L1
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Position
16:15149591..15188662
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AA seq
560 aa
AA seq
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MRILQQKQQRERWEGRGGGAKIPQPHPSLLYPAHSHIHLTHSYPAHNPHVQHTPILHTTH
TNTTHHHSPTQLPPPPTHTPLPYTTHTPLRCTTCPDRGNPNLRSCCTCAAADAAASVLGV
RPSASDCVSLAQRSGGRRRGPCRGHSRRETRGGDTRRDTRRDTGRSRQRARATEVKTDIY
VTSFGPVSDTDMEYTVDVFFRQSWRDLRLKFNGSMRILPVNNMMVSHLWTPDTFFYNSKK
SVAHNITTPNKLLRICDDGSLLYTMRLTINAECPMILEDFPMDTHACPLKFGSYAYTSSE
VFYTWTHGPANSVIVAEDGSRLNQYNLINHTVGSELSRSSTGVYTVMTTRFHLRRNIGYF
VIQTYLPCIMTVLLSQVSFWLNREAVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAM
DWFIAVCYAFVFSALIEFATVNYFTKRAWAWNGKFPAPSKKKDAVTLIKKRKNAYTTGLC
PAGHRTLLAREAALLSVSQKVVLHHGQHDSRPLDYKKTYNSVSKIDKLSRIVFPILFGIF
NLVYWATYLNRETHASGALP
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcctgcagcaaaagcagcagagagagagatgggaggggcggggcgggggggcg
aagatcccccaacctcacccctcgctcctttatcctgcacactcacatattcatctcaca
cactcctaccccgctcacaatccacacgtacagcacacccccatactccacacaacccac
acaaataccacacaccaccactctcccacacaactccccccccctcctacacacacacca
ctaccctacacaacccacacacctctacgctgcaccacatgccccgaccgtgggaaccct
aaccttcgctcgtgctgcacgtgtgctgctgctgatgctgctgcttcagttctcggggtc
cgcccctcagcgtctgattgtgtttcgctcgcacaacgaagcggtggacggcggcgcggt
ccctgtcggggacactccagacgggagacacgaggcggagacaccagacgggacacaaga
cgggacacagggaggtcgagacagcgagcgagagccactgaggtgaagaccgacatctac
gtcacaagctttgggcccgtgtcggatactgacatggagtacacggtggatgtgtttttc
cgtcaaagctggagggacttacgactcaaattcaacgggtccatgaggattctgcctgtg
aacaatatgatggtgtctcacctatggacgccagacacattcttctacaacagcaagaag
tccgtggcacacaacatcaccactcccaacaaactcctgaggatctgcgatgacggatct
ctgctgtacaccatgcggctgactattaatgcagagtgcccgatgatattggaggatttc
ccgatggacacgcacgcctgcccactcaagtttgggagctatgcatacactagctccgaa
gtattctacacgtggacgcacggccccgccaactctgtaatcgtggcagaggatggatct
cgactcaaccagtacaacctgatcaaccacacggtgggcagcgagctcagccgctccagc
accggagtgtacacagtgatgaccacccgcttccacctgcgcagaaatatcggctacttc
gtgatccagacgtacctgccgtgcatcatgaccgtgctcctttcccaggtctccttctgg
ctcaaccgcgaggcggtgccagcacgcactgtgttcggtgtcaccacagtgctcaccatg
acgacgctcagcatcagcgcacgcaactccttgcccaaggtggcgtatgcgacggcaatg
gactggttcatcgccgtatgctatgccttcgtcttctcagcgctcatcgagttcgccacc
gtcaactacttcaccaagagagcctgggcctggaatgggaaatttcctgcgccatcgaag
aaaaaggacgcggtgactttgatcaaaaagcgcaaaaacgcctataccacaggcctgtgt
cccgcgggccaccgcacgctgctggccagggaggcagctctgctcagcgtctctcagaag
gtcgtgctgcaccacggacaacatgacagcagacccctcgactacaagaaaacctacaac
agcgtgagcaagattgacaagctctcccgcatcgtgtttcccatcctttttggaatcttc
aacctggtgtactgggccacgtacctgaaccgtgagactcatgcaagtggtgcgttgcct
tag
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