Petromyzon marinus (sea lamprey): 116943123
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Entry
116943123 CDS
T09614
Name
(RefSeq) neuronal PAS domain-containing protein 3-like
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116943123
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116943123
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
Nop14
Motif
Other DBs
NCBI-GeneID:
116943123
NCBI-ProteinID:
XP_032811591
UniProt:
A0AAJ7T794
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Position
17:complement(3029129..3140704)
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AA seq
954 aa
AA seq
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MIRIFPDFGFQATMEGGGGSAPGATGPARVVDSGNGAPPNVLGLPSYQQRFLRFEKGQWH
VMGQKVPRLQALRKEKSRDAARSRRGKENFEFYELAKMLPLPGAITSQLDKASIIRLTIS
YLKMRDFAAHGDPPWHLHMDGPPPNTSVKAIGQKRRSSSALAMEVFEHHLGSQILQSLDG
FVFVLNFDGRFLYISETVSIYLGLSQVEMAGSSAFDYVHPADHSELAEQLGMKLPPGRNA
SLQAAAEDGASSASSSQAETPEPMEPTTPTMLNPDESLNRSFFIRMKSTLTKRGVHIKSS
GYKVIHLTGRLRVRSALPYGMSAPTQIMGMVALAHALPPPTMNEIRIDCQMFVTRVNMDL
KIVYCENRISDYMDLAPADLVGRSCYHFIHAEDVEGIRQNHIDMLNKGQCVTKYYRWMQK
SGGYVWIQSSATIAINTKNINEKTIVWINYVLSDPEYKDCPMDVQQLPHLYKKSSESSET
SDSDSDSKGNSDDRDSPKPNQRHGQSRSGDSWDPEGTRSGGRRSGANMHHEEGSSSSLGE
EEEEEEEEEEEEEVEEEEGEESSEEKSSESSYCEEQGYGANERCVSLRSGGVKVEEFGLR
RPDVVGIVGREGMDGYDGTGQTNAQQSTKRPKRKKHKRQRPNCTPLQSLPSPREEEMDSR
RYSRHSASSHNQVKMEESINFEDSSIWDYPPNREISRNELPYSMTGPSQAKHYSSGHGAQ
SSLHVAIPDSVLTPPGPDSATSQKSVFTASPNPAAPNSASTLLASDPLSPPLSASPRDGK
VGQAVSVSPSGLYDVDALQRLHAGGAPGGGGAGAAGAGGAASSDGDASPPAQRLYTTGAI
RYAPADSASSFAGDGGAQLGTQPSMGLAGCGGGGGGGGVGYHGLDGKTPMEVLYQRMQQM
GVPTPFAGSVAGGGLSHLSAGAVFTTADGYLATIPFSLYSNGSQPPQTPDQDDD
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggattttcccagactttggctttcaagccacgatggaaggcggtggtgggtcg
gctccgggcgctactggcccggccagagtggtggactctggcaacggagcgcctcccaac
gtgctcggcttgccctcctaccagcagagatttttgagatttgaaaagggacaatggcac
gtgatggggcaaaaggttcccaggcttcaggcgctgcgcaaggagaagtcacgggatgcg
gctcggtcgcggcgcgggaaggagaacttcgagttctatgagctcgccaagatgctgcct
cttcccggggccatcacgagccagcttgacaaggcctcaataatccgactcaccatcagc
tacctgaagatgcgagactttgccgcgcatggagacccaccctggcacctgcacatggac
ggccctccgcccaacacctccgtcaaagcgatagggcagaagaggagaagctccagtgcc
ctggccatggaagtgtttgagcatcatctcggcagccaaatcctccagtctctggatggt
ttcgtgtttgtgctgaatttcgatgggaggttcctttacatatcagagacggtgtccata
tacctgggactctctcaggtggagatggctgggagcagcgccttcgattacgtgcaccca
gcggaccactccgagctggccgagcagctggggatgaaactgcctccggggaggaatgcc
tccctgcaggcggccgcggaggacggcgccagctcagcctcctcctcgcaagcagagacg
ccagagccgatggagcccaccacgcccaccatgctcaacccagacgagtcgctgaatcgc
tccttcttcatccgcatgaagtccactctgaccaagcgtggggtgcacatcaagtcctcg
gggtacaaggtgatacacctgacagggaggctgcgggtgcgttccgcgctgccctacggc
atgagcgcgccgacgcagatcatgggcatggtggccttggcgcacgccctgccgccaccc
accatgaacgagatacgcatcgactgccagatgttcgtcacccgagtcaacatggatctc
aagatcgtctactgtgagaacaggataagtgattacatggacctggcgccggccgacctg
gtggggaggagctgctaccacttcattcacgccgaggacgtggaggggattcgccagaac
cacatcgacatgctgaacaaggggcagtgtgttaccaagtactaccgctggatgcaaaaa
agtggcggttacgtttggatacaatcaagcgctacgatcgccatcaacacaaagaacatc
aatgagaaaaccattgtatggatcaactatgttctcagtgaccccgagtacaaggactgc
cccatggacgtgcagcaactgccacacctctacaagaaatcctcagagtcttcggaaaca
tctgattctgactcagactccaaggggaattcagatgatcgcgacagccccaagcccaat
cagcggcacggtcagtcccgcagcggcgacagctgggacccggagggaaccaggagtggc
gggcggcgctcgggagccaacatgcaccacgaggagggcagctccagcagcctgggggag
gaggaagaggaggaggaggaagaagaagaagaggaggaagtggaggaagaggagggggag
gagagcagtgaggagaagagctcggagagctcttactgcgaggaacaaggctacggcgcc
aatgagcgctgcgtgtctttgcgttccggcggcgtcaaagtcgaagagttcggcctgcga
cggccggatgtggtgggcatcgttggccgggaaggcatggatggttatgacggcaccggg
cagacaaacgcacagcagtccacaaagcgccctaagaggaaaaagcacaagagacaacga
ccaaattgcactcctctgcaaagcttacccagtccccgtgaagaggagatggatagcaga
cggtattccagacactcagcctcgtcacacaatcaggtgaaaatggaagagtctattaac
ttcgaagacagcagcatttgggactaccctcctaacagggagatttcacggaacgagttg
ccctacagcatgaccggtccctcccaggcaaagcactactcttctggccacggggcgcag
tcgagtttgcacgtggccatccccgactcggttctgaccccgccgggccccgacagcgcc
acgagtcagaagtccgtgttcacagcctccccgaaccccgccgcacccaactccgcgagc
actttactggcgtccgaccccctgtcccctccgctgtcggcctcgccgcgcgacggcaaa
gtgggccaggcggtgagcgtcagcccgtcgggcctctacgacgtcgacgccctgcagcgg
ctgcacgccggcggcgccccgggcggcggcggcgccggggcggcgggggcggggggggcg
gcttcgagcgacggcgacgcgagcccccccgcacagcgcctctacacgacgggcgccatc
cgctacgcgccggccgactcggcctcctcgttcgccggggacggcggggcccaactgggc
acgcagcccagcatggggctggcggggtgcggcggcggcggcggcggcggcggcgttggg
taccacggacttgacggcaagacgcccatggaggtgctttaccagcgcatgcagcagatg
ggggtgcccacgccgtttgccgggtcggtggcgggcggcgggctctctcacctgtcggcg
ggagcggtgtttacgaccgcggatggctacctggccacgattcccttctcgctctacagc
aatggctcgcagcccccacagacgccagaccaggatgatgactaa
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